Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:51:58 (646321): wrapper (7.7.26015): starting
10:51:58 (646321): wrapper: running run_atlas (--nthreads 12)
[2026-03-08 10:51:58] Arguments: --nthreads 12
[2026-03-08 10:51:58] Threads: 12
[2026-03-08 10:51:58] Checking for CVMFS
[2026-03-08 10:51:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 10:51:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 10:51:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 10:51:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 10:51:58] 2.11.5.0 444197 140393 226620 157048 1 627 29716836 45568001 14109 130560 0 1277654430 99.811 746675161 19720 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-08 10:51:58] CVMFS is ok
[2026-03-08 10:51:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 10:51:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 10:51:58] Further information can be found at the LHC@home message board.
[2026-03-08 10:51:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 10:51:58] Checking for apptainer binary...
[2026-03-08 10:51:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 10:51:58] Running /usr/bin/apptainer --version
[2026-03-08 10:51:58] apptainer version 1.4.1-1.el9
[2026-03-08 10:51:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 10:51:58] wns0087.triumf.lcg
[2026-03-08 10:51:58] apptainer works
[2026-03-08 10:51:58] Set ATHENA_PROC_NUMBER=12
[2026-03-08 10:51:58] Set ATHENA_CORE_NUMBER=12
[2026-03-08 10:51:58] Starting ATLAS job with PandaID=7039873967
[2026-03-08 10:51:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 10:55:20]  *** The last 200 lines of the pilot log: ***
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | INFO     | will not add max space = 0 B to job metrics
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | WARNING  | wrong length of table data, x=[1772992353.0], y=[1470.0] (must be same and length>=4)
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | INFO     | could have reported an average CPU frequency of 2603 MHz (4 samples)
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | INFO     | ..............................
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . Timing measurements:
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . get job = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . initial setup = 7 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . payload setup = 4 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . stage-in = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . payload execution = 16 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . stage-out = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . log creation = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | ..............................
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7039873967/pilotlog.txt
[2026-03-08 10:55:20] 2026-03-08 17:54:46,986 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-08 10:55:20] - Log from pilotlog.txt -
[2026-03-08 10:55:20] 2026-03-08 17:54:46,973 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 10:55:20] 2026-03-08 17:54:46,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | WARNING  | found no stored workdir sizes
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | INFO     | will not add max space = 0 B to job metrics
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | WARNING  | wrong length of table data, x=[1772992353.0], y=[1470.0] (must be same and length>=4)
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | INFO     | could have reported an average CPU frequency of 2603 MHz (4 samples)
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | INFO     | ..............................
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . Timing measurements:
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . get job = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . initial setup = 7 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . payload setup = 4 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . stage-in = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . payload execution = 16 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . stage-out = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . log creation = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | ..............................
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7039873967/pilotlog.txt
[2026-03-08 10:55:20] 2026-03-08 17:54:46,987 | WARNING  | 
[2026-03-08 10:55:20] [begin log extracts]
[2026-03-08 10:55:20] - Log from pilotlog.txt -
[2026-03-08 10:55:20] 2026-03-08 17:54:46,973 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 10:55:20] 2026-03-08 17:54:46,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | WARNING  | found no stored workdir sizes
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | INFO     | will not add max space = 0 B to job metrics
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | WARNING  | wrong length of table data, x=[1772992353.0], y=[1470.0] (must be same and length>=4)
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | INFO     | could have reported an average CPU frequency of 2603 MHz (4 samples)
[2026-03-08 10:55:20] 2026-03-08 17:54:46,974 | INFO     | ..............................
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . Timing measurements:
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . get job = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . initial setup = 7 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . payload setup = 4 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . stage-in = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . payload execution = 16 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . stage-out = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | . log creation = 0 s
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | ..............................
