Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:31:15 (1058920): wrapper (7.7.26015): starting
13:31:15 (1058920): wrapper: running run_atlas (--nthreads 9)
[2026-03-08 13:31:16] Arguments: --nthreads 9
[2026-03-08 13:31:16] Threads: 9
[2026-03-08 13:31:16] Checking for CVMFS
[2026-03-08 13:31:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 13:31:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 13:31:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 13:31:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 13:31:17] 2.13.3.0 12213 177233 321492 157048 1 507 39359659 40960001 34051 16776704 0 1227399963 99.697 981784543 34905 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-08 13:31:17] CVMFS is ok
[2026-03-08 13:31:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 13:31:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 13:31:17] Further information can be found at the LHC@home message board.
[2026-03-08 13:31:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 13:31:17] Checking for apptainer binary...
[2026-03-08 13:31:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 13:31:17] Running /usr/bin/apptainer --version
[2026-03-08 13:31:17] apptainer version 1.4.5-2.el9
[2026-03-08 13:31:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 13:31:17] c7-3-35.aglt2.org
[2026-03-08 13:31:17] apptainer works
[2026-03-08 13:31:17] Set ATHENA_PROC_NUMBER=9
[2026-03-08 13:31:17] Set ATHENA_CORE_NUMBER=9
[2026-03-08 13:31:17] Starting ATLAS job with PandaID=7032959037
[2026-03-08 13:31:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 19:27:53]  *** The last 200 lines of the pilot log: ***
[2026-03-08 19:27:53] 2026-03-08 23:26:47,229 | INFO     | extracted standard info from prmon json
[2026-03-08 19:27:53] 2026-03-08 23:26:47,229 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 19:27:53] 2026-03-08 23:26:47,230 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 19:27:53] 2026-03-08 23:26:47,230 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 19:27:53] 2026-03-08 23:26:47,230 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 19:27:53] 2026-03-08 23:26:47,242 | INFO     | fitting pss+swap vs Time
[2026-03-08 19:27:53] 2026-03-08 23:26:47,243 | INFO     | sum of square deviations: 13068169586.514294
[2026-03-08 19:27:53] 2026-03-08 23:26:47,305 | INFO     | sum of deviations: -57519192422.997116
[2026-03-08 19:27:53] 2026-03-08 23:26:47,305 | INFO     | mean x: 1773001757.5373564
[2026-03-08 19:27:53] 2026-03-08 23:26:47,305 | INFO     | mean y: 2619571.807471264
[2026-03-08 19:27:53] 2026-03-08 23:26:47,306 | INFO     | intersect: 7806438506.277321
[2026-03-08 19:27:53] 2026-03-08 23:26:47,306 | INFO     | chi2: 2.6269305815129456
[2026-03-08 19:27:53] 2026-03-08 23:26:47,306 | INFO     | sum of square deviations: 12512944536.507225
[2026-03-08 19:27:53] 2026-03-08 23:26:47,324 | INFO     | sum of deviations: -33746928630.192406
[2026-03-08 19:27:53] 2026-03-08 23:26:47,324 | INFO     | mean x: 1773001605.037901
[2026-03-08 19:27:53] 2026-03-08 23:26:47,324 | INFO     | mean y: 2626028.3994169096
[2026-03-08 19:27:53] 2026-03-08 23:26:47,324 | INFO     | intersect: 4784342949.773392
[2026-03-08 19:27:53] 2026-03-08 23:26:47,325 | INFO     | chi2: 1.9412380973684684
[2026-03-08 19:27:53] 2026-03-08 23:26:47,325 | INFO     | current chi2=1.9412380973684684 (change=26.10242116674289 %)
[2026-03-08 19:27:53] 2026-03-08 23:26:47,325 | INFO     | sum of square deviations: 11973673273.999966
[2026-03-08 19:27:53] 2026-03-08 23:26:47,347 | INFO     | sum of deviations: -33090908707.538452
