Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:58:50 (7111): wrapper (7.7.26015): starting
20:58:50 (7111): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 20:58:50] Arguments: --nthreads 8
[2026-03-08 20:58:50] Threads: 8
[2026-03-08 20:58:50] Checking for CVMFS
[2026-03-08 20:58:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 20:58:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 20:58:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 20:58:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 20:58:50] 2.11.2.0 27806 119368 133352 157051 1 110 19290844 25165825 43 130560 165 39309902 99.809 27600440 967 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-08 20:58:50] CVMFS is ok
[2026-03-08 20:58:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 20:58:50] Checking for apptainer binary...
[2026-03-08 20:58:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 20:58:50] Running /usr/bin/apptainer --version
[2026-03-08 20:58:50] apptainer version 1.3.2-1.el7
[2026-03-08 20:58:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 20:58:52] cg-vwn467.simple-grid.lan
[2026-03-08 20:58:52] apptainer works
[2026-03-08 20:58:52] Set ATHENA_PROC_NUMBER=8
[2026-03-08 20:58:52] Set ATHENA_CORE_NUMBER=8
[2026-03-08 20:58:52] Starting ATLAS job with PandaID=7045942211
[2026-03-08 20:58:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 02:47:58]  *** The last 200 lines of the pilot log: ***
[2026-03-09 02:47:58] 2026-03-09 01:47:11,477 | INFO     | total number of processed events: 400 (read)
[2026-03-09 02:47:58] 2026-03-09 01:47:11,479 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7045942211/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 02:47:58] 2026-03-09 01:47:11,479 | INFO     | extracted standard info from prmon json
[2026-03-09 02:47:58] 2026-03-09 01:47:11,479 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 02:47:58] 2026-03-09 01:47:11,480 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 02:47:58] 2026-03-09 01:47:11,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 02:47:58] 2026-03-09 01:47:11,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 02:47:58] 2026-03-09 01:47:11,486 | INFO     | fitting pss+swap vs Time
[2026-03-09 02:47:58] 2026-03-09 01:47:11,487 | INFO     | sum of square deviations: 12403750705.5
[2026-03-09 02:47:58] 2026-03-09 01:47:11,491 | INFO     | sum of deviations: 30783752968.000015
[2026-03-09 02:47:58] 2026-03-09 01:47:11,491 | INFO     | mean x: 1773010378.5
[2026-03-09 02:47:58] 2026-03-09 01:47:11,491 | INFO     | mean y: 2531611.8830409357
[2026-03-09 02:47:58] 2026-03-09 01:47:11,492 | INFO     | intersect: -4397743336.987279
[2026-03-09 02:47:58] 2026-03-09 01:47:11,492 | INFO     | chi2: 2.24864863135128
[2026-03-09 02:47:58] 2026-03-09 01:47:11,493 | INFO     | sum of square deviations: 11867638328.0
[2026-03-09 02:47:58] 2026-03-09 01:47:11,500 | INFO     | sum of deviations: 52993083208.99999
[2026-03-09 02:47:58] 2026-03-09 01:47:11,500 | INFO     | mean x: 1773010226.0
[2026-03-09 02:47:58] 2026-03-09 01:47:11,500 | INFO     | mean y: 2537851.3738872404
[2026-03-09 02:47:58] 2026-03-09 01:47:11,500 | INFO     | intersect: -7914562066.909524
[2026-03-09 02:47:58] 2026-03-09 01:47:11,501 | INFO     | chi2: 1.4763099151983248
[2026-03-09 02:47:58] 2026-03-09 01:47:11,501 | INFO     | current chi2=1.4763099151983248 (change=34.346794131586215 %)
[2026-03-09 02:47:58] 2026-03-09 01:47:11,501 | INFO     | sum of square deviations: 11347200663.0
[2026-03-09 02:47:58] 2026-03-09 01:47:11,505 | INFO     | sum of deviations: 51678739297.50001
