Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:29:12 (879558): wrapper (7.7.26015): starting
06:29:12 (879558): wrapper: running run_atlas (--nthreads 3)
[2026-03-09 06:29:12] Arguments: --nthreads 3
[2026-03-09 06:29:12] Threads: 3
[2026-03-09 06:29:12] Checking for CVMFS
[2026-03-09 06:29:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 06:29:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 06:29:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 06:29:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 06:29:12] 2.9.2.0 55440 5457 84228 157066 2 49 28043768 36864001 0 130560 0 2321341 99.984 210560 14205 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-09 06:29:12] CVMFS is ok
[2026-03-09 06:29:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 06:29:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 06:29:12] Further information can be found at the LHC@home message board.
[2026-03-09 06:29:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 06:29:12] Checking for apptainer binary...
[2026-03-09 06:29:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 06:29:12] Running /usr/bin/apptainer --version
[2026-03-09 06:29:13] apptainer version 1.4.1-1.1
[2026-03-09 06:29:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 06:29:13] thA361a
[2026-03-09 06:29:13] apptainer works
[2026-03-09 06:29:13] Set ATHENA_PROC_NUMBER=3
[2026-03-09 06:29:13] Set ATHENA_CORE_NUMBER=3
[2026-03-09 06:29:13] Starting ATLAS job with PandaID=7045941256
[2026-03-09 06:29:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 08:31:37]  *** The last 200 lines of the pilot log: ***
[2026-03-09 08:31:37] 2026-03-09 07:30:55,595 | INFO     | extracted standard info from prmon json
[2026-03-09 08:31:37] 2026-03-09 07:30:55,595 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 08:31:37] 2026-03-09 07:30:55,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 08:31:37] 2026-03-09 07:30:55,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 08:31:37] 2026-03-09 07:30:55,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 08:31:37] 2026-03-09 07:30:55,596 | INFO     | fitting pss+swap vs Time
[2026-03-09 08:31:37] 2026-03-09 07:30:55,596 | INFO     | sum of square deviations: 535786790.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,596 | INFO     | sum of deviations: -18746891978.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,596 | INFO     | mean x: 1773037809.5
[2026-03-09 08:31:37] 2026-03-09 07:30:55,596 | INFO     | mean y: 2426922.6333333333
[2026-03-09 08:31:37] 2026-03-09 07:30:55,596 | INFO     | intersect: 62040067469.17656
[2026-03-09 08:31:37] 2026-03-09 07:30:55,596 | INFO     | chi2: 2.266394489931141
[2026-03-09 08:31:37] 2026-03-09 07:30:55,596 | INFO     | sum of square deviations: 471562330.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | sum of deviations: -10647765512.99999
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | mean x: 1773037657.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | mean y: 2445608.6173913046
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | intersect: 40037215174.40291
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | chi2: 1.6434034778230786
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | current chi2=1.6434034778230786 (change=27.488198320098746 %)
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | sum of square deviations: 412686807.5
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | sum of deviations: -9506762282.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | mean x: 1773037504.5
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | mean y: 2448567.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | intersect: 40846608753.41935
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | chi2: 1.642009824370052
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | current chi2=1.642009824370052 (change=0.08480287840650352 %)
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | right removable region: 109
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | sum of square deviations: 471562330.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | sum of deviations: -34898206628.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,597 | INFO     | mean x: 1773037962.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | mean y: 2464390.7739130436
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | intersect: 131217027600.61302
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | chi2: 0.7635776963540662
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | current chi2=0.7635776963540662 (change=66.30870310767189 %)
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | sum of square deviations: 412686807.5
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | sum of deviations: -30222111175.5
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | mean x: 1773038114.5
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | mean y: 2452256.209090909
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | intersect: 129846571430.8156
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | chi2: 0.7619410351958277
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | current chi2=0.7619410351958277 (change=0.2143411424997494 %)
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | left removable region: 20
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | sum of square deviations: 218571540.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | sum of deviations: -11863329410.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | mean x: 1773038084.0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | mean y: 2447258.1011235956
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | intersect: 96237002072.36125
[2026-03-09 08:31:37] 2026-03-09 07:30:55,598 | INFO     | chi2: 0.06419105438289412
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | current memory leak: -54.28 B/s (using 89 data points, chi2=0.06)
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | could have reported an average CPU frequency of 3774 MHz (8 samples)
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | ..............................
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | . Timing measurements:
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | . get job = 0 s
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | . initial setup = 3 s
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | . payload setup = 3 s
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | . stage-in = 0 s
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | . payload execution = 7271 s
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | . stage-out = 0 s
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | . log creation = 0 s
[2026-03-09 08:31:37] 2026-03-09 07:30:55,599 | INFO     | ..............................