[2026-03-08 19:27:53] 2026-03-08 23:26:47,347 | INFO     | mean x: 1773001452.5384614
[2026-03-08 19:27:53] 2026-03-08 23:26:47,347 | INFO     | mean y: 2626213.926035503
[2026-03-08 19:27:53] 2026-03-08 23:26:47,347 | INFO     | intersect: 4902561919.678237
[2026-03-08 19:27:53] 2026-03-08 23:26:47,348 | INFO     | chi2: 1.940418543730422
[2026-03-08 19:27:53] 2026-03-08 23:26:47,348 | INFO     | current chi2=1.940418543730422 (change=0.04221808953561154 %)
[2026-03-08 19:27:53] 2026-03-08 23:26:47,348 | INFO     | right removable region: 337
[2026-03-08 19:27:53] 2026-03-08 23:26:47,348 | INFO     | sum of square deviations: 12512936606.507225
[2026-03-08 19:27:53] 2026-03-08 23:26:47,477 | INFO     | sum of deviations: -114342034009.38773
[2026-03-08 19:27:53] 2026-03-08 23:26:47,477 | INFO     | mean x: 1773001910.037901
[2026-03-08 19:27:53] 2026-03-08 23:26:47,477 | INFO     | mean y: 2635069.1836734693
[2026-03-08 19:27:53] 2026-03-08 23:26:47,477 | INFO     | intersect: 16204159225.458557
[2026-03-08 19:27:53] 2026-03-08 23:26:47,477 | INFO     | chi2: 1.034127195876931
[2026-03-08 19:27:53] 2026-03-08 23:26:47,478 | INFO     | current chi2=1.034127195876931 (change=60.6336306275235 %)
[2026-03-08 19:27:53] 2026-03-08 23:26:47,478 | INFO     | sum of square deviations: 11973657413.999966
[2026-03-08 19:27:53] 2026-03-08 23:26:47,494 | INFO     | sum of deviations: -111304551188.23077
[2026-03-08 19:27:53] 2026-03-08 23:26:47,495 | INFO     | mean x: 1773002062.5384614
[2026-03-08 19:27:53] 2026-03-08 23:26:47,495 | INFO     | mean y: 2634192.4408284025
[2026-03-08 19:27:53] 2026-03-08 23:26:47,495 | INFO     | intersect: 16484081089.018244
[2026-03-08 19:27:53] 2026-03-08 23:26:47,495 | INFO     | chi2: 1.0150310962976834
[2026-03-08 19:27:53] 2026-03-08 23:26:47,495 | INFO     | current chi2=1.0150310962976834 (change=1.8465909856528036 %)
[2026-03-08 19:27:53] 2026-03-08 23:26:47,495 | INFO     | left removable region: 20
[2026-03-08 19:27:53] 2026-03-08 23:26:47,496 | INFO     | sum of square deviations: 9877711220.744478
[2026-03-08 19:27:53] 2026-03-08 23:26:47,518 | INFO     | sum of deviations: -54340285904.20503
[2026-03-08 19:27:53] 2026-03-08 23:26:47,518 | INFO     | mean x: 1773002032.0283911
[2026-03-08 19:27:53] 2026-03-08 23:26:47,518 | INFO     | mean y: 2631616.9116719244
[2026-03-08 19:27:53] 2026-03-08 23:26:47,518 | INFO     | intersect: 9756453648.762667
[2026-03-08 19:27:53] 2026-03-08 23:26:47,518 | INFO     | chi2: 0.22770339342318424
[2026-03-08 19:27:53] 2026-03-08 23:26:47,519 | INFO     | current memory leak: -5.50 B/s (using 317 data points, chi2=0.23)
[2026-03-08 19:27:53] 2026-03-08 23:26:47,519 | INFO     | could have reported an average CPU frequency of 3190 MHz (15 samples)
[2026-03-08 19:27:53] 2026-03-08 23:26:47,519 | INFO     | ..............................
[2026-03-08 19:27:53] 2026-03-08 23:26:47,519 | INFO     | . Timing measurements:
[2026-03-08 19:27:53] 2026-03-08 23:26:47,519 | INFO     | . get job = 0 s
[2026-03-08 19:27:53] 2026-03-08 23:26:47,519 | INFO     | . initial setup = 16 s
[2026-03-08 19:27:53] 2026-03-08 23:26:47,520 | INFO     | . payload setup = 22 s
[2026-03-08 19:27:53] 2026-03-08 23:26:47,520 | INFO     | . stage-in = 0 s
[2026-03-08 19:27:53] 2026-03-08 23:26:47,612 | INFO     | . payload execution = 21230 s
[2026-03-08 19:27:53] 2026-03-08 23:26:47,612 | INFO     | . stage-out = 7 s
[2026-03-08 19:27:53] 2026-03-08 23:26:47,612 | INFO     | . log creation = 0 s
[2026-03-08 19:27:53] 2026-03-08 23:26:47,612 | INFO     | ..............................
