Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:40:39 (644344): wrapper (7.7.26015): starting
03:40:39 (644344): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 03:40:39] Arguments: --nthreads 4
[2026-03-14 03:40:39] Threads: 4
[2026-03-14 03:40:39] Checking for CVMFS
[2026-03-14 03:40:39] No cvmfs_config command found, will try listing directly
[2026-03-14 03:40:39] CVMFS is ok
[2026-03-14 03:40:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 03:40:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 03:40:39] Further information can be found at the LHC@home message board.
[2026-03-14 03:40:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 03:40:39] Checking for apptainer binary...
[2026-03-14 03:40:39] which: no apptainer in ((null))
[2026-03-14 03:40:39] apptainer is not installed, using version from CVMFS
[2026-03-14 03:40:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 03:40:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-03-14 03:40:39] apptainer works
[2026-03-14 03:40:39] Set ATHENA_PROC_NUMBER=4
[2026-03-14 03:40:39] Set ATHENA_CORE_NUMBER=4
[2026-03-14 03:40:39] Starting ATLAS job with PandaID=7045948860
[2026-03-14 03:40:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 06:39:25]  *** The last 200 lines of the pilot log: ***
[2026-03-14 06:39:25] 2026-03-14 05:38:36,978 | INFO     | job 7045948860 has finished - writing final server update
[2026-03-14 06:39:25] 2026-03-14 05:38:36,978 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3864300/.job.ad'
[2026-03-14 06:39:25] 2026-03-14 05:38:36,978 | INFO     | total number of processed events: 400 (read)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,003 | INFO     | using path: /var/lib/boinc/var/slot36/slots/7/PanDA_Pilot-7045948860/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,004 | INFO     | extracted standard info from prmon json
[2026-03-14 06:39:25] 2026-03-14 05:38:37,004 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 06:39:25] 2026-03-14 05:38:37,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 06:39:25] 2026-03-14 05:38:37,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 06:39:25] 2026-03-14 05:38:37,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 06:39:25] 2026-03-14 05:38:37,008 | INFO     | fitting pss+swap vs Time
[2026-03-14 06:39:25] 2026-03-14 05:38:37,008 | INFO     | sum of square deviations: 1661798600.0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,009 | INFO     | sum of deviations: 13045986857.000002
[2026-03-14 06:39:25] 2026-03-14 05:38:37,009 | INFO     | mean x: 1773461397.0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,009 | INFO     | mean y: 2306868.44
[2026-03-14 06:39:25] 2026-03-14 05:38:37,010 | INFO     | intersect: -13920291259.070074
[2026-03-14 06:39:25] 2026-03-14 05:38:37,010 | INFO     | chi2: 2.1634138307737505
[2026-03-14 06:39:25] 2026-03-14 05:38:37,010 | INFO     | sum of square deviations: 1523386702.5
[2026-03-14 06:39:25] 2026-03-14 05:38:37,011 | INFO     | sum of deviations: 23381816090.5
[2026-03-14 06:39:25] 2026-03-14 05:38:37,011 | INFO     | mean x: 1773461244.5
[2026-03-14 06:39:25] 2026-03-14 05:38:37,011 | INFO     | mean y: 2317974.7470588237
[2026-03-14 06:39:25] 2026-03-14 05:38:37,011 | INFO     | intersect: -27217786148.83364
[2026-03-14 06:39:25] 2026-03-14 05:38:37,012 | INFO     | chi2: 1.362525997702073
[2026-03-14 06:39:25] 2026-03-14 05:38:37,012 | INFO     | current chi2=1.362525997702073 (change=37.01963173570162 %)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,012 | INFO     | sum of square deviations: 1392881930.0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,013 | INFO     | sum of deviations: 22651195880.000004
