Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-09 18:39:36 (27500): vboxwrapper version 26210
2026-03-09 18:39:36 (27500): BOINC client version: 8.2.8
2026-03-09 18:39:36 (27500): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-03-09 18:39:37 (27500): Successfully copied 'init_data.xml' to the shared directory.
2026-03-09 18:39:37 (27500): Create VM. (boinc_a6bff6d830318626, slot#2)
2026-03-09 18:39:37 (27500): Setting Memory Size for VM. (4800MB)
2026-03-09 18:39:38 (27500): Setting CPU Count for VM. (8)
2026-03-09 18:39:38 (27500): Setting Chipset Options for VM.
2026-03-09 18:39:38 (27500): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-09 18:39:38 (27500): Setting Boot Options for VM.
2026-03-09 18:39:39 (27500): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-09 18:39:39 (27500): Enabling VM Network Access.
2026-03-09 18:39:39 (27500): Disabling USB Support for VM.
2026-03-09 18:39:40 (27500): Disabling COM Port Support for VM.
2026-03-09 18:39:40 (27500): Disabling LPT Port Support for VM.
2026-03-09 18:39:40 (27500): Disabling Audio Support for VM.
2026-03-09 18:39:40 (27500): Disabling Clipboard Support for VM.
2026-03-09 18:39:41 (27500): Disabling Drag and Drop Support for VM.
2026-03-09 18:39:41 (27500): Adding storage controller(s) to VM.
2026-03-09 18:39:41 (27500): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-09 18:39:42 (27500): Adding VirtualBox Guest Additions to VM.
2026-03-09 18:39:42 (27500): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-09 18:39:42 (27500): forwarding host port 62389 to guest port 80
2026-03-09 18:39:43 (27500): Enabling remote desktop for VM.
2026-03-09 18:39:43 (27500): Enabling shared directory for VM.
2026-03-09 18:39:44 (27500): Starting VM using VBoxManage interface. (boinc_a6bff6d830318626, slot#2)
2026-03-09 18:39:48 (27500): Successfully started VM. (PID = '25108')
2026-03-09 18:39:48 (27500): Reporting VM Process ID to BOINC.
2026-03-09 18:39:48 (27500): Guest Log: BIOS: VirtualBox 7.2.4
2026-03-09 18:39:48 (27500): Guest Log: CPUID EDX: 0x178bfbff
2026-03-09 18:39:48 (27500): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-09 18:39:48 (27500): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-09 18:39:48 (27500): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-09 18:39:48 (27500): Detected: Web Application Enabled (http://localhost:62389)
2026-03-09 18:39:48 (27500): Detected: Remote Desktop Enabled (localhost:55269)
2026-03-09 18:39:48 (27500): Preference change detected
2026-03-09 18:39:48 (27500): Setting CPU throttle for VM. (90%)
2026-03-09 18:39:49 (27500): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-09 18:39:51 (27500): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-09 18:39:51 (27500): Guest Log: BIOS: Booting from Hard Disk...
2026-03-09 18:39:54 (27500): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-09 18:39:54 (27500): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-09 18:39:54 (27500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-09 18:40:00 (27500): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-09 18:40:00 (27500): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-09 18:40:05 (27500): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-09 18:40:05 (27500): Guest Log: 00:00:00.000281 main     Log opened 2026-03-09T18:40:02.990114000Z
2026-03-09 18:40:05 (27500): Guest Log: 00:00:00.000575 main     OS Product: Linux
2026-03-09 18:40:05 (27500): Guest Log: 00:00:00.000610 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-09 18:40:05 (27500): Guest Log: 00:00:00.000635 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-09 18:40:05 (27500): Guest Log: 00:00:00.000660 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-09 18:40:05 (27500): Guest Log: 00:00:00.000661 main     Process ID: 1390
2026-03-09 18:40:05 (27500): Guest Log: 00:00:00.000661 main     Package type: LINUX_64BITS_GENERIC
2026-03-09 18:40:05 (27500): Guest Log: 00:00:00.004537 main     5.2.32 r132073 started. Verbose level = 0
2026-03-09 18:40:05 (27500): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-09 18:40:05 (27500): Guest Log: [INFO] Mounting shared directory
2026-03-09 18:40:05 (27500): Guest Log: [INFO] Checking for init_data.xml
2026-03-09 18:40:09 (27500): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-09 18:40:09 (27500): Guest Log: [INFO] Detected branch: prod
2026-03-09 18:40:09 (27500): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-09 18:40:09 (27500): Guest Log: Copying input files
2026-03-09 18:40:11 (27500): Guest Log: Copied input files into RunAtlas.
