Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:29:19 (2575065): wrapper (7.7.26015): starting
14:29:19 (2575065): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 14:29:19] Arguments: --nthreads 4
[2026-03-09 14:29:19] Threads: 4
[2026-03-09 14:29:19] Checking for CVMFS
[2026-03-09 14:29:19] No cvmfs_config command found, will try listing directly
[2026-03-09 14:29:19] CVMFS is ok
[2026-03-09 14:29:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 14:29:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 14:29:19] Further information can be found at the LHC@home message board.
[2026-03-09 14:29:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 14:29:19] Checking for apptainer binary...
[2026-03-09 14:29:19] which: no apptainer in ((null))
[2026-03-09 14:29:19] apptainer is not installed, using version from CVMFS
[2026-03-09 14:29:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 14:29:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot172/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-09 14:29:19] apptainer works
[2026-03-09 14:29:19] Set ATHENA_PROC_NUMBER=4
[2026-03-09 14:29:19] Set ATHENA_CORE_NUMBER=4
[2026-03-09 14:29:19] Starting ATLAS job with PandaID=7045948966
[2026-03-09 14:29:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot172/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 15:58:46]  *** The last 200 lines of the pilot log: ***
[2026-03-09 15:58:46]  is_tar=False
[2026-03-09 15:58:46]  lfn=log.48958635._001711.job.log.tgz.1
[2026-03-09 15:58:46]  mtime=0
[2026-03-09 15:58:46]  protocol_id=None
[2026-03-09 15:58:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 15:58:46]  replicas=None
[2026-03-09 15:58:46]  scope=mc23_13p6TeV
[2026-03-09 15:58:46]  status=None
[2026-03-09 15:58:46]  status_code=0
[2026-03-09 15:58:46]  storage_token=
[2026-03-09 15:58:46]  surl=/var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045948966/log.48958635._001711.job.log.tgz.1
[2026-03-09 15:58:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/15/log.48958635._001711.job.log.tgz.1
[2026-03-09 15:58:46]  workdir=None
[2026-03-09 15:58:46] ]
[2026-03-09 15:58:46] 2026-03-09 14:57:47,274 | INFO     | transferring file log.48958635._001711.job.log.tgz.1 from /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045948966/log.48958635._001711.job.log.tgz.1 to /var/lib/
[2026-03-09 15:58:46] 2026-03-09 14:57:47,275 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045948966/log.48958635._001711.job.log.tgz.1 /var/lib/boinc/var/slot172/slots/0/
[2026-03-09 15:58:46] 2026-03-09 14:57:47,305 | INFO     | adding to output.list: log.48958635._001711.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/15/log.48958635._001711.job.log.tg
[2026-03-09 15:58:46] 2026-03-09 14:57:47,306 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 15:58:46] 2026-03-09 14:57:47,306 | INFO     | summary of transferred files:
[2026-03-09 15:58:46] 2026-03-09 14:57:47,306 | INFO     |  -- lfn=log.48958635._001711.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 15:58:46] 2026-03-09 14:57:47,306 | INFO     | stage-out finished correctly
[2026-03-09 15:58:46] 2026-03-09 14:57:47,530 | INFO     | PID=2579753 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 15:58:46] 2026-03-09 14:57:47,530 | INFO     | .. there are 58 such processes running
[2026-03-09 15:58:46] 2026-03-09 14:57:48,530 | INFO     | time since job start (5297s) is within the limit (349056.0s)
[2026-03-09 15:58:46] 2026-03-09 14:57:48,556 | WARNING  | process 2586749 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 15:58:46] 2026-03-09 14:57:48,556 | INFO     | using path: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045948966/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 15:58:46] 2026-03-09 14:57:48,984 | INFO     | number of running child processes to parent process 2586749: 1
[2026-03-09 15:58:46] 2026-03-09 14:57:48,984 | INFO     | maximum number of monitored processes: 6
[2026-03-09 15:58:46] 2026-03-09 14:57:50,536 | INFO     | time since job start (5299s) is within the limit (349056.0s)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,556 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 15:58:46] 2026-03-09 14:57:50,604 | INFO     | job 7045948966 has state=finished
[2026-03-09 15:58:46] 2026-03-09 14:57:50,604 | INFO     | preparing for final server update for job 7045948966 in state='finished'
[2026-03-09 15:58:46] 2026-03-09 14:57:50,604 | INFO     | reading metadata from: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045948966/jobReport.json
[2026-03-09 15:58:46] 2026-03-09 14:57:50,605 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot172/slots/0/workernode_map.json
[2026-03-09 15:58:46] 2026-03-09 14:57:50,606 | INFO     | this job has now completed (state=finished)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,606 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,606 | INFO     | log transfer has been attempted: DONE
[2026-03-09 15:58:46] 2026-03-09 14:57:50,606 | INFO     | job 7045948966 has finished - writing final server update
[2026-03-09 15:58:46] 2026-03-09 14:57:50,606 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_59840/.job.ad'