[2026-03-09 02:47:58] 2026-03-09 01:47:11,505 | INFO     | mean x: 1773010073.5
[2026-03-09 02:47:58] 2026-03-09 01:47:11,505 | INFO     | mean y: 2537466.2198795183
[2026-03-09 02:47:58] 2026-03-09 01:47:11,505 | INFO     | intersect: -8072310955.119598
[2026-03-09 02:47:58] 2026-03-09 01:47:11,506 | INFO     | chi2: 1.4766711466616704
[2026-03-09 02:47:58] 2026-03-09 01:47:11,506 | INFO     | current chi2=1.4766711466616704 (change=-0.02446853872800345 %)
[2026-03-09 02:47:58] 2026-03-09 01:47:11,506 | INFO     | right removable region: 331
[2026-03-09 02:47:58] 2026-03-09 01:47:11,507 | INFO     | sum of square deviations: 11867638328.0
[2026-03-09 02:47:58] 2026-03-09 01:47:11,511 | INFO     | sum of deviations: -20738783355.0
[2026-03-09 02:47:58] 2026-03-09 01:47:11,511 | INFO     | mean x: 1773010531.0
[2026-03-09 02:47:58] 2026-03-09 01:47:11,511 | INFO     | mean y: 2546166.1038575666
[2026-03-09 02:47:58] 2026-03-09 01:47:11,511 | INFO     | intersect: 3100894824.2179785
[2026-03-09 02:47:58] 2026-03-09 01:47:11,512 | INFO     | chi2: 0.8632562827203949
[2026-03-09 02:47:58] 2026-03-09 01:47:11,512 | INFO     | current chi2=0.8632562827203949 (change=61.609996747173504 %)
[2026-03-09 02:47:58] 2026-03-09 01:47:11,512 | INFO     | sum of square deviations: 11347200663.0
[2026-03-09 02:47:58] 2026-03-09 01:47:11,521 | INFO     | sum of deviations: -20746545818.500008
[2026-03-09 02:47:58] 2026-03-09 01:47:11,521 | INFO     | mean x: 1773010683.5
[2026-03-09 02:47:58] 2026-03-09 01:47:11,522 | INFO     | mean y: 2546151.756024096
[2026-03-09 02:47:58] 2026-03-09 01:47:11,522 | INFO     | intersect: 3244213279.567066
[2026-03-09 02:47:58] 2026-03-09 01:47:11,522 | INFO     | chi2: 0.8462082686891365
[2026-03-09 02:47:58] 2026-03-09 01:47:11,522 | INFO     | current chi2=0.8462082686891365 (change=1.9748496909324227 %)
[2026-03-09 02:47:58] 2026-03-09 01:47:11,522 | INFO     | left removable region: 20
[2026-03-09 02:47:58] 2026-03-09 01:47:11,523 | INFO     | sum of square deviations: 9327281860.0
[2026-03-09 02:47:58] 2026-03-09 01:47:11,526 | INFO     | sum of deviations: 14253764042.999998
[2026-03-09 02:47:58] 2026-03-09 01:47:11,526 | INFO     | mean x: 1773010653.0
[2026-03-09 02:47:58] 2026-03-09 01:47:11,526 | INFO     | mean y: 2548283.5530546624
[2026-03-09 02:47:58] 2026-03-09 01:47:11,527 | INFO     | intersect: -2706930841.546242
[2026-03-09 02:47:58] 2026-03-09 01:47:11,527 | INFO     | chi2: 0.00286578661478777
[2026-03-09 02:47:58] 2026-03-09 01:47:11,527 | INFO     | current memory leak: 1.53 B/s (using 311 data points, chi2=0.00)
[2026-03-09 02:47:58] 2026-03-09 01:47:11,528 | INFO     | could have reported an average CPU frequency of 2250 MHz (15 samples)
[2026-03-09 02:47:58] 2026-03-09 01:47:11,528 | INFO     | ..............................
[2026-03-09 02:47:58] 2026-03-09 01:47:11,528 | INFO     | . Timing measurements:
[2026-03-09 02:47:58] 2026-03-09 01:47:11,528 | INFO     | . get job = 0 s
[2026-03-09 02:47:58] 2026-03-09 01:47:11,528 | INFO     | . initial setup = 7 s
[2026-03-09 02:47:58] 2026-03-09 01:47:11,529 | INFO     | . payload setup = 7 s
[2026-03-09 02:47:58] 2026-03-09 01:47:11,529 | INFO     | . stage-in = 0 s
[2026-03-09 02:47:58] 2026-03-09 01:47:11,529 | INFO     | . payload execution = 20848 s
[2026-03-09 02:47:58] 2026-03-09 01:47:11,529 | INFO     | . stage-out = 3 s
[2026-03-09 02:47:58] 2026-03-09 01:47:11,529 | INFO     | . log creation = 1 s
[2026-03-09 02:47:58] 2026-03-09 01:47:11,529 | INFO     | ..............................