2026-03-09 18:40:11 (27500): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2026-03-09 18:40:15 (27500): Guest Log: 00:00:10.007508 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 250 643 000ns (GuestNow=1 773 074 414 745 342 000 ns GuestLast=1 773 081 602 995 985 000 ns fSetTimeLastLoop=true )
2026-03-09 18:41:02 (27500): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-09 18:41:02 (27500): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-09 18:41:02 (27500): Guest Log: 2.6.3.0 1667 0 29620 157083 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2026-03-09 18:41:03 (27500): Guest Log: copied the webapp to /var/www
2026-03-09 18:41:04 (27500): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-09 18:41:04 (27500): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-09 18:41:04 (27500): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-09 18:41:04 (27500): Guest Log:  *** Starting ATLAS job. (PandaID=7046324449 taskID=48966988) ***
2026-03-09 20:00:45 (27500): Guest Log:  *** Job finished ***
2026-03-09 20:00:45 (27500): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 17:59:40,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 17:59:44,965 | INFO     | [data] queue_monitor thread has finished
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:36,829 | INFO     | [monitor] cgroup control has ended
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:37,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958197667648)>', '<ExcThread(monitor, started 139957507172096)>']
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:38,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:38,167 | INFO     | [monitor] control thread has ended
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:42,709 | INFO     | all workflow threads have been joined
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:42,710 | INFO     | end of generic workflow (traces error code: 0)
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:42,710 | INFO     | traces error code: 0
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:42,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:42,882 [wrapper] ==== pilot stdout END ====
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:42,888 [wrapper] ==== wrapper stdout RESUME ====
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:42,896 [wrapper] pilotpid: 6096
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:42,916 [wrapper] Pilot exit status: 0
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:42,972 [wrapper] pandaids: 7046324449
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:43,020 [wrapper] cleanup supervisor_pilot 25339 6097
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:43,034 [wrapper] Test setup, not cleaning
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:43,046 [wrapper] apfmon messages muted
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:43,053 [wrapper] ==== wrapper stdout END ====
2026-03-09 20:00:45 (27500): Guest Log: 2026-03-09 18:00:43,059 [wrapper] ==== wrapper stderr END ====
2026-03-09 20:00:45 (27500): Guest Log:  *** Error codes and diagnostics ***
2026-03-09 20:00:45 (27500): Guest Log:     "exeErrorCode": 0,
2026-03-09 20:00:45 (27500): Guest Log:     "exeErrorDiag": "",
2026-03-09 20:00:45 (27500): Guest Log:     "pilotErrorCode": 0,
2026-03-09 20:00:45 (27500): Guest Log:     "pilotErrorDiag": "",
2026-03-09 20:00:45 (27500): Guest Log:  *** Listing of results directory ***
2026-03-09 20:00:45 (27500): Guest Log: total 195948
2026-03-09 20:00:45 (27500): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  8 13:48 pilot3.tar.gz
2026-03-09 20:00:45 (27500): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  8 13:52 runpilot2-wrapper.sh
2026-03-09 20:00:45 (27500): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  8 13:52 queuedata.json
2026-03-09 20:00:45 (27500): Guest Log: -rwxr-xr-x. 1 atlas atlas      9296 Mar  9 16:40 init_data.xml