[2026-03-09 15:58:46] 2026-03-09 14:57:50,606 | INFO     | total number of processed events: 400 (read)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,623 | INFO     | using path: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045948966/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,624 | INFO     | extracted standard info from prmon json
[2026-03-09 15:58:46] 2026-03-09 14:57:50,624 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 15:58:46] 2026-03-09 14:57:50,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 15:58:46] 2026-03-09 14:57:50,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 15:58:46] 2026-03-09 14:57:50,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 15:58:46] 2026-03-09 14:57:50,625 | INFO     | fitting pss+swap vs Time
[2026-03-09 15:58:46] 2026-03-09 14:57:50,625 | INFO     | sum of square deviations: 158737860.0
[2026-03-09 15:58:46] 2026-03-09 14:57:50,625 | INFO     | sum of deviations: -63205760.00000001
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | mean x: 1773065706.5
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | mean y: 2343522.35
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | intersect: 708337451.6449361
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | chi2: 0.0004687410415237947
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | current memory leak: -0.40 B/s (using 80 data points, chi2=0.00)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | could have reported an average CPU frequency of 3592 MHz (6 samples)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | ..............................
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | . Timing measurements:
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | . get job = 0 s
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | . initial setup = 5 s
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | . payload setup = 4 s
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | . stage-in = 0 s
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | . payload execution = 5275 s
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | . stage-out = 0 s
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | . log creation = 0 s
[2026-03-09 15:58:46] 2026-03-09 14:57:50,626 | INFO     | ..............................
[2026-03-09 15:58:46] 2026-03-09 14:57:50,674 | INFO     | 
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | job summary report
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | --------------------------------------------------
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | PanDA job id: 7045948966
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | task id: 48958635
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | errors: (none)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | pilot state: finished 
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | transexitcode: 0
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | exeerrorcode: 0
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | exeerrordiag: 
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | exitcode: 0
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | exitmsg: OK
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | cpuconsumptiontime: 20069 s
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | nevents: 400
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | neventsw: 0
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | pid: 2586749
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | pgrp: 2586749
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | corecount: 4
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | event service: False
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | sizes: {0: 2279765, 1: 2280226, 11: 2280226, 5284: 2306813, 5285: 2315835, 5288: 2316213}
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | --------------------------------------------------
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | 
[2026-03-09 15:58:46] 2026-03-09 14:57:50,675 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot172/slots/0
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 15:58:46] 2026-03-09 14:57:50,698 | INFO     | job 7045948966 has completed (purged errors)
[2026-03-09 15:58:46] 2026-03-09 14:57:50,699 | INFO     | overall cleanup function is called
[2026-03-09 15:58:46] 2026-03-09 14:57:51,705 | INFO     | --- collectZombieJob: --- 10, [2586749]
[2026-03-09 15:58:46] 2026-03-09 14:57:51,706 | INFO     | zombie collector waiting for pid 2586749
[2026-03-09 15:58:46] 2026-03-09 14:57:51,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 15:58:46] 2026-03-09 14:57:51,706 | INFO     | collected zombie processes
[2026-03-09 15:58:46] 2026-03-09 14:57:51,706 | INFO     | will attempt to kill all subprocesses of pid=2586749
[2026-03-09 15:58:46] 2026-03-09 14:57:52,164 | INFO     | process IDs to be killed: [2586749] (in reverse order)
[2026-03-09 15:58:46] 2026-03-09 14:57:52,381 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 15:58:46] 2026-03-09 14:57:52,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 15:58:46] 2026-03-09 14:57:52,407 | INFO     | did not find any defunct processes belonging to 2586749
[2026-03-09 15:58:46] 2026-03-09 14:57:52,430 | INFO     | did not find any defunct processes belonging to 2586749
[2026-03-09 15:58:46] 2026-03-09 14:57:52,431 | INFO     | ready for new job