[2026-03-09 08:31:37] 2026-03-09 07:30:55,625 | INFO     | 
[2026-03-09 08:31:37] 2026-03-09 07:30:55,625 | INFO     | job summary report
[2026-03-09 08:31:37] 2026-03-09 07:30:55,625 | INFO     | --------------------------------------------------
[2026-03-09 08:31:37] 2026-03-09 07:30:55,625 | INFO     | PanDA job id: 7045941256
[2026-03-09 08:31:37] 2026-03-09 07:30:55,625 | INFO     | task id: 48997968
[2026-03-09 08:31:37] 2026-03-09 07:30:55,625 | INFO     | errors: (none)
[2026-03-09 08:31:37] 2026-03-09 07:30:55,625 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 08:31:37] 2026-03-09 07:30:55,625 | INFO     | pilot state: finished 
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | transexitcode: 0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | exeerrorcode: 0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | exeerrordiag: 
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | exitcode: 0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | exitmsg: OK
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | cpuconsumptiontime: 21061 s
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | nevents: 400
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | neventsw: 0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | pid: 888027
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | pgrp: 888027
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | corecount: 3
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | event service: False
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | sizes: {0: 2280238, 11: 2280238, 7278: 2316752, 7281: 2316946}
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | --------------------------------------------------
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | 
[2026-03-09 08:31:37] 2026-03-09 07:30:55,626 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | job 7045941256 has completed (purged errors)
[2026-03-09 08:31:37] 2026-03-09 07:30:55,639 | INFO     | overall cleanup function is called
[2026-03-09 08:31:37] 2026-03-09 07:30:56,646 | INFO     | --- collectZombieJob: --- 10, [888027]
[2026-03-09 08:31:37] 2026-03-09 07:30:56,646 | INFO     | zombie collector waiting for pid 888027
[2026-03-09 08:31:37] 2026-03-09 07:30:56,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 08:31:37] 2026-03-09 07:30:56,646 | INFO     | collected zombie processes
[2026-03-09 08:31:37] 2026-03-09 07:30:56,646 | INFO     | will attempt to kill all subprocesses of pid=888027
[2026-03-09 08:31:37] 2026-03-09 07:30:56,688 | INFO     | process IDs to be killed: [888027] (in reverse order)
[2026-03-09 08:31:37] 2026-03-09 07:30:56,714 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 08:31:37] 2026-03-09 07:30:56,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 08:31:37] 2026-03-09 07:30:56,716 | INFO     | did not find any defunct processes belonging to 888027
[2026-03-09 08:31:37] 2026-03-09 07:30:56,717 | INFO     | did not find any defunct processes belonging to 888027
[2026-03-09 08:31:37] 2026-03-09 07:30:56,717 | INFO     | ready for new job
[2026-03-09 08:31:37] 2026-03-09 07:30:56,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 08:31:37] 2026-03-09 07:30:56,718 | INFO     | **************************************
[2026-03-09 08:31:37] 2026-03-09 07:30:56,718 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 08:31:37] 2026-03-09 07:30:56,718 | INFO     | **************************************
[2026-03-09 08:31:37] 2026-03-09 07:30:56,718 | INFO     | 
[2026-03-09 08:31:37] 2026-03-09 07:30:56,718 | INFO     | architecture information:
[2026-03-09 08:31:37] 2026-03-09 07:30:56,718 | INFO     | executing command: cat /etc/os-release
[2026-03-09 08:31:37] 2026-03-09 07:30:56,727 | INFO     | cat /etc/os-release:
[2026-03-09 08:31:37] NAME="CentOS Linux"
[2026-03-09 08:31:37] VERSION="7 (Core)"
[2026-03-09 08:31:37] ID="centos"
[2026-03-09 08:31:37] ID_LIKE="rhel fedora"
[2026-03-09 08:31:37] VERSION_ID="7"
[2026-03-09 08:31:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 08:31:37] ANSI_COLOR="0;31"
[2026-03-09 08:31:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 08:31:37] HOME_URL="https://www.centos.org/"
[2026-03-09 08:31:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 08:31:37] 
[2026-03-09 08:31:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 08:31:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 08:31:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 08:31:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 08:31:37] 
[2026-03-09 08:31:37] 2026-03-09 07:30:56,727 | INFO     | **************************************
[2026-03-09 08:31:37] 2026-03-09 07:30:57,231 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-09 08:31:37] 2026-03-09 07:30:57,244 | INFO     | sufficient remaining disk space (273863933952 B)