[2026-03-08 19:27:53] 2026-03-08 23:26:47,665 | INFO     | number of running child processes to parent process 1068258: 1
[2026-03-08 19:27:53] 2026-03-08 23:26:47,665 | INFO     | maximum number of monitored processes: 6
[2026-03-08 19:27:53] 2026-03-08 23:26:47,665 | INFO     | aborting job monitoring since job object (job id=7032959037) has expired
[2026-03-08 19:27:53] 2026-03-08 23:26:47,963 | INFO     | 
[2026-03-08 19:27:53] 2026-03-08 23:26:47,963 | INFO     | job summary report
[2026-03-08 19:27:53] 2026-03-08 23:26:47,963 | INFO     | --------------------------------------------------
[2026-03-08 19:27:53] 2026-03-08 23:26:47,963 | INFO     | PanDA job id: 7032959037
[2026-03-08 19:27:53] 2026-03-08 23:26:47,963 | INFO     | task id: 48842575
[2026-03-08 19:27:53] 2026-03-08 23:26:47,963 | INFO     | errors: (none)
[2026-03-08 19:27:53] 2026-03-08 23:26:47,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 19:27:53] 2026-03-08 23:26:47,963 | INFO     | pilot state: finished 
[2026-03-08 19:27:53] 2026-03-08 23:26:47,963 | INFO     | transexitcode: 0
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | exeerrorcode: 0
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | exeerrordiag: 
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | exitcode: 0
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | exitmsg: OK
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | cpuconsumptiontime: 71319 s
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | nevents: 400
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | neventsw: 0
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | pid: 1068258
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | pgrp: 1068258
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | corecount: 9
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | event service: False
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | sizes: {0: 2295873, 11: 2295873, 21256: 2330297, 21257: 2330296, 21265: 2334694, 21268: 2334832}
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | --------------------------------------------------
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | 
[2026-03-08 19:27:53] 2026-03-08 23:26:47,964 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-08 19:27:53] 2026-03-08 23:26:48,056 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,057 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,075 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,075 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,087 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 19:27:53] 2026-03-08 23:26:48,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,087 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 19:27:53] 2026-03-08 23:26:48,087 | INFO     | job 7032959037 has completed (purged errors)
[2026-03-08 19:27:53] 2026-03-08 23:26:48,087 | INFO     | overall cleanup function is called
[2026-03-08 19:27:53] 2026-03-08 23:26:48,688 | INFO     | PID=1062868 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-08 19:27:53] 2026-03-08 23:26:48,688 | INFO     | .. there are 42 such processes running
[2026-03-08 19:27:53] 2026-03-08 23:26:49,158 | INFO     | --- collectZombieJob: --- 10, [1068258]
[2026-03-08 19:27:53] 2026-03-08 23:26:49,158 | INFO     | zombie collector waiting for pid 1068258
[2026-03-08 19:27:53] 2026-03-08 23:26:49,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 19:27:53] 2026-03-08 23:26:49,158 | INFO     | collected zombie processes
[2026-03-08 19:27:53] 2026-03-08 23:26:49,158 | INFO     | will attempt to kill all subprocesses of pid=1068258
[2026-03-08 19:27:53] 2026-03-08 23:26:50,788 | INFO     | process IDs to be killed: [1068258] (in reverse order)
[2026-03-08 19:27:53] 2026-03-08 23:26:51,138 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 19:27:53] 2026-03-08 23:26:51,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 19:27:53] 2026-03-08 23:26:51,159 | INFO     | did not find any defunct processes belonging to 1068258
[2026-03-08 19:27:53] 2026-03-08 23:26:51,399 | INFO     | did not find any defunct processes belonging to 1068258
[2026-03-08 19:27:53] 2026-03-08 23:26:51,400 | INFO     | ready for new job
[2026-03-08 19:27:53] 2026-03-08 23:26:51,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 19:27:53] 2026-03-08 23:26:51,402 | INFO     | **************************************
[2026-03-08 19:27:53] 2026-03-08 23:26:51,402 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 19:27:53] 2026-03-08 23:26:51,402 | INFO     | **************************************
[2026-03-08 19:27:53] 2026-03-08 23:26:51,402 | INFO     | 
[2026-03-08 19:27:53] 2026-03-08 23:26:51,425 | INFO     | architecture information:
[2026-03-08 19:27:53] 2026-03-08 23:26:51,426 | INFO     | executing command: cat /etc/os-release
[2026-03-08 19:27:53] 2026-03-08 23:26:51,489 | INFO     | cat /etc/os-release:
[2026-03-08 19:27:53] NAME="CentOS Linux"
[2026-03-08 19:27:53] VERSION="7 (Core)"
