Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:09:27 (26595): wrapper (7.7.26015): starting
03:09:27 (26595): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 03:09:27] Arguments: --nthreads 8
[2026-03-09 03:09:27] Threads: 8
[2026-03-09 03:09:27] Checking for CVMFS
[2026-03-09 03:09:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 03:09:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 03:09:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 03:09:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 03:09:30] 2.11.2.0 29086 119755 138624 157060 1 94 18110865 25165824 1081 130560 160 36642892 99.789 31470719 1069 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-09 03:09:30] CVMFS is ok
[2026-03-09 03:09:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 03:09:30] Checking for apptainer binary...
[2026-03-09 03:09:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 03:09:30] Running /usr/bin/apptainer --version
[2026-03-09 03:09:30] apptainer version 1.3.2-1.el7
[2026-03-09 03:09:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 03:10:01] cg-vwn413.simple-grid.lan
[2026-03-09 03:10:01] apptainer works
[2026-03-09 03:10:01] Set ATHENA_PROC_NUMBER=8
[2026-03-09 03:10:01] Set ATHENA_CORE_NUMBER=8
[2026-03-09 03:10:01] Starting ATLAS job with PandaID=7039905602
[2026-03-09 03:10:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 07:28:34]  *** The last 200 lines of the pilot log: ***
[2026-03-09 07:28:34] 2026-03-09 06:27:41,137 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7039905602/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,138 | INFO     | extracted standard info from prmon json
[2026-03-09 07:28:34] 2026-03-09 06:27:41,138 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 07:28:34] 2026-03-09 06:27:41,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 07:28:34] 2026-03-09 06:27:41,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 07:28:34] 2026-03-09 06:27:41,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 07:28:34] 2026-03-09 06:27:41,144 | INFO     | fitting pss+swap vs Time
[2026-03-09 07:28:34] 2026-03-09 06:27:41,144 | INFO     | sum of square deviations: 4449281562.0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,146 | INFO     | sum of deviations: 98643118544.0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,146 | INFO     | mean x: 1773030226.0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,146 | INFO     | mean y: 2431510.70781893
[2026-03-09 07:28:34] 2026-03-09 06:27:41,147 | INFO     | intersect: -39306663301.17344
[2026-03-09 07:28:34] 2026-03-09 06:27:41,147 | INFO     | chi2: 9.257906199397425
[2026-03-09 07:28:34] 2026-03-09 06:27:41,147 | INFO     | sum of square deviations: 4180243959.5
[2026-03-09 07:28:34] 2026-03-09 06:27:41,150 | INFO     | sum of deviations: 112639454016.5
[2026-03-09 07:28:34] 2026-03-09 06:27:41,150 | INFO     | mean x: 1773030073.5
[2026-03-09 07:28:34] 2026-03-09 06:27:41,150 | INFO     | mean y: 2439292.5
[2026-03-09 07:28:34] 2026-03-09 06:27:41,150 | INFO     | intersect: -47773035385.241684
[2026-03-09 07:28:34] 2026-03-09 06:27:41,150 | INFO     | chi2: 8.579541135410285
[2026-03-09 07:28:34] 2026-03-09 06:27:41,150 | INFO     | current chi2=8.579541135410285 (change=7.327413449396296 %)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,151 | INFO     | right removable region: 237
[2026-03-09 07:28:34] 2026-03-09 06:27:41,151 | INFO     | sum of square deviations: 4180243959.5
[2026-03-09 07:28:34] 2026-03-09 06:27:41,156 | INFO     | sum of deviations: 13513496926.500023