2026-03-09 20:00:45 (27500): Guest Log: -rwxr-xr-x. 1 atlas atlas    597968 Mar  9 16:40 input.tar.gz
2026-03-09 20:00:45 (27500): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  9 16:40 start_atlas.sh
2026-03-09 20:00:45 (27500): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  9 16:40 EVNT.48966985._000630.pool.root.1 -> /data/./ATLAS.root_0
2026-03-09 20:00:45 (27500): Guest Log: -rw-r--r--. 1 atlas atlas      2592 Mar  9 16:41 pandaJob.out
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas        69 Mar  9 16:41 setup.sh.local
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas   1002608 Mar  9 16:41 agis_schedconf.cvmfs.json
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar  9 16:41 agis_ddmendpoints.agis.ALL.json
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas       435 Mar  9 16:41 workernode_map.json
2026-03-09 20:00:45 (27500): Guest Log: drwx------. 5 atlas atlas      4096 Mar  9 16:41 pilot3
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas 194748536 Mar  9 17:59 HITS.48966988._016179.pool.root.1
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas        95 Mar  9 17:59 pilot_heartbeat.json
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas      1029 Mar  9 17:59 memory_monitor_summary.json
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas    336080 Mar  9 17:59 log.48966988._016179.job.log.tgz.1
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas      6374 Mar  9 17:59 heartbeat.json
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas      4608 Mar  9 18:00 pilotlog.txt
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas    679077 Mar  9 18:00 log.48966988._016179.job.log.1
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas       357 Mar  9 18:00 output.list
2026-03-09 20:00:45 (27500): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  9 18:00 runtime_log
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas   1034240 Mar  9 18:00 result.tar.gz
2026-03-09 20:00:45 (27500): Guest Log: -rw-r--r--. 1 atlas atlas      9320 Mar  9 18:00 runtime_log.err
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas       650 Mar  9 18:00 GCQMDmFjTJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhuWLDmxqMkDm.diag
2026-03-09 20:00:45 (27500): Guest Log: Looking for outputfile HITS.48966988._016179.pool.root.1
2026-03-09 20:00:45 (27500): Guest Log: HITS file was successfully produced
2026-03-09 20:00:45 (27500): Guest Log: -rw-------. 1 atlas atlas 194748536 Mar  9 17:59 /home/atlas/RunAtlas/HITS.48966988._016179.pool.root.1
2026-03-09 20:00:45 (27500): Guest Log: Successfully finished the ATLAS job!
2026-03-09 20:00:45 (27500): Guest Log: Copying the results back to the shared directory!
2026-03-09 20:00:46 (27500): Guest Log:  *** Contents of shared directory: ***
2026-03-09 20:00:46 (27500): Guest Log: total 398364
2026-03-09 20:00:46 (27500): Guest Log: -rwxrwxrwx. 1 root root 211507819 Mar  9 16:39 ATLAS.root_0
2026-03-09 20:00:46 (27500): Guest Log: -rwxrwxrwx. 1 root root 194748536 Mar  9 18:00 HITS.pool.root.1
2026-03-09 20:00:46 (27500): Guest Log: -rwxrwxrwx. 1 root root      9296 Mar  9 16:39 init_data.xml
2026-03-09 20:00:46 (27500): Guest Log: -rwxrwxrwx. 1 root root    597968 Mar  8 18:11 input.tar.gz
2026-03-09 20:00:46 (27500): Guest Log: -rwxrwxrwx. 1 root root   1034240 Mar  9 18:00 result.tar.gz
2026-03-09 20:00:46 (27500): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  8 18:11 start_atlas.sh
2026-03-09 20:00:46 (27500): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-09 20:00:46 (27500): VM Completion File Detected.
2026-03-09 20:00:46 (27500): Powering off VM.
2026-03-09 20:00:46 (27500): Successfully stopped VM.
2026-03-09 20:00:46 (27500): Deregistering VM. (boinc_a6bff6d830318626, slot#2)
2026-03-09 20:00:46 (27500): Removing network bandwidth throttle group from VM.
2026-03-09 20:00:47 (27500): Removing VM from VirtualBox.
2026-03-09 20:00:52 (27500): called boinc_finish(0)

</stderr_txt>
]]>

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