[2026-03-09 08:31:37] 2026-03-09 07:30:57,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 08:31:37] 2026-03-09 07:30:57,244 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 08:31:37] 2026-03-09 07:30:57,244 | INFO     | update_server=False
[2026-03-09 08:31:37] 2026-03-09 07:30:57,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 08:31:37] 2026-03-09 07:30:57,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 08:31:37] 2026-03-09 07:30:57,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 08:31:37] 2026-03-09 07:30:57,626 | INFO     | all data control threads have been joined
[2026-03-09 08:31:37] 2026-03-09 07:30:58,024 | INFO     | all job control threads have been joined
[2026-03-09 08:31:37] 2026-03-09 07:30:58,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 08:31:37] 2026-03-09 07:30:58,250 | INFO     | [job] retrieve thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:58,250 | INFO     | [job] queue monitor thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:58,287 | INFO     | all payload control threads have been joined
[2026-03-09 08:31:37] 2026-03-09 07:30:58,318 | INFO     | [data] copytool_in thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:58,537 | WARNING  | process 888027 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 08:31:37] 2026-03-09 07:30:58,566 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 08:31:37] 2026-03-09 07:30:58,602 | INFO     | number of running child processes to parent process 888027: 1
[2026-03-09 08:31:37] 2026-03-09 07:30:58,602 | INFO     | maximum number of monitored processes: 6
[2026-03-09 08:31:37] 2026-03-09 07:30:58,602 | INFO     | aborting job monitoring since job object (job id=7045941256) has expired
[2026-03-09 08:31:37] 2026-03-09 07:30:58,602 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 08:31:37] 2026-03-09 07:30:58,602 | INFO     | will abort loop
[2026-03-09 08:31:37] 2026-03-09 07:30:58,631 | INFO     | [data] control thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:58,869 | INFO     | job.realtimelogging is not enabled
[2026-03-09 08:31:37] 2026-03-09 07:30:59,029 | INFO     | [job] control thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:59,134 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:59,293 | INFO     | [payload] control thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:59,563 | INFO     | [payload] validate_post thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:59,573 | INFO     | [job] validate thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:59,608 | INFO     | [job] job monitor thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:59,626 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:59,681 | INFO     | [payload] failed_post thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:59,693 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:30:59,875 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:31:00,072 | INFO     | [data] copytool_out thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:31:01,249 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 08:31:37] 2026-03-09 07:31:27,278 | INFO     | PID=883597 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 08:31:37] 2026-03-09 07:31:27,278 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 08:31:37] 2026-03-09 07:31:27,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 08:31:37] 2026-03-09 07:31:27,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 08:31:37] 2026-03-09 07:31:30,585 | INFO     | [monitor] cgroup control has ended
[2026-03-09 08:31:37] 2026-03-09 07:31:32,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851610380096)>', '<ExcThread(monitor, started 139851327616768)>']
[2026-03-09 08:31:37] 2026-03-09 07:31:33,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 08:31:37] 2026-03-09 07:31:33,311 | INFO     | [monitor] control thread has ended
[2026-03-09 08:31:37] 2026-03-09 07:31:37,622 | INFO     | all workflow threads have been joined
[2026-03-09 08:31:37] 2026-03-09 07:31:37,622 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 08:31:37] 2026-03-09 07:31:37,622 | INFO     | traces error code: 0
[2026-03-09 08:31:37] 2026-03-09 07:31:37,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 08:31:37] 2026-03-09 07:31:37,673 [wrapper] ==== pilot stdout END ====
[2026-03-09 08:31:37] 2026-03-09 07:31:37,676 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 08:31:37] 2026-03-09 07:31:37,678 [wrapper] pilotpid: 883597
[2026-03-09 08:31:37] 2026-03-09 07:31:37,681 [wrapper] Pilot exit status: 0
[2026-03-09 08:31:37] 2026-03-09 07:31:37,689 [wrapper] pandaids: 7045941256