[2026-03-14 06:39:25] 2026-03-14 05:38:37,013 | INFO     | mean x: 1773461092.0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,013 | INFO     | mean y: 2317120.721212121
[2026-03-14 06:39:25] 2026-03-14 05:38:37,013 | INFO     | intersect: -28837898058.501274
[2026-03-14 06:39:25] 2026-03-14 05:38:37,014 | INFO     | chi2: 1.3634006033457595
[2026-03-14 06:39:25] 2026-03-14 05:38:37,014 | INFO     | current chi2=1.3634006033457595 (change=-0.06419001510148184 %)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,014 | INFO     | right removable region: 164
[2026-03-14 06:39:25] 2026-03-14 05:38:37,014 | INFO     | sum of square deviations: 1523386702.5
[2026-03-14 06:39:25] 2026-03-14 05:38:37,015 | INFO     | sum of deviations: -9893057805.5
[2026-03-14 06:39:25] 2026-03-14 05:38:37,015 | INFO     | mean x: 1773461549.5
[2026-03-14 06:39:25] 2026-03-14 05:38:37,016 | INFO     | mean y: 2331786.7470588237
[2026-03-14 06:39:25] 2026-03-14 05:38:37,016 | INFO     | intersect: 11519405945.42418
[2026-03-14 06:39:25] 2026-03-14 05:38:37,016 | INFO     | chi2: 0.8299923480439363
[2026-03-14 06:39:25] 2026-03-14 05:38:37,016 | INFO     | current chi2=0.8299923480439363 (change=61.63506323951496 %)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,016 | INFO     | sum of square deviations: 1392881930.0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,017 | INFO     | sum of deviations: -10242042923.0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,017 | INFO     | mean x: 1773461702.0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,017 | INFO     | mean y: 2332170.1454545455
[2026-03-14 06:39:25] 2026-03-14 05:38:37,018 | INFO     | intersect: 13042827909.924803
[2026-03-14 06:39:25] 2026-03-14 05:38:37,018 | INFO     | chi2: 0.8268138716171239
[2026-03-14 06:39:25] 2026-03-14 05:38:37,018 | INFO     | current chi2=0.8268138716171239 (change=0.3829524976107483 %)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,018 | INFO     | left removable region: 20
[2026-03-14 06:39:25] 2026-03-14 05:38:37,018 | INFO     | sum of square deviations: 925859220.0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,019 | INFO     | sum of deviations: 1123823160.5000002
[2026-03-14 06:39:25] 2026-03-14 05:38:37,019 | INFO     | mean x: 1773461671.5
[2026-03-14 06:39:25] 2026-03-14 05:38:37,019 | INFO     | mean y: 2343210.909722222
[2026-03-14 06:39:25] 2026-03-14 05:38:37,019 | INFO     | intersect: -2150313756.4105825
[2026-03-14 06:39:25] 2026-03-14 05:38:37,020 | INFO     | chi2: 0.0014419854048915782
[2026-03-14 06:39:25] 2026-03-14 05:38:37,020 | INFO     | current memory leak: 1.21 B/s (using 144 data points, chi2=0.00)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,020 | INFO     | could have reported an average CPU frequency of 2705 MHz (9 samples)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,020 | INFO     | ..............................
[2026-03-14 06:39:25] 2026-03-14 05:38:37,020 | INFO     | . Timing measurements:
[2026-03-14 06:39:25] 2026-03-14 05:38:37,021 | INFO     | . get job = 0 s
[2026-03-14 06:39:25] 2026-03-14 05:38:37,021 | INFO     | . initial setup = 8 s
[2026-03-14 06:39:25] 2026-03-14 05:38:37,021 | INFO     | . payload setup = 9 s
[2026-03-14 06:39:25] 2026-03-14 05:38:37,021 | INFO     | . stage-in = 0 s
[2026-03-14 06:39:25] 2026-03-14 05:38:37,021 | INFO     | . payload execution = 10624 s
[2026-03-14 06:39:25] 2026-03-14 05:38:37,021 | INFO     | . stage-out = 0 s
[2026-03-14 06:39:25] 2026-03-14 05:38:37,021 | INFO     | . log creation = 0 s
[2026-03-14 06:39:25] 2026-03-14 05:38:37,021 | INFO     | ..............................