[2026-03-09 15:58:46] 2026-03-09 14:57:52,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 15:58:46] 2026-03-09 14:57:52,432 | INFO     | **************************************
[2026-03-09 15:58:46] 2026-03-09 14:57:52,432 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 15:58:46] 2026-03-09 14:57:52,432 | INFO     | **************************************
[2026-03-09 15:58:46] 2026-03-09 14:57:52,432 | INFO     | 
[2026-03-09 15:58:46] 2026-03-09 14:57:52,437 | INFO     | architecture information:
[2026-03-09 15:58:46] 2026-03-09 14:57:52,438 | INFO     | executing command: cat /etc/os-release
[2026-03-09 15:58:46] 2026-03-09 14:57:52,452 | INFO     | cat /etc/os-release:
[2026-03-09 15:58:46] NAME="CentOS Linux"
[2026-03-09 15:58:46] VERSION="7 (Core)"
[2026-03-09 15:58:46] ID="centos"
[2026-03-09 15:58:46] ID_LIKE="rhel fedora"
[2026-03-09 15:58:46] VERSION_ID="7"
[2026-03-09 15:58:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 15:58:46] ANSI_COLOR="0;31"
[2026-03-09 15:58:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 15:58:46] HOME_URL="https://www.centos.org/"
[2026-03-09 15:58:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 15:58:46] 
[2026-03-09 15:58:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 15:58:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 15:58:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 15:58:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 15:58:46] 
[2026-03-09 15:58:46] 2026-03-09 14:57:52,452 | INFO     | **************************************
[2026-03-09 15:58:46] 2026-03-09 14:57:52,955 | INFO     | executing command: df -mP /var/lib/boinc/var/slot172/slots/0
[2026-03-09 15:58:46] 2026-03-09 14:57:52,969 | INFO     | sufficient remaining disk space (22718447616 B)
[2026-03-09 15:58:46] 2026-03-09 14:57:52,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 15:58:46] 2026-03-09 14:57:52,969 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 15:58:46] 2026-03-09 14:57:52,969 | INFO     | update_server=False
[2026-03-09 15:58:46] 2026-03-09 14:57:52,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 15:58:46] 2026-03-09 14:57:52,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 15:58:46] 2026-03-09 14:57:52,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:58:46] 2026-03-09 14:57:52,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 15:58:46] 2026-03-09 14:57:52,970 | INFO     | aborting loop
[2026-03-09 15:58:46] 2026-03-09 14:57:53,250 | INFO     | all data control threads have been joined
[2026-03-09 15:58:46] 2026-03-09 14:57:53,636 | INFO     | all payload control threads have been joined
[2026-03-09 15:58:46] 2026-03-09 14:57:53,788 | INFO     | all job control threads have been joined
[2026-03-09 15:58:46] 2026-03-09 14:57:53,975 | INFO     | [job] retrieve thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:53,975 | INFO     | [job] job monitor thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:54,255 | INFO     | [data] control thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:54,335 | INFO     | [data] copytool_in thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:54,411 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:54,641 | INFO     | [payload] control thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:54,793 | INFO     | [job] control thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:54,976 | INFO     | [data] copytool_out thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:54,978 | INFO     | [payload] validate_post thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:55,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:55,233 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:55,238 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:55,274 | INFO     | [job] validate thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:55,542 | INFO     | [payload] failed_post thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:55,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:58:46] 2026-03-09 14:57:56,688 | INFO     | [job] queue monitor thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:57:56,975 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 15:58:46] 2026-03-09 14:58:24,061 | INFO     | PID=2579753 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 15:58:46] 2026-03-09 14:58:24,062 | INFO     | .. there are 57 such processes running
[2026-03-09 15:58:46] 2026-03-09 14:58:24,062 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 15:58:46] 2026-03-09 14:58:24,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 15:58:46] 2026-03-09 14:58:24,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 15:58:46] 2026-03-09 14:58:39,985 | INFO     | [monitor] cgroup control has ended
[2026-03-09 15:58:46] 2026-03-09 14:58:40,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22808526464832)>', '<ExcThread(monitor, started 22808216192768)>']
[2026-03-09 15:58:46] 2026-03-09 14:58:41,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 15:58:46] 2026-03-09 14:58:41,147 | INFO     | [monitor] control thread has ended
[2026-03-09 15:58:46] 2026-03-09 14:58:45,979 | INFO     | all workflow threads have been joined
[2026-03-09 15:58:46] 2026-03-09 14:58:45,980 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 15:58:46] 2026-03-09 14:58:45,980 | INFO     | traces error code: 0