[2026-03-09 02:47:58] 2026-03-09 01:47:12,091 | INFO     | 
[2026-03-09 02:47:58] 2026-03-09 01:47:12,091 | INFO     | job summary report
[2026-03-09 02:47:58] 2026-03-09 01:47:12,091 | INFO     | --------------------------------------------------
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | PanDA job id: 7045942211
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | task id: 48997968
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | errors: (none)
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | pilot state: finished 
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | transexitcode: 0
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | exeerrorcode: 0
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | exeerrordiag: 
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | exitcode: 0
[2026-03-09 02:47:58] 2026-03-09 01:47:12,092 | INFO     | exitmsg: OK
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | cpuconsumptiontime: 79384 s
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | nevents: 400
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | neventsw: 0
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | pid: 22625
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | pgrp: 22625
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | corecount: 8
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | event service: False
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | sizes: {0: 2279800, 1: 2280261, 11: 2280261, 20860: 2313834, 20865: 2322832, 20866: 2322888, 20868: 2323210}
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | --------------------------------------------------
[2026-03-09 02:47:58] 2026-03-09 01:47:12,093 | INFO     | 
[2026-03-09 02:47:58] 2026-03-09 01:47:12,094 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-09 02:47:58] 2026-03-09 01:47:12,650 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,651 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,651 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,651 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,651 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 02:47:58] 2026-03-09 01:47:12,652 | INFO     | job 7045942211 has completed (purged errors)
[2026-03-09 02:47:58] 2026-03-09 01:47:12,653 | INFO     | overall cleanup function is called
[2026-03-09 02:47:58] 2026-03-09 01:47:13,661 | INFO     | --- collectZombieJob: --- 10, [22625]
[2026-03-09 02:47:58] 2026-03-09 01:47:13,661 | INFO     | zombie collector waiting for pid 22625
[2026-03-09 02:47:58] 2026-03-09 01:47:13,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 02:47:58] 2026-03-09 01:47:13,662 | INFO     | collected zombie processes
[2026-03-09 02:47:58] 2026-03-09 01:47:13,662 | INFO     | will attempt to kill all subprocesses of pid=22625
[2026-03-09 02:47:58] 2026-03-09 01:47:13,743 | INFO     | process IDs to be killed: [22625] (in reverse order)
[2026-03-09 02:47:58] 2026-03-09 01:47:14,714 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 02:47:58] 2026-03-09 01:47:14,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 02:47:58] 2026-03-09 01:47:14,717 | INFO     | did not find any defunct processes belonging to 22625
[2026-03-09 02:47:58] 2026-03-09 01:47:14,718 | INFO     | did not find any defunct processes belonging to 22625
[2026-03-09 02:47:58] 2026-03-09 01:47:14,719 | INFO     | ready for new job
[2026-03-09 02:47:58] 2026-03-09 01:47:14,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 02:47:58] 2026-03-09 01:47:14,721 | INFO     | **************************************
[2026-03-09 02:47:58] 2026-03-09 01:47:14,721 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 02:47:58] 2026-03-09 01:47:14,721 | INFO     | **************************************
[2026-03-09 02:47:58] 2026-03-09 01:47:14,721 | INFO     | 
[2026-03-09 02:47:58] 2026-03-09 01:47:14,722 | INFO     | pilot is running in a VM
[2026-03-09 02:47:58] 2026-03-09 01:47:14,722 | INFO     | architecture information:
[2026-03-09 02:47:58] 2026-03-09 01:47:14,731 | INFO     | executing command: cat /etc/os-release
[2026-03-09 02:47:58] 2026-03-09 01:47:15,050 | INFO     | cat /etc/os-release:
[2026-03-09 02:47:58] NAME="CentOS Linux"
[2026-03-09 02:47:58] VERSION="7 (Core)"
[2026-03-09 02:47:58] ID="centos"
[2026-03-09 02:47:58] ID_LIKE="rhel fedora"
[2026-03-09 02:47:58] VERSION_ID="7"
[2026-03-09 02:47:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 02:47:58] ANSI_COLOR="0;31"
[2026-03-09 02:47:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 02:47:58] HOME_URL="https://www.centos.org/"
[2026-03-09 02:47:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 02:47:58] 