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-08 10:55:20] 2026-03-08 17:54:46,975 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7039873967/pilotlog.txt
[2026-03-08 10:55:20] [end log extracts]
[2026-03-08 10:55:20] 2026-03-08 17:54:46,987 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-08 10:55:20] 2026-03-08 17:54:46,988 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-08 10:55:20] 2026-03-08 17:54:47,388 | INFO     | 
[2026-03-08 10:55:20] 2026-03-08 17:54:47,388 | INFO     | job summary report
[2026-03-08 10:55:20] 2026-03-08 17:54:47,388 | INFO     | --------------------------------------------------
[2026-03-08 10:55:20] 2026-03-08 17:54:47,388 | INFO     | PanDA job id: 7039873967
[2026-03-08 10:55:20] 2026-03-08 17:54:47,388 | INFO     | task id: 48955006
[2026-03-08 10:55:20] 2026-03-08 17:54:47,388 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-08 10:52:40,294 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | pilot state: failed 
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | transexitcode: 65
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | exeerrorcode: 65
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | exitcode: 65
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | cpuconsumptiontime: 13 s
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | nevents: 0
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | neventsw: 0
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | pid: 654475
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | pgrp: 654475
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | corecount: 12
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | event service: False
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | sizes: {0: 2294715, 1: 2295830, 11: 2295830, 25: 2319216, 26: 2323508, 27: 2323536, 144: 2323830}
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | --------------------------------------------------
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | 
[2026-03-08 10:55:20] 2026-03-08 17:54:47,389 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | job 7039873967 has completed (purged errors)
[2026-03-08 10:55:20] 2026-03-08 17:54:47,407 | INFO     | overall cleanup function is called
[2026-03-08 10:55:20] 2026-03-08 17:54:47,680 | INFO     | PID=649966 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 10:55:20] 2026-03-08 17:54:47,680 | INFO     | .. there are 17 such processes running
[2026-03-08 10:55:20] 2026-03-08 17:54:48,414 | INFO     | --- collectZombieJob: --- 10, [654475]
[2026-03-08 10:55:20] 2026-03-08 17:54:48,414 | INFO     | zombie collector waiting for pid 654475
[2026-03-08 10:55:20] 2026-03-08 17:54:48,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 10:55:20] 2026-03-08 17:54:48,414 | INFO     | collected zombie processes
[2026-03-08 10:55:20] 2026-03-08 17:54:48,414 | INFO     | will attempt to kill all subprocesses of pid=654475
[2026-03-08 10:55:20] 2026-03-08 17:54:48,549 | INFO     | process IDs to be killed: [654475] (in reverse order)
[2026-03-08 10:55:20] 2026-03-08 17:54:48,604 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 10:55:20] 2026-03-08 17:54:48,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 10:55:20] 2026-03-08 17:54:48,610 | INFO     | did not find any defunct processes belonging to 654475
[2026-03-08 10:55:20] 2026-03-08 17:54:48,616 | INFO     | did not find any defunct processes belonging to 654475
[2026-03-08 10:55:20] 2026-03-08 17:54:48,616 | INFO     | ready for new job
[2026-03-08 10:55:20] 2026-03-08 17:54:48,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 10:55:20] 2026-03-08 17:54:48,617 | INFO     | **************************************
[2026-03-08 10:55:20] 2026-03-08 17:54:48,617 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 10:55:20] 2026-03-08 17:54:48,618 | INFO     | **************************************
[2026-03-08 10:55:20] 2026-03-08 17:54:48,618 | INFO     | 
[2026-03-08 10:55:20] 2026-03-08 17:54:48,619 | INFO     | architecture information:
[2026-03-08 10:55:20] 2026-03-08 17:54:48,620 | INFO     | executing command: cat /etc/os-release
[2026-03-08 10:55:20] 2026-03-08 17:54:48,629 | INFO     | cat /etc/os-release:
[2026-03-08 10:55:20] NAME="CentOS Linux"
[2026-03-08 10:55:20] VERSION="7 (Core)"
[2026-03-08 10:55:20] ID="centos"
[2026-03-08 10:55:20] ID_LIKE="rhel fedora"
[2026-03-08 10:55:20] VERSION_ID="7"
[2026-03-08 10:55:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 10:55:20] ANSI_COLOR="0;31"
[2026-03-08 10:55:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 10:55:20] HOME_URL="https://www.centos.org/"