[2026-03-08 19:27:53] ID="centos"
[2026-03-08 19:27:53] ID_LIKE="rhel fedora"
[2026-03-08 19:27:53] VERSION_ID="7"
[2026-03-08 19:27:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 19:27:53] ANSI_COLOR="0;31"
[2026-03-08 19:27:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 19:27:53] HOME_URL="https://www.centos.org/"
[2026-03-08 19:27:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 19:27:53] 
[2026-03-08 19:27:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 19:27:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 19:27:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 19:27:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 19:27:53] 
[2026-03-08 19:27:53] 2026-03-08 23:26:51,490 | INFO     | **************************************
[2026-03-08 19:27:53] 2026-03-08 23:26:51,995 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-08 19:27:53] 2026-03-08 23:26:52,040 | INFO     | sufficient remaining disk space (125880500224 B)
[2026-03-08 19:27:53] 2026-03-08 23:26:52,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 19:27:53] 2026-03-08 23:26:52,040 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 19:27:53] 2026-03-08 23:26:52,040 | INFO     | update_server=False
[2026-03-08 19:27:53] 2026-03-08 23:26:52,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 19:27:53] 2026-03-08 23:26:52,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 19:27:53] 2026-03-08 23:26:52,047 | INFO     | aborting loop
[2026-03-08 19:27:53] 2026-03-08 23:26:52,238 | INFO     | all data control threads have been joined
[2026-03-08 19:27:53] 2026-03-08 23:26:52,378 | INFO     | all payload control threads have been joined
[2026-03-08 19:27:53] 2026-03-08 23:26:52,433 | INFO     | all job control threads have been joined
[2026-03-08 19:27:53] 2026-03-08 23:26:52,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 19:27:53] 2026-03-08 23:26:52,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 19:27:53] 2026-03-08 23:26:53,046 | INFO     | [job] retrieve thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,061 | INFO     | [job] job monitor thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,164 | INFO     | [data] copytool_in thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,244 | INFO     | [data] control thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,384 | INFO     | [payload] control thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,390 | INFO     | [payload] failed_post thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,440 | INFO     | [job] control thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,529 | INFO     | [payload] validate_post thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,791 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,791 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:53,955 | INFO     | [job] queue monitor thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:54,107 | INFO     | [job] validate thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:54,125 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:54,503 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:54,803 | INFO     | [data] copytool_out thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:26:55,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 19:27:53] 2026-03-08 23:26:59,496 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 19:27:53] 2026-03-08 23:27:23,173 | INFO     | PID=1062868 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 19:27:53] 2026-03-08 23:27:23,173 | INFO     | .. there are 42 such processes running
[2026-03-08 19:27:53] 2026-03-08 23:27:23,198 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 19:27:53] 2026-03-08 23:27:23,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 19:27:53] 2026-03-08 23:27:23,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 19:27:53] 2026-03-08 23:27:45,024 | INFO     | [monitor] cgroup control has ended
[2026-03-08 19:27:53] 2026-03-08 23:27:45,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348809041728)>', '<ExcThread(monitor, started 140348189832960)>']
[2026-03-08 19:27:53] 2026-03-08 23:27:46,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 19:27:53] 2026-03-08 23:27:46,395 | INFO     | [monitor] control thread has ended
[2026-03-08 19:27:53] 2026-03-08 23:27:50,793 | INFO     | all workflow threads have been joined
[2026-03-08 19:27:53] 2026-03-08 23:27:50,793 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 19:27:53] 2026-03-08 23:27:50,793 | INFO     | traces error code: 0
[2026-03-08 19:27:53] 2026-03-08 23:27:50,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 19:27:53] 2026-03-08 23:27:52,381 [wrapper] ==== pilot stdout END ====
[2026-03-08 19:27:53] 2026-03-08 23:27:52,384 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 19:27:53] 2026-03-08 23:27:52,388 [wrapper] pilotpid: 1062868
[2026-03-08 19:27:53] 2026-03-08 23:27:52,391 [wrapper] Pilot exit status: 0
[2026-03-08 19:27:53] 2026-03-08 23:27:52,438 [wrapper] pandaids: 7032959037