[2026-03-09 07:28:34] 2026-03-09 06:27:41,156 | INFO     | mean x: 1773030378.5
[2026-03-09 07:28:34] 2026-03-09 06:27:41,156 | INFO     | mean y: 2479738.0462184874
[2026-03-09 07:28:34] 2026-03-09 06:27:41,156 | INFO     | intersect: -5729205015.902152
[2026-03-09 07:28:34] 2026-03-09 06:27:41,157 | INFO     | chi2: 4.030387553022382
[2026-03-09 07:28:34] 2026-03-09 06:27:41,157 | INFO     | current chi2=4.030387553022382 (change=56.4654527037149 %)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,157 | INFO     | sum of square deviations: 3922276332.0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,159 | INFO     | sum of deviations: -51658875287.999985
[2026-03-09 07:28:34] 2026-03-09 06:27:41,160 | INFO     | mean x: 1773030531.0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,160 | INFO     | mean y: 2518211.4892703863
[2026-03-09 07:28:34] 2026-03-09 06:27:41,160 | INFO     | intersect: 23354458597.607224
[2026-03-09 07:28:34] 2026-03-09 06:27:41,160 | INFO     | chi2: 1.1652322259546897
[2026-03-09 07:28:34] 2026-03-09 06:27:41,160 | INFO     | current chi2=1.1652322259546897 (change=71.08882928439763 %)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,161 | INFO     | sum of square deviations: 3675146117.0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,163 | INFO     | sum of deviations: -61800331193.5
[2026-03-09 07:28:34] 2026-03-09 06:27:41,163 | INFO     | mean x: 1773030683.5
[2026-03-09 07:28:34] 2026-03-09 06:27:41,163 | INFO     | mean y: 2524389.1710526315
[2026-03-09 07:28:34] 2026-03-09 06:27:41,163 | INFO     | intersect: 29817361668.615658
[2026-03-09 07:28:34] 2026-03-09 06:27:41,163 | INFO     | chi2: 0.9924206377758277
[2026-03-09 07:28:34] 2026-03-09 06:27:41,164 | INFO     | current chi2=0.9924206377758277 (change=14.830656441661253 %)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,164 | INFO     | left removable region: 30
[2026-03-09 07:28:34] 2026-03-09 06:27:41,164 | INFO     | sum of square deviations: 2750295288.0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,166 | INFO     | sum of deviations: -23402593513.999996
[2026-03-09 07:28:34] 2026-03-09 06:27:41,166 | INFO     | mean x: 1773030958.0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,166 | INFO     | mean y: 2519305.874396135
[2026-03-09 07:28:34] 2026-03-09 06:27:41,166 | INFO     | intersect: 15089453053.990536
[2026-03-09 07:28:34] 2026-03-09 06:27:41,167 | INFO     | chi2: 0.15366719158580183
[2026-03-09 07:28:34] 2026-03-09 06:27:41,167 | INFO     | current memory leak: -8.51 B/s (using 207 data points, chi2=0.15)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,167 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,168 | INFO     | ..............................
[2026-03-09 07:28:34] 2026-03-09 06:27:41,168 | INFO     | . Timing measurements:
[2026-03-09 07:28:34] 2026-03-09 06:27:41,168 | INFO     | . get job = 0 s
[2026-03-09 07:28:34] 2026-03-09 06:27:41,168 | INFO     | . initial setup = 116 s
[2026-03-09 07:28:34] 2026-03-09 06:27:41,168 | INFO     | . payload setup = 145 s
[2026-03-09 07:28:34] 2026-03-09 06:27:41,168 | INFO     | . stage-in = 0 s
[2026-03-09 07:28:34] 2026-03-09 06:27:41,168 | INFO     | . payload execution = 14932 s
[2026-03-09 07:28:34] 2026-03-09 06:27:41,168 | INFO     | . stage-out = 4 s
[2026-03-09 07:28:34] 2026-03-09 06:27:41,168 | INFO     | . log creation = 1 s
[2026-03-09 07:28:34] 2026-03-09 06:27:41,169 | INFO     | ..............................