[2026-03-08 10:55:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 10:55:20] 
[2026-03-08 10:55:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 10:55:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 10:55:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 10:55:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 10:55:20] 
[2026-03-08 10:55:20] 2026-03-08 17:54:48,629 | INFO     | **************************************
[2026-03-08 10:55:20] 2026-03-08 17:54:49,132 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-08 10:55:20] 2026-03-08 17:54:49,144 | INFO     | sufficient remaining disk space (2172323364864 B)
[2026-03-08 10:55:20] 2026-03-08 17:54:49,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 10:55:20] 2026-03-08 17:54:49,145 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 10:55:20] 2026-03-08 17:54:49,145 | INFO     | update_server=False
[2026-03-08 10:55:20] 2026-03-08 17:54:49,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 10:55:20] 2026-03-08 17:54:49,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 10:55:20] 2026-03-08 17:54:49,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 10:55:20] 2026-03-08 17:54:49,146 | INFO     | aborting loop
[2026-03-08 10:55:20] 2026-03-08 17:54:49,370 | INFO     | all job control threads have been joined
[2026-03-08 10:55:20] 2026-03-08 17:54:49,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 10:55:20] 2026-03-08 17:54:50,150 | INFO     | [job] retrieve thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:50,151 | INFO     | [job] job monitor thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:50,154 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:50,182 | INFO     | all data control threads have been joined
[2026-03-08 10:55:20] 2026-03-08 17:54:50,241 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:50,329 | INFO     | [data] copytool_in thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:50,355 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:50,375 | INFO     | [job] control thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:50,448 | INFO     | all payload control threads have been joined
[2026-03-08 10:55:20] 2026-03-08 17:54:50,659 | INFO     | [payload] failed_post thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:51,188 | INFO     | [data] control thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:51,393 | INFO     | [data] copytool_out thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:51,414 | INFO     | [job] validate thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:51,453 | INFO     | [payload] control thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:51,530 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:51,707 | INFO     | [payload] validate_post thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:52,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 10:55:20] 2026-03-08 17:54:53,057 | INFO     | [job] queue monitor thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:54:53,158 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 10:55:20] 2026-03-08 17:55:12,206 | INFO     | [monitor] cgroup control has ended
[2026-03-08 10:55:20] 2026-03-08 17:55:13,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935984125760)>', '<ExcThread(monitor, started 139935436748544)>']
[2026-03-08 10:55:20] 2026-03-08 17:55:18,784 | INFO     | all workflow threads have been joined
[2026-03-08 10:55:20] 2026-03-08 17:55:18,784 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 10:55:20] 2026-03-08 17:55:18,784 | INFO     | traces error code: 0
[2026-03-08 10:55:20] 2026-03-08 17:55:18,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 10:55:20] 2026-03-08 17:55:19,874 | INFO     | PID=649966 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 10:55:20] 2026-03-08 17:55:19,874 | INFO     | .. there are 17 such processes running
[2026-03-08 10:55:20] 2026-03-08 17:55:19,875 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 10:55:20] 2026-03-08 17:55:19,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 10:55:20] 2026-03-08 17:55:19,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 10:55:20] 2026-03-08 17:55:19,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 10:55:20] 2026-03-08 17:55:19,875 | INFO     | [monitor] control thread has ended
[2026-03-08 10:55:20] 2026-03-08 17:55:19,977 [wrapper] ==== pilot stdout END ====
[2026-03-08 10:55:20] 2026-03-08 17:55:19,980 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 10:55:20] 2026-03-08 17:55:19,982 [wrapper] pilotpid: 649966
[2026-03-08 10:55:20] 2026-03-08 17:55:19,984 [wrapper] Pilot exit status: 0