[2026-03-08 19:27:53] 2026-03-08 23:27:52,697 [wrapper] cleanup supervisor_pilot 2534188 1062869
[2026-03-08 19:27:53] 2026-03-08 23:27:52,704 [wrapper] Test setup, not cleaning
[2026-03-08 19:27:53] 2026-03-08 23:27:52,717 [wrapper] apfmon messages muted
[2026-03-08 19:27:53] 2026-03-08 23:27:52,731 [wrapper] ==== wrapper stdout END ====
[2026-03-08 19:27:53] 2026-03-08 23:27:52,742 [wrapper] ==== wrapper stderr END ====
[2026-03-08 19:27:53]  *** Error codes and diagnostics ***
[2026-03-08 19:27:53]     "exeErrorCode": 0,
[2026-03-08 19:27:53]     "exeErrorDiag": "",
[2026-03-08 19:27:53]     "pilotErrorCode": 0,
[2026-03-08 19:27:53]     "pilotErrorDiag": "",
[2026-03-08 19:27:53]  *** Listing of results directory ***
[2026-03-08 19:27:53] total 598456
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 05:26 pilot3.tar.gz
[2026-03-08 19:27:53] -rwx------. 1 boincer umatlas     36322 Feb 28 05:29 runpilot2-wrapper.sh
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 05:31 queuedata.json
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas       100 Mar  8 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 19:27:53] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 13:31 run_atlas
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas       105 Mar  8 13:31 job.xml
[2026-03-08 19:27:53] -rw-r--r--. 2 boincer umatlas 301657634 Mar  8 13:31 EVNT.48448667._000001.pool.root.1
[2026-03-08 19:27:53] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 13:31 start_atlas.sh
[2026-03-08 19:27:53] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 13:31 shared
[2026-03-08 19:27:53] -rw-r--r--. 2 boincer umatlas    597967 Mar  8 13:31 input.tar.gz
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas         0 Mar  8 13:31 boinc_lockfile
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas      2612 Mar  8 13:31 pandaJob.out
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas        57 Mar  8 13:31 setup.sh.local
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas    999212 Mar  8 13:31 agis_schedconf.cvmfs.json
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas       428 Mar  8 13:32 workernode_map.json
[2026-03-08 19:27:53] drwx------. 5 boincer umatlas      4096 Mar  8 13:32 pilot3
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas      6946 Mar  8 19:21 init_data.xml
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas 300485564 Mar  8 19:25 HITS.48842575._000022.pool.root.1
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas       530 Mar  8 19:25 boinc_task_state.xml
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas      1045 Mar  8 19:26 memory_monitor_summary.json
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas        95 Mar  8 19:26 pilot_heartbeat.json
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas   1511578 Mar  8 19:26 agis_ddmendpoints.agis.ALL.json
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas    578007 Mar  8 19:26 log.48842575._000022.job.log.tgz.1
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas      6340 Mar  8 19:26 heartbeat.json
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas      4821 Mar  8 19:27 pilotlog.txt
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 19:27 boinc_mmap_file
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas   2791189 Mar  8 19:27 log.48842575._000022.job.log.1
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas        28 Mar  8 19:27 wrapper_checkpoint.txt
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas       357 Mar  8 19:27 output.list
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas       620 Mar  8 19:27 runtime_log
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas   3389440 Mar  8 19:27 result.tar.gz
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas      9337 Mar  8 19:27 runtime_log.err
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas       661 Mar  8 19:27 fMNNDmIlWG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmox6KDmwH3aon.diag
[2026-03-08 19:27:53] -rw-r--r--. 1 boincer umatlas     21204 Mar  8 19:27 stderr.txt
[2026-03-08 19:27:53] HITS file was successfully produced:
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas 300485564 Mar  8 19:25 shared/HITS.pool.root.1
[2026-03-08 19:27:53]  *** Contents of shared directory: ***
[2026-03-08 19:27:53] total 591952
[2026-03-08 19:27:53] -rw-r--r--. 2 boincer umatlas 301657634 Mar  8 13:31 ATLAS.root_0
[2026-03-08 19:27:53] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 13:31 start_atlas.sh
[2026-03-08 19:27:53] -rw-r--r--. 2 boincer umatlas    597967 Mar  8 13:31 input.tar.gz
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas 300485564 Mar  8 19:25 HITS.pool.root.1
[2026-03-08 19:27:53] -rw-------. 1 boincer umatlas   3389440 Mar  8 19:27 result.tar.gz
19:28:15 (1058920): run_atlas exited; CPU time 72299.591475
19:28:15 (1058920): called boinc_finish(0)

</stderr_txt>
]]>

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