[2026-03-09 07:28:34] 2026-03-09 06:27:41,307 | INFO     | 
[2026-03-09 07:28:34] 2026-03-09 06:27:41,308 | INFO     | job summary report
[2026-03-09 07:28:34] 2026-03-09 06:27:41,308 | INFO     | --------------------------------------------------
[2026-03-09 07:28:34] 2026-03-09 06:27:41,308 | INFO     | PanDA job id: 7039905602
[2026-03-09 07:28:34] 2026-03-09 06:27:41,308 | INFO     | task id: 48955006
[2026-03-09 07:28:34] 2026-03-09 06:27:41,308 | INFO     | errors: (none)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,308 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 07:28:34] 2026-03-09 06:27:41,308 | INFO     | pilot state: finished 
[2026-03-09 07:28:34] 2026-03-09 06:27:41,308 | INFO     | transexitcode: 0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,308 | INFO     | exeerrorcode: 0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | exeerrordiag: 
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | exitcode: 0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | exitmsg: OK
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | cpuconsumptiontime: 54133 s
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | nevents: 400
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | neventsw: 0
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | pid: 2671
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | pgrp: 2671
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | corecount: 8
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | event service: False
[2026-03-09 07:28:34] 2026-03-09 06:27:41,309 | INFO     | sizes: {0: 2279138, 1: 2279824, 2: 2280285, 12: 2280285, 15083: 2311373, 15087: 2320373, 15090: 2320557, 15091: 2320751}
[2026-03-09 07:28:34] 2026-03-09 06:27:41,310 | INFO     | --------------------------------------------------
[2026-03-09 07:28:34] 2026-03-09 06:27:41,310 | INFO     | 
[2026-03-09 07:28:34] 2026-03-09 06:27:41,310 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-09 07:28:34] 2026-03-09 06:27:41,700 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,700 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,700 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,700 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,702 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,702 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 07:28:34] 2026-03-09 06:27:41,703 | INFO     | job 7039905602 has completed (purged errors)
[2026-03-09 07:28:34] 2026-03-09 06:27:41,703 | INFO     | overall cleanup function is called
[2026-03-09 07:28:34] 2026-03-09 06:27:42,711 | INFO     | --- collectZombieJob: --- 10, [2671]
[2026-03-09 07:28:34] 2026-03-09 06:27:42,712 | INFO     | zombie collector waiting for pid 2671
[2026-03-09 07:28:34] 2026-03-09 06:27:42,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 07:28:34] 2026-03-09 06:27:42,712 | INFO     | collected zombie processes
[2026-03-09 07:28:34] 2026-03-09 06:27:42,712 | INFO     | will attempt to kill all subprocesses of pid=2671
[2026-03-09 07:28:34] 2026-03-09 06:27:42,796 | INFO     | process IDs to be killed: [2671] (in reverse order)
[2026-03-09 07:28:34] 2026-03-09 06:27:43,637 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 07:28:34] 2026-03-09 06:27:43,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 07:28:34] 2026-03-09 06:27:43,640 | INFO     | did not find any defunct processes belonging to 2671
[2026-03-09 07:28:34] 2026-03-09 06:27:43,641 | INFO     | did not find any defunct processes belonging to 2671
[2026-03-09 07:28:34] 2026-03-09 06:27:43,641 | INFO     | ready for new job
[2026-03-09 07:28:34] 2026-03-09 06:27:43,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 07:28:34] 2026-03-09 06:27:43,644 | INFO     | **************************************
[2026-03-09 07:28:34] 2026-03-09 06:27:43,644 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 07:28:34] 2026-03-09 06:27:43,644 | INFO     | **************************************
[2026-03-09 07:28:34] 2026-03-09 06:27:43,644 | INFO     | 
[2026-03-09 07:28:34] 2026-03-09 06:27:43,645 | INFO     | pilot is running in a VM
[2026-03-09 07:28:34] 2026-03-09 06:27:43,645 | INFO     | architecture information:
[2026-03-09 07:28:34] 2026-03-09 06:27:43,665 | INFO     | executing command: cat /etc/os-release
[2026-03-09 07:28:34] 2026-03-09 06:27:43,933 | INFO     | cat /etc/os-release:
[2026-03-09 07:28:34] NAME="CentOS Linux"
[2026-03-09 07:28:34] VERSION="7 (Core)"
[2026-03-09 07:28:34] ID="centos"
[2026-03-09 07:28:34] ID_LIKE="rhel fedora"
[2026-03-09 07:28:34] VERSION_ID="7"
[2026-03-09 07:28:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 07:28:34] ANSI_COLOR="0;31"
[2026-03-09 07:28:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 07:28:34] HOME_URL="https://www.centos.org/"
[2026-03-09 07:28:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 07:28:34] 