[2026-03-08 10:55:20] 2026-03-08 17:55:19,992 [wrapper] pandaids: 7039873967
[2026-03-08 10:55:20] 2026-03-08 17:55:20,029 [wrapper] cleanup supervisor_pilot  649972 649967
[2026-03-08 10:55:20] 2026-03-08 17:55:20,032 [wrapper] Test setup, not cleaning
[2026-03-08 10:55:20] 2026-03-08 17:55:20,034 [wrapper] apfmon messages muted
[2026-03-08 10:55:20] 2026-03-08 17:55:20,036 [wrapper] ==== wrapper stdout END ====
[2026-03-08 10:55:20] 2026-03-08 17:55:20,039 [wrapper] ==== wrapper stderr END ====
[2026-03-08 10:55:20]  *** Error codes and diagnostics ***
[2026-03-08 10:55:20]     "exeErrorCode": 65,
[2026-03-08 10:55:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-08 10:55:20]     "pilotErrorCode": 1305,
[2026-03-08 10:55:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-08 10:55:20]  *** Listing of results directory ***
[2026-03-08 10:55:20] total 432180
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc    584627 Mar  8 06:03 pilot3.tar.gz
[2026-03-08 10:55:20] -rwx------. 1 boinc boinc     36322 Mar  8 06:08 runpilot2-wrapper.sh
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc      5111 Mar  8 06:08 queuedata.json
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc       100 Mar  8 10:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 10:55:20] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 10:51 run_atlas
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc       105 Mar  8 10:51 job.xml
[2026-03-08 10:55:20] -rw-r--r--. 2 boinc boinc 438419447 Mar  8 10:51 EVNT.46701403._000515.pool.root.1
[2026-03-08 10:55:20] -rw-r--r--. 2 boinc boinc    597959 Mar  8 10:51 input.tar.gz
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc      6594 Mar  8 10:51 init_data.xml
[2026-03-08 10:55:20] -rw-r--r--. 2 boinc boinc     15845 Mar  8 10:51 start_atlas.sh
[2026-03-08 10:55:20] drwxrwx--x. 2 boinc boinc      4096 Mar  8 10:51 shared
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc         0 Mar  8 10:51 boinc_lockfile
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc      2564 Mar  8 10:51 pandaJob.out
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc    999212 Mar  8 10:52 agis_schedconf.cvmfs.json
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc   1521291 Mar  8 10:52 agis_ddmendpoints.agis.ALL.json
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc       445 Mar  8 10:52 workernode_map.json
[2026-03-08 10:55:20] drwx------. 5 boinc boinc      4096 Mar  8 10:52 pilot3
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc       521 Mar  8 10:52 boinc_task_state.xml
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc       990 Mar  8 10:52 memory_monitor_summary.json
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc     20896 Mar  8 10:52 log.48955006._025737.job.log.tgz.1
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc      7042 Mar  8 10:54 heartbeat.json
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc      8192 Mar  8 10:55 boinc_mmap_file
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc        22 Mar  8 10:55 wrapper_checkpoint.txt
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc        95 Mar  8 10:55 pilot_heartbeat.json
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc       822 Mar  8 10:55 pilotlog.txt
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc     80860 Mar  8 10:55 log.48955006._025737.job.log.1
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc       188 Mar  8 10:55 output.list
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc       620 Mar  8 10:55 runtime_log
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc    122880 Mar  8 10:55 result.tar.gz
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc      8635 Mar  8 10:55 runtime_log.err
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc       644 Mar  8 10:55 ocyNDme2SJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGGZLDm9r06mn.diag
[2026-03-08 10:55:20] -rw-r--r--. 1 boinc boinc     21754 Mar  8 10:55 stderr.txt
[2026-03-08 10:55:20] No HITS result produced
[2026-03-08 10:55:20]  *** Contents of shared directory: ***
[2026-03-08 10:55:20] total 428868
[2026-03-08 10:55:20] -rw-r--r--. 2 boinc boinc 438419447 Mar  8 10:51 ATLAS.root_0
[2026-03-08 10:55:20] -rw-r--r--. 2 boinc boinc    597959 Mar  8 10:51 input.tar.gz
[2026-03-08 10:55:20] -rw-r--r--. 2 boinc boinc     15845 Mar  8 10:51 start_atlas.sh
[2026-03-08 10:55:20] -rw-------. 1 boinc boinc    122880 Mar  8 10:55 result.tar.gz
10:55:21 (646321): run_atlas exited; CPU time 16.085611
10:55:21 (646321): called boinc_finish(0)

</stderr_txt>
]]>

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