[2026-03-09 02:47:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 02:47:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 02:47:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 02:47:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 02:47:58] 
[2026-03-09 02:47:58] 2026-03-09 01:47:15,051 | INFO     | **************************************
[2026-03-09 02:47:58] 2026-03-09 01:47:15,554 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-09 02:47:58] 2026-03-09 01:47:15,835 | INFO     | sufficient remaining disk space (494540947456 B)
[2026-03-09 02:47:58] 2026-03-09 01:47:15,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 02:47:58] 2026-03-09 01:47:15,835 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 02:47:58] 2026-03-09 01:47:15,835 | INFO     | update_server=False
[2026-03-09 02:47:58] 2026-03-09 01:47:15,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 02:47:58] 2026-03-09 01:47:15,899 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 02:47:58] 2026-03-09 01:47:15,899 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 02:47:58] 2026-03-09 01:47:15,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 02:47:58] 2026-03-09 01:47:15,900 | INFO     | will abort loop
[2026-03-09 02:47:58] 2026-03-09 01:47:16,141 | INFO     | all data control threads have been joined
[2026-03-09 02:47:58] 2026-03-09 01:47:16,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 02:47:58] 2026-03-09 01:47:16,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 02:47:58] 2026-03-09 01:47:16,841 | INFO     | [job] retrieve thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:16,893 | INFO     | [data] copytool_in thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:16,905 | INFO     | [job] job monitor thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:16,977 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:17,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 02:47:58] 2026-03-09 01:47:17,133 | INFO     | all payload control threads have been joined
[2026-03-09 02:47:58] 2026-03-09 01:47:17,147 | INFO     | [data] control thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:17,317 | INFO     | all job control threads have been joined
[2026-03-09 02:47:58] 2026-03-09 01:47:17,340 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:17,360 | INFO     | [job] validate thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:17,697 | INFO     | [job] queue monitor thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:17,704 | INFO     | [payload] validate_post thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:18,139 | INFO     | [payload] control thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:18,157 | INFO     | [payload] failed_post thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:18,308 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:18,323 | INFO     | [job] control thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:18,331 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:19,023 | INFO     | [data] copytool_out thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:20,189 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 02:47:58] 2026-03-09 01:47:43,958 | INFO     | PID=13030 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-09 02:47:58] 2026-03-09 01:47:43,958 | INFO     | .. there are 2 such processes running
[2026-03-09 02:47:58] 2026-03-09 01:47:43,958 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 02:47:58] 2026-03-09 01:47:43,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 02:47:58] 2026-03-09 01:47:43,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 02:47:58] 2026-03-09 01:47:48,241 | INFO     | [monitor] cgroup control has ended
[2026-03-09 02:47:58] 2026-03-09 01:47:48,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075657914176)>', '<ExcThread(monitor, started 140074771535616)>']
[2026-03-09 02:47:58] 2026-03-09 01:47:48,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 02:47:58] 2026-03-09 01:47:48,988 | INFO     | [monitor] control thread has ended
[2026-03-09 02:47:58] 2026-03-09 01:47:53,942 | INFO     | all workflow threads have been joined
[2026-03-09 02:47:58] 2026-03-09 01:47:53,942 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 02:47:58] 2026-03-09 01:47:53,943 | INFO     | traces error code: 0
[2026-03-09 02:47:58] 2026-03-09 01:47:53,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 02:47:58] 2026-03-09 01:47:54,438 [wrapper] ==== pilot stdout END ====
[2026-03-09 02:47:58] 2026-03-09 01:47:54,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 02:47:58] 2026-03-09 01:47:54,650 [wrapper] pilotpid: 13030
[2026-03-09 02:47:58] 2026-03-09 01:47:54,744 [wrapper] Pilot exit status: 0
[2026-03-09 02:47:58] 2026-03-09 01:47:55,148 [wrapper] pandaids: 7045942211
[2026-03-09 02:47:58] 2026-03-09 01:47:55,982 [wrapper] cleanup supervisor_pilot  5950 13031