[2026-03-14 06:39:25] 2026-03-14 05:38:37,115 | INFO     | 
[2026-03-14 06:39:25] 2026-03-14 05:38:37,116 | INFO     | job summary report
[2026-03-14 06:39:25] 2026-03-14 05:38:37,116 | INFO     | --------------------------------------------------
[2026-03-14 06:39:25] 2026-03-14 05:38:37,116 | INFO     | PanDA job id: 7045948860
[2026-03-14 06:39:25] 2026-03-14 05:38:37,116 | INFO     | task id: 48958635
[2026-03-14 06:39:25] 2026-03-14 05:38:37,116 | INFO     | errors: (none)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,116 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 06:39:25] 2026-03-14 05:38:37,116 | INFO     | pilot state: finished 
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | transexitcode: 0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | exeerrorcode: 0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | exeerrordiag: 
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | exitcode: 0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | exitmsg: OK
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | cpuconsumptiontime: 40344 s
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | nevents: 400
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | neventsw: 0
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | pid: 653589
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | pgrp: 653589
[2026-03-14 06:39:25] 2026-03-14 05:38:37,117 | INFO     | corecount: 4
[2026-03-14 06:39:25] 2026-03-14 05:38:37,118 | INFO     | event service: False
[2026-03-14 06:39:25] 2026-03-14 05:38:37,118 | INFO     | sizes: {0: 2279764, 1: 2280225, 12: 2280225, 10637: 2309521, 10638: 2318541, 10642: 2318597, 10643: 2318983}
[2026-03-14 06:39:25] 2026-03-14 05:38:37,118 | INFO     | --------------------------------------------------
[2026-03-14 06:39:25] 2026-03-14 05:38:37,118 | INFO     | 
[2026-03-14 06:39:25] 2026-03-14 05:38:37,118 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/7
[2026-03-14 06:39:25] 2026-03-14 05:38:37,154 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,155 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,155 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,155 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,156 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,157 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 06:39:25] 2026-03-14 05:38:37,157 | INFO     | job 7045948860 has completed (purged errors)
[2026-03-14 06:39:25] 2026-03-14 05:38:37,157 | INFO     | overall cleanup function is called
[2026-03-14 06:39:25] 2026-03-14 05:38:38,166 | INFO     | --- collectZombieJob: --- 10, [653589]
[2026-03-14 06:39:25] 2026-03-14 05:38:38,167 | INFO     | zombie collector waiting for pid 653589
[2026-03-14 06:39:25] 2026-03-14 05:38:38,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 06:39:25] 2026-03-14 05:38:38,167 | INFO     | collected zombie processes
[2026-03-14 06:39:25] 2026-03-14 05:38:38,167 | INFO     | will attempt to kill all subprocesses of pid=653589
[2026-03-14 06:39:25] 2026-03-14 05:38:39,016 | INFO     | process IDs to be killed: [653589] (in reverse order)
[2026-03-14 06:39:25] 2026-03-14 05:38:39,357 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 06:39:25] 2026-03-14 05:38:39,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 06:39:25] 2026-03-14 05:38:39,387 | INFO     | did not find any defunct processes belonging to 653589
[2026-03-14 06:39:25] 2026-03-14 05:38:39,412 | INFO     | did not find any defunct processes belonging to 653589
[2026-03-14 06:39:25] 2026-03-14 05:38:39,412 | INFO     | ready for new job
[2026-03-14 06:39:25] 2026-03-14 05:38:39,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 06:39:25] 2026-03-14 05:38:39,415 | INFO     | **************************************
[2026-03-14 06:39:25] 2026-03-14 05:38:39,415 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 06:39:25] 2026-03-14 05:38:39,415 | INFO     | **************************************
[2026-03-14 06:39:25] 2026-03-14 05:38:39,415 | INFO     | 
[2026-03-14 06:39:25] 2026-03-14 05:38:39,423 | INFO     | architecture information:
[2026-03-14 06:39:25] 2026-03-14 05:38:39,424 | INFO     | executing command: cat /etc/os-release
[2026-03-14 06:39:25] 2026-03-14 05:38:39,451 | INFO     | cat /etc/os-release:
[2026-03-14 06:39:25] NAME="CentOS Linux"
[2026-03-14 06:39:25] VERSION="7 (Core)"
[2026-03-14 06:39:25] ID="centos"
[2026-03-14 06:39:25] ID_LIKE="rhel fedora"
[2026-03-14 06:39:25] VERSION_ID="7"
[2026-03-14 06:39:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 06:39:25] ANSI_COLOR="0;31"
[2026-03-14 06:39:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 06:39:25] HOME_URL="https://www.centos.org/"
[2026-03-14 06:39:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 06:39:25] 