[2026-03-09 07:28:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 07:28:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 07:28:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 07:28:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 07:28:34] 
[2026-03-09 07:28:34] 2026-03-09 06:27:43,933 | INFO     | **************************************
[2026-03-09 07:28:34] 2026-03-09 06:27:44,437 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-09 07:28:34] 2026-03-09 06:27:44,652 | INFO     | sufficient remaining disk space (493848887296 B)
[2026-03-09 07:28:34] 2026-03-09 06:27:44,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 07:28:34] 2026-03-09 06:27:44,653 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 07:28:34] 2026-03-09 06:27:44,653 | INFO     | update_server=False
[2026-03-09 07:28:34] 2026-03-09 06:27:44,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 07:28:34] 2026-03-09 06:27:44,813 | INFO     | all data control threads have been joined
[2026-03-09 07:28:34] 2026-03-09 06:27:44,835 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 07:28:34] 2026-03-09 06:27:44,836 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 07:28:34] 2026-03-09 06:27:44,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 07:28:34] 2026-03-09 06:27:44,836 | INFO     | will abort loop
[2026-03-09 07:28:34] 2026-03-09 06:27:44,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 07:28:34] 2026-03-09 06:27:45,271 | INFO     | all job control threads have been joined
[2026-03-09 07:28:34] 2026-03-09 06:27:45,659 | INFO     | [job] retrieve thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:45,819 | INFO     | [data] control thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:45,842 | INFO     | [job] job monitor thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:45,844 | INFO     | all payload control threads have been joined
[2026-03-09 07:28:34] 2026-03-09 06:27:45,873 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 07:28:34] 2026-03-09 06:27:46,278 | INFO     | [job] control thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:46,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 07:28:34] 2026-03-09 06:27:46,462 | INFO     | [payload] validate_post thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:46,671 | INFO     | [payload] failed_post thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:46,816 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:46,850 | INFO     | [payload] control thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:46,861 | INFO     | [data] copytool_out thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:46,942 | INFO     | [data] copytool_in thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:47,031 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:47,034 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:47,112 | INFO     | [job] validate thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:47,310 | INFO     | [job] queue monitor thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:49,882 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:27:54,950 | INFO     | job.realtimelogging is not enabled
[2026-03-09 07:28:34] 2026-03-09 06:27:55,956 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 07:28:34] 2026-03-09 06:28:13,010 | INFO     | PID=30613 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-09 07:28:34] 2026-03-09 06:28:13,010 | INFO     | .. there are 2 such processes running
[2026-03-09 07:28:34] 2026-03-09 06:28:13,011 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 07:28:34] 2026-03-09 06:28:13,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 07:28:34] 2026-03-09 06:28:13,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 07:28:34] 2026-03-09 06:28:23,593 | INFO     | [monitor] cgroup control has ended
[2026-03-09 07:28:34] 2026-03-09 06:28:24,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139646973826880)>', '<ExcThread(monitor, started 139646524696320)>']
[2026-03-09 07:28:34] 2026-03-09 06:28:25,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 07:28:34] 2026-03-09 06:28:25,083 | INFO     | [monitor] control thread has ended
[2026-03-09 07:28:34] 2026-03-09 06:28:29,136 | INFO     | all workflow threads have been joined
[2026-03-09 07:28:34] 2026-03-09 06:28:29,137 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 07:28:34] 2026-03-09 06:28:29,137 | INFO     | traces error code: 0
[2026-03-09 07:28:34] 2026-03-09 06:28:29,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 07:28:34] 2026-03-09 06:28:29,630 [wrapper] ==== pilot stdout END ====
[2026-03-09 07:28:34] 2026-03-09 06:28:29,774 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 07:28:34] 2026-03-09 06:28:29,907 [wrapper] pilotpid: 30613
[2026-03-09 07:28:34] 2026-03-09 06:28:30,054 [wrapper] Pilot exit status: 0