[2026-03-09 15:58:46] 2026-03-09 14:58:45,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 15:58:46] 2026-03-09 14:58:46,146 [wrapper] ==== pilot stdout END ====
[2026-03-09 15:58:46] 2026-03-09 14:58:46,149 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 15:58:46] 2026-03-09 14:58:46,151 [wrapper] pilotpid: 2579753
[2026-03-09 15:58:46] 2026-03-09 14:58:46,154 [wrapper] Pilot exit status: 0
[2026-03-09 15:58:46] 2026-03-09 14:58:46,163 [wrapper] pandaids: 7045948966
[2026-03-09 15:58:46] 2026-03-09 14:58:46,281 [wrapper] cleanup supervisor_pilot 3482260 2579754
[2026-03-09 15:58:46] 2026-03-09 14:58:46,284 [wrapper] Test setup, not cleaning
[2026-03-09 15:58:46] 2026-03-09 14:58:46,286 [wrapper] apfmon messages muted
[2026-03-09 15:58:46] 2026-03-09 14:58:46,288 [wrapper] ==== wrapper stdout END ====
[2026-03-09 15:58:46] 2026-03-09 14:58:46,291 [wrapper] ==== wrapper stderr END ====
[2026-03-09 15:58:46]  *** Error codes and diagnostics ***
[2026-03-09 15:58:46]     "exeErrorCode": 0,
[2026-03-09 15:58:46]     "exeErrorDiag": "",
[2026-03-09 15:58:46]     "pilotErrorCode": 0,
[2026-03-09 15:58:46]     "pilotErrorDiag": "",
[2026-03-09 15:58:46]  *** Listing of results directory ***
[2026-03-09 15:58:46] total 441136
[2026-03-09 15:58:46] -rwx------. 1 boinc boinc     36322 Mar  8 10:02 runpilot2-wrapper.sh
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc    584627 Mar  8 10:02 pilot3.tar.gz
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc      5111 Mar  8 10:02 queuedata.json
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc       100 Mar  9 14:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 15:58:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 14:29 run_atlas
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc       105 Mar  9 14:29 job.xml
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc      6707 Mar  9 14:29 init_data.xml
[2026-03-09 15:58:46] -rw-r--r--. 2 boinc boinc 265799676 Mar  9 14:29 EVNT.48958633._000067.pool.root.1
[2026-03-09 15:58:46] -rw-r--r--. 2 boinc boinc     15845 Mar  9 14:29 start_atlas.sh
[2026-03-09 15:58:46] drwxrwx--x. 2 boinc boinc      4096 Mar  9 14:29 shared
[2026-03-09 15:58:46] -rw-r--r--. 2 boinc boinc    597928 Mar  9 14:29 input.tar.gz
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc         0 Mar  9 14:29 boinc_lockfile
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc      2526 Mar  9 14:29 pandaJob.out
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc    990728 Mar  9 14:29 agis_schedconf.cvmfs.json
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc   1511578 Mar  9 14:29 agis_ddmendpoints.agis.ALL.json
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc       444 Mar  9 14:29 workernode_map.json
[2026-03-09 15:58:46] drwx------. 5 boinc boinc      4096 Mar  9 14:29 pilot3
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc 179926776 Mar  9 15:57 HITS.48958635._001711.pool.root.1
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc       529 Mar  9 15:57 boinc_task_state.xml
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc      1032 Mar  9 15:57 memory_monitor_summary.json
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc    276535 Mar  9 15:57 log.48958635._001711.job.log.tgz.1
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc      6350 Mar  9 15:57 heartbeat.json
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc        95 Mar  9 15:58 pilot_heartbeat.json
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc      8192 Mar  9 15:58 boinc_mmap_file
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc        27 Mar  9 15:58 wrapper_checkpoint.txt
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc      4830 Mar  9 15:58 pilotlog.txt
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc    771200 Mar  9 15:58 log.48958635._001711.job.log.1
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc       357 Mar  9 15:58 output.list
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc       620 Mar  9 15:58 runtime_log
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc   1064960 Mar  9 15:58 result.tar.gz
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc      9221 Mar  9 15:58 runtime_log.err
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc       661 Mar  9 15:58 n6yNDm9CPJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnkYLDmKT5hrn.diag
[2026-03-09 15:58:46] -rw-r--r--. 1 boinc boinc      2024 Mar  9 15:58 stderr.txt
[2026-03-09 15:58:46] HITS file was successfully produced:
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc 179926776 Mar  9 15:57 shared/HITS.pool.root.1
[2026-03-09 15:58:46]  *** Contents of shared directory: ***
[2026-03-09 15:58:46] total 436932
[2026-03-09 15:58:46] -rw-r--r--. 2 boinc boinc 265799676 Mar  9 14:29 ATLAS.root_0
[2026-03-09 15:58:46] -rw-r--r--. 2 boinc boinc     15845 Mar  9 14:29 start_atlas.sh
[2026-03-09 15:58:46] -rw-r--r--. 2 boinc boinc    597928 Mar  9 14:29 input.tar.gz
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc 179926776 Mar  9 15:57 HITS.pool.root.1
[2026-03-09 15:58:46] -rw-------. 1 boinc boinc   1064960 Mar  9 15:58 result.tar.gz
15:58:47 (2575065): run_atlas exited; CPU time 20283.036056
15:58:47 (2575065): called boinc_finish(0)

</stderr_txt>
]]>

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