[2026-03-14 06:39:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 06:39:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 06:39:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 06:39:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 06:39:25] 
[2026-03-14 06:39:25] 2026-03-14 05:38:39,452 | INFO     | **************************************
[2026-03-14 06:39:25] 2026-03-14 05:38:39,954 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/7
[2026-03-14 06:39:25] 2026-03-14 05:38:39,983 | INFO     | sufficient remaining disk space (61838721024 B)
[2026-03-14 06:39:25] 2026-03-14 05:38:39,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 06:39:25] 2026-03-14 05:38:39,984 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 06:39:25] 2026-03-14 05:38:39,984 | INFO     | update_server=False
[2026-03-14 06:39:25] 2026-03-14 05:38:39,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 06:39:25] 2026-03-14 05:38:39,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:39:25] 2026-03-14 05:38:39,985 | INFO     | aborting loop
[2026-03-14 06:39:25] 2026-03-14 05:38:40,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 06:39:25] 2026-03-14 05:38:40,667 | INFO     | all payload control threads have been joined
[2026-03-14 06:39:25] 2026-03-14 05:38:40,989 | INFO     | [job] retrieve thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:40,991 | INFO     | [job] job monitor thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:41,067 | INFO     | all data control threads have been joined
[2026-03-14 06:39:25] 2026-03-14 05:38:41,198 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:41,299 | INFO     | [data] copytool_in thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:41,316 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:41,370 | INFO     | all job control threads have been joined
[2026-03-14 06:39:25] 2026-03-14 05:38:41,456 | INFO     | [payload] failed_post thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:41,672 | INFO     | [payload] control thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:41,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 06:39:25] 2026-03-14 05:38:42,011 | INFO     | [payload] validate_post thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:42,072 | INFO     | [data] control thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:42,124 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:39:25] 2026-03-14 05:38:42,248 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:42,249 | INFO     | [job] validate thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:42,375 | INFO     | [job] control thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:42,385 | INFO     | [data] copytool_out thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:43,129 | INFO     | [job] queue monitor thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:45,784 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:38:50,440 | INFO     | job.realtimelogging is not enabled
[2026-03-14 06:39:25] 2026-03-14 05:38:51,445 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 06:39:25] 2026-03-14 05:39:09,371 | INFO     | PID=648389 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 06:39:25] 2026-03-14 05:39:09,371 | INFO     | .. there are 24 such processes running
[2026-03-14 06:39:25] 2026-03-14 05:39:09,372 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 06:39:25] 2026-03-14 05:39:09,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 06:39:25] 2026-03-14 05:39:09,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 06:39:25] 2026-03-14 05:39:19,236 | INFO     | [monitor] cgroup control has ended
[2026-03-14 06:39:25] 2026-03-14 05:39:20,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22788860933952)>', '<ExcThread(monitor, started 22788555396864)>']
[2026-03-14 06:39:25] 2026-03-14 05:39:21,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 06:39:25] 2026-03-14 05:39:21,432 | INFO     | [monitor] control thread has ended
[2026-03-14 06:39:25] 2026-03-14 05:39:25,466 | INFO     | all workflow threads have been joined
[2026-03-14 06:39:25] 2026-03-14 05:39:25,467 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 06:39:25] 2026-03-14 05:39:25,467 | INFO     | traces error code: 0
[2026-03-14 06:39:25] 2026-03-14 05:39:25,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 06:39:25] 2026-03-14 05:39:25,637 [wrapper] ==== pilot stdout END ====
[2026-03-14 06:39:25] 2026-03-14 05:39:25,641 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 06:39:25] 2026-03-14 05:39:25,645 [wrapper] pilotpid: 648389
[2026-03-14 06:39:25] 2026-03-14 05:39:25,649 [wrapper] Pilot exit status: 0
[2026-03-14 06:39:25] 2026-03-14 05:39:25,666 [wrapper] pandaids: 7045948860