[2026-03-09 08:31:37] 2026-03-09 07:31:37,706 [wrapper] cleanup supervisor_pilot  893811 883598
[2026-03-09 08:31:37] 2026-03-09 07:31:37,709 [wrapper] Test setup, not cleaning
[2026-03-09 08:31:37] 2026-03-09 07:31:37,711 [wrapper] apfmon messages muted
[2026-03-09 08:31:37] 2026-03-09 07:31:37,713 [wrapper] ==== wrapper stdout END ====
[2026-03-09 08:31:37] 2026-03-09 07:31:37,716 [wrapper] ==== wrapper stderr END ====
[2026-03-09 08:31:37]  *** Error codes and diagnostics ***
[2026-03-09 08:31:37]     "exeErrorCode": 0,
[2026-03-09 08:31:37]     "exeErrorDiag": "",
[2026-03-09 08:31:37]     "pilotErrorCode": 0,
[2026-03-09 08:31:37]     "pilotErrorDiag": "",
[2026-03-09 08:31:37]  *** Listing of results directory ***
[2026-03-09 08:31:37] total 644692
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc    584627 Mar  8 08:19 pilot3.tar.gz
[2026-03-09 08:31:37] -rwx------ 1 boinc boinc     36322 Mar  8 08:19 runpilot2-wrapper.sh
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc      5111 Mar  8 08:19 queuedata.json
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc       100 Mar  9 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 08:31:37] -rwxr-xr-x 1 boinc boinc      7986 Mar  9 06:29 run_atlas
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc       105 Mar  9 06:29 job.xml
[2026-03-09 08:31:37] -rw-r--r-- 2 boinc boinc 365893805 Mar  9 06:29 EVNT.48997965._000025.pool.root.1
[2026-03-09 08:31:37] -rw-r--r-- 2 boinc boinc    597955 Mar  9 06:29 input.tar.gz
[2026-03-09 08:31:37] -rw-r--r-- 2 boinc boinc     15845 Mar  9 06:29 start_atlas.sh
[2026-03-09 08:31:37] drwxrwx--x 2 boinc boinc      4096 Mar  9 06:29 shared
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc         0 Mar  9 06:29 boinc_setup_complete
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc      6448 Mar  9 06:29 init_data.xml
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc         0 Mar  9 06:29 boinc_lockfile
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc      2565 Mar  9 06:29 pandaJob.out
[2026-03-09 08:31:37] -rw------- 1 boinc boinc    999108 Mar  9 06:29 agis_schedconf.cvmfs.json
[2026-03-09 08:31:37] -rw------- 1 boinc boinc   1511578 Mar  9 06:29 agis_ddmendpoints.agis.ALL.json
[2026-03-09 08:31:37] -rw------- 1 boinc boinc       416 Mar  9 06:29 workernode_map.json
[2026-03-09 08:31:37] drwx------ 5 boinc boinc      4096 Mar  9 06:29 pilot3
[2026-03-09 08:31:37] -rw------- 1 boinc boinc 287646742 Mar  9 08:30 HITS.48997968._000620.pool.root.1
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc       530 Mar  9 08:30 boinc_task_state.xml
[2026-03-09 08:31:37] -rw------- 1 boinc boinc      1017 Mar  9 08:30 memory_monitor_summary.json
[2026-03-09 08:31:37] -rw------- 1 boinc boinc    297055 Mar  9 08:30 log.48997968._000620.job.log.tgz.1
[2026-03-09 08:31:37] -rw------- 1 boinc boinc      6283 Mar  9 08:30 heartbeat.json
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc      8192 Mar  9 08:31 boinc_mmap_file
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc        27 Mar  9 08:31 wrapper_checkpoint.txt
[2026-03-09 08:31:37] -rw------- 1 boinc boinc        95 Mar  9 08:31 pilot_heartbeat.json
[2026-03-09 08:31:37] -rw------- 1 boinc boinc      5341 Mar  9 08:31 pilotlog.txt
[2026-03-09 08:31:37] -rw------- 1 boinc boinc   1048853 Mar  9 08:31 log.48997968._000620.job.log.1
[2026-03-09 08:31:37] -rw------- 1 boinc boinc       357 Mar  9 08:31 output.list
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc       620 Mar  9 08:31 runtime_log
[2026-03-09 08:31:37] -rw------- 1 boinc boinc   1361920 Mar  9 08:31 result.tar.gz
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc      8901 Mar  9 08:31 runtime_log.err
[2026-03-09 08:31:37] -rw------- 1 boinc boinc       658 Mar  9 08:31 TLZNDmObNJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK5VLDm3mUPXo.diag
[2026-03-09 08:31:37] -rw-r--r-- 1 boinc boinc     20972 Mar  9 08:31 stderr.txt
[2026-03-09 08:31:37] HITS file was successfully produced:
[2026-03-09 08:31:37] -rw------- 1 boinc boinc 287646742 Mar  9 08:30 shared/HITS.pool.root.1
[2026-03-09 08:31:37]  *** Contents of shared directory: ***
[2026-03-09 08:31:37] total 640168
[2026-03-09 08:31:37] -rw-r--r-- 2 boinc boinc 365893805 Mar  9 06:29 ATLAS.root_0
[2026-03-09 08:31:37] -rw-r--r-- 2 boinc boinc    597955 Mar  9 06:29 input.tar.gz
[2026-03-09 08:31:37] -rw-r--r-- 2 boinc boinc     15845 Mar  9 06:29 start_atlas.sh
[2026-03-09 08:31:37] -rw------- 1 boinc boinc 287646742 Mar  9 08:30 HITS.pool.root.1
[2026-03-09 08:31:37] -rw------- 1 boinc boinc   1361920 Mar  9 08:31 result.tar.gz
08:31:39 (879558): run_atlas exited; CPU time 21096.038942
08:31:39 (879558): called boinc_finish(0)

</stderr_txt>
]]>

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