[2026-03-09 02:47:58] 2026-03-09 01:47:56,065 [wrapper] Test setup, not cleaning
[2026-03-09 02:47:58] 2026-03-09 01:47:56,177 [wrapper] apfmon messages muted
[2026-03-09 02:47:58] 2026-03-09 01:47:56,282 [wrapper] ==== wrapper stdout END ====
[2026-03-09 02:47:58] 2026-03-09 01:47:56,398 [wrapper] ==== wrapper stderr END ====
[2026-03-09 02:47:58]  *** Error codes and diagnostics ***
[2026-03-09 02:47:58]     "exeErrorCode": 0,
[2026-03-09 02:47:58]     "exeErrorDiag": "",
[2026-03-09 02:47:58]     "pilotErrorCode": 0,
[2026-03-09 02:47:58]     "pilotErrorDiag": "",
[2026-03-09 02:47:58]  *** Listing of results directory ***
[2026-03-09 02:47:58] total 646328
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc    584627 Mar  8 08:19 pilot3.tar.gz
[2026-03-09 02:47:58] -rwx------. 1 boinc boinc     36322 Mar  8 08:19 runpilot2-wrapper.sh
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc      5111 Mar  8 08:19 queuedata.json
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc       100 Mar  8 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 02:47:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 20:58 run_atlas
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc       105 Mar  8 20:58 job.xml
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc      6390 Mar  8 20:58 init_data.xml
[2026-03-09 02:47:58] -rw-r--r--. 2 boinc boinc 360693206 Mar  8 20:58 EVNT.48997965._000034.pool.root.1
[2026-03-09 02:47:58] -rw-r--r--. 2 boinc boinc     15845 Mar  8 20:58 start_atlas.sh
[2026-03-09 02:47:58] drwxrwx--x. 2 boinc boinc        68 Mar  8 20:58 shared
[2026-03-09 02:47:58] -rw-r--r--. 2 boinc boinc    597947 Mar  8 20:58 input.tar.gz
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc         0 Mar  8 20:58 boinc_lockfile
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc      2564 Mar  8 20:58 pandaJob.out
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc    999108 Mar  8 20:59 agis_schedconf.cvmfs.json
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc       413 Mar  8 20:59 workernode_map.json
[2026-03-09 02:47:58] drwx------. 5 boinc boinc      4096 Mar  8 20:59 pilot3
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc 290343023 Mar  9 02:45 HITS.48997968._000827.pool.root.1
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc       531 Mar  9 02:46 boinc_task_state.xml
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc      1016 Mar  9 02:47 memory_monitor_summary.json
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc   1511578 Mar  9 02:47 agis_ddmendpoints.agis.ALL.json
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc    537970 Mar  9 02:47 log.48997968._000827.job.log.tgz.1
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc      6306 Mar  9 02:47 heartbeat.json
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc        95 Mar  9 02:47 pilot_heartbeat.json
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc      8192 Mar  9 02:47 boinc_mmap_file
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc        28 Mar  9 02:47 wrapper_checkpoint.txt
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc      5066 Mar  9 02:47 pilotlog.txt
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc   2909444 Mar  9 02:47 log.48997968._000827.job.log.1
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc       357 Mar  9 02:47 output.list
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc       620 Mar  9 02:47 runtime_log
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc   3461120 Mar  9 02:47 result.tar.gz
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc      8816 Mar  9 02:47 runtime_log.err
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc       656 Mar  9 02:47 4KANDmMbNJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtUYLDmr9rWMo.diag
[2026-03-09 02:47:58] -rw-r--r--. 1 boinc boinc     20723 Mar  9 02:47 stderr.txt
[2026-03-09 02:47:58] HITS file was successfully produced:
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc 290343023 Mar  9 02:45 shared/HITS.pool.root.1
[2026-03-09 02:47:58]  *** Contents of shared directory: ***
[2026-03-09 02:47:58] total 639760
[2026-03-09 02:47:58] -rw-r--r--. 2 boinc boinc 360693206 Mar  8 20:58 ATLAS.root_0
[2026-03-09 02:47:58] -rw-r--r--. 2 boinc boinc     15845 Mar  8 20:58 start_atlas.sh
[2026-03-09 02:47:58] -rw-r--r--. 2 boinc boinc    597947 Mar  8 20:58 input.tar.gz
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc 290343023 Mar  9 02:45 HITS.pool.root.1
[2026-03-09 02:47:58] -rw-------. 1 boinc boinc   3461120 Mar  9 02:47 result.tar.gz
02:47:59 (7111): run_atlas exited; CPU time 79587.760744
02:47:59 (7111): called boinc_finish(0)

</stderr_txt>
]]>

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