[2026-03-14 06:39:25] 2026-03-14 05:39:25,868 [wrapper] cleanup supervisor_pilot 1030465 648390
[2026-03-14 06:39:25] 2026-03-14 05:39:25,874 [wrapper] Test setup, not cleaning
[2026-03-14 06:39:25] 2026-03-14 05:39:25,878 [wrapper] apfmon messages muted
[2026-03-14 06:39:25] 2026-03-14 05:39:25,882 [wrapper] ==== wrapper stdout END ====
[2026-03-14 06:39:25] 2026-03-14 05:39:25,886 [wrapper] ==== wrapper stderr END ====
[2026-03-14 06:39:25]  *** Error codes and diagnostics ***
[2026-03-14 06:39:25]     "exeErrorCode": 0,
[2026-03-14 06:39:25]     "exeErrorDiag": "",
[2026-03-14 06:39:25]     "pilotErrorCode": 0,
[2026-03-14 06:39:25]     "pilotErrorDiag": "",
[2026-03-14 06:39:25]  *** Listing of results directory ***
[2026-03-14 06:39:25] total 450564
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc    584627 Mar  8 08:59 pilot3.tar.gz
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc      5111 Mar  8 09:02 queuedata.json
[2026-03-14 06:39:25] -rwx------. 1 boinc boinc     36322 Mar  8 09:02 runpilot2-wrapper.sh
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc       100 Mar 14 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 06:39:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 03:40 run_atlas
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc       105 Mar 14 03:40 job.xml
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc      6619 Mar 14 03:40 init_data.xml
[2026-03-14 06:39:25] -rw-r--r--. 2 boinc boinc 267474743 Mar 14 03:40 EVNT.48958633._000063.pool.root.1
[2026-03-14 06:39:25] -rw-r--r--. 2 boinc boinc     15845 Mar 14 03:40 start_atlas.sh
[2026-03-14 06:39:25] drwxrwx--x. 2 boinc boinc      4096 Mar 14 03:40 shared
[2026-03-14 06:39:25] -rw-r--r--. 2 boinc boinc    597933 Mar 14 03:40 input.tar.gz
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc         0 Mar 14 03:40 boinc_lockfile
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc      2526 Mar 14 03:40 pandaJob.out
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc   1006013 Mar 14 03:40 agis_schedconf.cvmfs.json
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc   1511579 Mar 14 03:40 agis_ddmendpoints.agis.ALL.json
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc       443 Mar 14 03:41 workernode_map.json
[2026-03-14 06:39:25] drwx------. 5 boinc boinc      4096 Mar 14 03:41 pilot3
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc 186325205 Mar 14 06:37 HITS.48958635._001605.pool.root.1
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc       530 Mar 14 06:37 boinc_task_state.xml
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc      1027 Mar 14 06:38 memory_monitor_summary.json
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc    345013 Mar 14 06:38 log.48958635._001605.job.log.tgz.1
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc      6346 Mar 14 06:38 heartbeat.json
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc      8192 Mar 14 06:38 boinc_mmap_file
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc        28 Mar 14 06:38 wrapper_checkpoint.txt
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc        95 Mar 14 06:39 pilot_heartbeat.json
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc      4900 Mar 14 06:39 pilotlog.txt
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc   1475504 Mar 14 06:39 log.48958635._001605.job.log.1
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc       357 Mar 14 06:39 output.list
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc       620 Mar 14 06:39 runtime_log
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc   1832960 Mar 14 06:39 result.tar.gz
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc      9205 Mar 14 06:39 runtime_log.err
[2026-03-14 06:39:25] -rw-------. 1 boinc boinc       666 Mar 14 06:39 hvJKDmtGOJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiCWLDmFIUjbn.diag
[2026-03-14 06:39:25] -rw-r--r--. 1 boinc boinc     20874 Mar 14 06:39 stderr.txt
[2026-03-14 06:39:26] HITS file was successfully produced:
[2026-03-14 06:39:26] -rw-------. 1 boinc boinc 186325205 Mar 14 06:37 shared/HITS.pool.root.1
[2026-03-14 06:39:26]  *** Contents of shared directory: ***
[2026-03-14 06:39:26] total 445568
[2026-03-14 06:39:26] -rw-r--r--. 2 boinc boinc 267474743 Mar 14 03:40 ATLAS.root_0
[2026-03-14 06:39:26] -rw-r--r--. 2 boinc boinc     15845 Mar 14 03:40 start_atlas.sh
[2026-03-14 06:39:26] -rw-r--r--. 2 boinc boinc    597933 Mar 14 03:40 input.tar.gz
[2026-03-14 06:39:26] -rw-------. 1 boinc boinc 186325205 Mar 14 06:37 HITS.pool.root.1
[2026-03-14 06:39:26] -rw-------. 1 boinc boinc   1832960 Mar 14 06:39 result.tar.gz
06:39:27 (644344): run_atlas exited; CPU time 41028.853749
06:39:27 (644344): called boinc_finish(0)

</stderr_txt>
]]>

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