[2026-03-09 07:28:34] 2026-03-09 06:28:30,528 [wrapper] pandaids: 7039905602
[2026-03-09 07:28:34] 2026-03-09 06:28:31,616 [wrapper] cleanup supervisor_pilot  9681 30614
[2026-03-09 07:28:34] 2026-03-09 06:28:31,687 [wrapper] Test setup, not cleaning
[2026-03-09 07:28:34] 2026-03-09 06:28:31,756 [wrapper] apfmon messages muted
[2026-03-09 07:28:34] 2026-03-09 06:28:31,879 [wrapper] ==== wrapper stdout END ====
[2026-03-09 07:28:34] 2026-03-09 06:28:31,979 [wrapper] ==== wrapper stderr END ====
[2026-03-09 07:28:34]  *** Error codes and diagnostics ***
[2026-03-09 07:28:34]     "exeErrorCode": 0,
[2026-03-09 07:28:34]     "exeErrorDiag": "",
[2026-03-09 07:28:34]     "pilotErrorCode": 0,
[2026-03-09 07:28:34]     "pilotErrorDiag": "",
[2026-03-09 07:28:34]  *** Listing of results directory ***
[2026-03-09 07:28:34] total 624776
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc    602657 Feb  3 12:11 pilot3.tar.gz
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc      5111 Mar  8 14:48 queuedata.json
[2026-03-09 07:28:34] -rwx------. 1 boinc boinc     36322 Mar  8 14:49 runpilot2-wrapper.sh
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc       100 Mar  9 03:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 07:28:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 03:09 run_atlas
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc       105 Mar  9 03:09 job.xml
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc      6392 Mar  9 03:09 init_data.xml
[2026-03-09 07:28:34] -rw-r--r--. 2 boinc boinc 442987813 Mar  9 03:09 EVNT.46701403._000526.pool.root.1
[2026-03-09 07:28:34] -rw-r--r--. 2 boinc boinc     15845 Mar  9 03:09 start_atlas.sh
[2026-03-09 07:28:34] drwxrwx--x. 2 boinc boinc        68 Mar  9 03:09 shared
[2026-03-09 07:28:34] -rw-r--r--. 2 boinc boinc    616305 Mar  9 03:09 input.tar.gz
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc         0 Mar  9 03:09 boinc_lockfile
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc      2563 Mar  9 03:10 pandaJob.out
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc       415 Mar  9 03:15 workernode_map.json
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc    999108 Mar  9 03:15 agis_schedconf.cvmfs.json
[2026-03-09 07:28:34] drwx------. 7 boinc boinc      4096 Mar  9 03:15 pilot3
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc 187664560 Mar  9 07:26 HITS.48955006._026270.pool.root.1
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc       532 Mar  9 07:26 boinc_task_state.xml
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc      1011 Mar  9 07:27 memory_monitor_summary.json
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc   1511578 Mar  9 07:27 agis_ddmendpoints.agis.ALL.json
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc    458463 Mar  9 07:27 log.48955006._026270.job.log.tgz.1
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc      6320 Mar  9 07:27 heartbeat.json
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc        95 Mar  9 07:28 pilot_heartbeat.json
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc      8192 Mar  9 07:28 boinc_mmap_file
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc        28 Mar  9 07:28 wrapper_checkpoint.txt
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc      5139 Mar  9 07:28 pilotlog.txt
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc   2124888 Mar  9 07:28 log.48955006._026270.job.log.1
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc       357 Mar  9 07:28 output.list
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc       620 Mar  9 07:28 runtime_log
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc   2600960 Mar  9 07:28 result.tar.gz
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc      8832 Mar  9 07:28 runtime_log.err
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc       656 Mar  9 07:28 FdzMDmKgTJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQrWLDmC593Cn.diag
[2026-03-09 07:28:34] -rw-r--r--. 1 boinc boinc     20701 Mar  9 07:28 stderr.txt
[2026-03-09 07:28:34] HITS file was successfully produced:
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc 187664560 Mar  9 07:26 shared/HITS.pool.root.1
[2026-03-09 07:28:34]  *** Contents of shared directory: ***
[2026-03-09 07:28:34] total 619036
[2026-03-09 07:28:34] -rw-r--r--. 2 boinc boinc 442987813 Mar  9 03:09 ATLAS.root_0
[2026-03-09 07:28:34] -rw-r--r--. 2 boinc boinc     15845 Mar  9 03:09 start_atlas.sh
[2026-03-09 07:28:34] -rw-r--r--. 2 boinc boinc    616305 Mar  9 03:09 input.tar.gz
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc 187664560 Mar  9 07:26 HITS.pool.root.1
[2026-03-09 07:28:34] -rw-------. 1 boinc boinc   2600960 Mar  9 07:28 result.tar.gz
07:28:36 (26595): run_atlas exited; CPU time 54299.274219
07:28:36 (26595): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN