Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
08:05:06 (1512986): wrapper (7.7.26015): starting
08:05:06 (1512986): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 08:05:06] Arguments: --nthreads 4
[2026-03-08 08:05:06] Threads: 4
[2026-03-08 08:05:06] Checking for CVMFS
[2026-03-08 08:05:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 08:05:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 08:05:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 08:05:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 08:05:07] 2.13.3.0 196114 3002 51168 157038 2 188 3583017 4096000 2748 130560 0 3502990 99.994 111254 1117 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-08 08:05:07] CVMFS is ok
[2026-03-08 08:05:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 08:05:07] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-08 08:05:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-08 08:05:07] Further information can be found at the LHC@home message board.
[2026-03-08 08:05:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 08:05:07] Checking for apptainer binary...
[2026-03-08 08:05:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 08:05:07] Running /usr/bin/apptainer --version
[2026-03-08 08:05:07] apptainer version 1.4.5
[2026-03-08 08:05:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 08:05:07] Taichi-Ubuntu
[2026-03-08 08:05:07] apptainer works
[2026-03-08 08:05:07] Set ATHENA_PROC_NUMBER=4
[2026-03-08 08:05:07] Set ATHENA_CORE_NUMBER=4
[2026-03-08 08:05:07] Starting ATLAS job with PandaID=7039432303
[2026-03-08 08:05:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 09:41:44]  *** The last 200 lines of the pilot log: ***
[2026-03-08 09:41:44]  is_altstaged=None
[2026-03-08 09:41:44]  is_tar=False
[2026-03-08 09:41:44]  lfn=log.48955010._013691.job.log.tgz.1
[2026-03-08 09:41:44]  mtime=0
[2026-03-08 09:41:44]  protocol_id=None
[2026-03-08 09:41:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 09:41:44]  replicas=None
[2026-03-08 09:41:44]  scope=mc23_13p6TeV
[2026-03-08 09:41:44]  status=None
[2026-03-08 09:41:44]  status_code=0
[2026-03-08 09:41:44]  storage_token=
[2026-03-08 09:41:44]  surl=/home/whitlerd/Desktop/BOINC/slots/10/PanDA_Pilot-7039432303/log.48955010._013691.job.log.tgz.1
[2026-03-08 09:41:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/e7/log.48955010._013691.job.log.tgz.1
[2026-03-08 09:41:44]  workdir=None
[2026-03-08 09:41:44] ]
[2026-03-08 09:41:44] 2026-03-08 13:41:09,839 | INFO     | transferring file log.48955010._013691.job.log.tgz.1 from /home/whitlerd/Desktop/BOINC/slots/10/PanDA_Pilot-7039432303/log.48955010._013691.job.log.tgz.1 to /home/
[2026-03-08 09:41:44] 2026-03-08 13:41:09,839 | INFO     | executing command: /usr/bin/env mv /home/whitlerd/Desktop/BOINC/slots/10/PanDA_Pilot-7039432303/log.48955010._013691.job.log.tgz.1 /home/whitlerd/Desktop/BOINC/slo
[2026-03-08 09:41:44] 2026-03-08 13:41:09,863 | INFO     | adding to output.list: log.48955010._013691.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/e7/log.48955010._013691.job.log.tg
[2026-03-08 09:41:44] 2026-03-08 13:41:09,864 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 09:41:44] 2026-03-08 13:41:09,864 | INFO     | summary of transferred files:
[2026-03-08 09:41:44] 2026-03-08 13:41:09,864 | INFO     |  -- lfn=log.48955010._013691.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 09:41:44] 2026-03-08 13:41:09,864 | INFO     | stage-out finished correctly
[2026-03-08 09:41:44] 2026-03-08 13:41:10,035 | INFO     | PID=1517247 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 09:41:44] 2026-03-08 13:41:10,035 | INFO     | .. there are 4 such processes running
[2026-03-08 09:41:44] 2026-03-08 13:41:10,082 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 09:41:44] 2026-03-08 13:41:11,036 | INFO     | time since job start (5745s) is within the limit (349056.0s)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,778 | INFO     | job 7039432303 has state=finished
[2026-03-08 09:41:44] 2026-03-08 13:41:12,778 | INFO     | preparing for final server update for job 7039432303 in state='finished'
[2026-03-08 09:41:44] 2026-03-08 13:41:12,778 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/10/PanDA_Pilot-7039432303/jobReport.json
[2026-03-08 09:41:44] 2026-03-08 13:41:12,781 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/10/workernode_map.json
[2026-03-08 09:41:44] 2026-03-08 13:41:12,781 | INFO     | this job has now completed (state=finished)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,781 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,781 | INFO     | log transfer has been attempted: DONE
[2026-03-08 09:41:44] 2026-03-08 13:41:12,781 | INFO     | job 7039432303 has finished - writing final server update
[2026-03-08 09:41:44] 2026-03-08 13:41:12,782 | INFO     | total number of processed events: 400 (read)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,790 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/10/PanDA_Pilot-7039432303/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,791 | INFO     | extracted standard info from prmon json
[2026-03-08 09:41:44] 2026-03-08 13:41:12,791 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 09:41:44] 2026-03-08 13:41:12,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 09:41:44] 2026-03-08 13:41:12,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 09:41:44] 2026-03-08 13:41:12,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 09:41:44] 2026-03-08 13:41:12,793 | INFO     | fitting pss+swap vs Time
[2026-03-08 09:41:44] 2026-03-08 13:41:12,793 | INFO     | sum of square deviations: 204163828.0
[2026-03-08 09:41:44] 2026-03-08 13:41:12,794 | INFO     | sum of deviations: -1440674027.0
[2026-03-08 09:41:44] 2026-03-08 13:41:12,794 | INFO     | mean x: 1772974476.0
[2026-03-08 09:41:44] 2026-03-08 13:41:12,794 | INFO     | mean y: 2329302.459770115
[2026-03-08 09:41:44] 2026-03-08 13:41:12,794 | INFO     | intersect: 12513254000.184065
[2026-03-08 09:41:44] 2026-03-08 13:41:12,794 | INFO     | chi2: 0.026662987622761886
[2026-03-08 09:41:44] 2026-03-08 13:41:12,795 | INFO     | current memory leak: -7.06 B/s (using 87 data points, chi2=0.03)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,795 | INFO     | could have reported an average CPU frequency of 3313 MHz (7 samples)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,795 | INFO     | ..............................
[2026-03-08 09:41:44] 2026-03-08 13:41:12,795 | INFO     | . Timing measurements:
[2026-03-08 09:41:44] 2026-03-08 13:41:12,795 | INFO     | . get job = 0 s
[2026-03-08 09:41:44] 2026-03-08 13:41:12,795 | INFO     | . initial setup = 7 s
[2026-03-08 09:41:44] 2026-03-08 13:41:12,795 | INFO     | . payload setup = 5 s
[2026-03-08 09:41:44] 2026-03-08 13:41:12,795 | INFO     | . stage-in = 0 s
[2026-03-08 09:41:44] 2026-03-08 13:41:12,795 | INFO     | . payload execution = 5722 s
[2026-03-08 09:41:44] 2026-03-08 13:41:12,796 | INFO     | . stage-out = 0 s
[2026-03-08 09:41:44] 2026-03-08 13:41:12,796 | INFO     | . log creation = 0 s
[2026-03-08 09:41:44] 2026-03-08 13:41:12,796 | INFO     | ..............................
[2026-03-08 09:41:44] 2026-03-08 13:41:12,884 | INFO     | 
[2026-03-08 09:41:44] 2026-03-08 13:41:12,884 | INFO     | job summary report
[2026-03-08 09:41:44] 2026-03-08 13:41:12,884 | INFO     | --------------------------------------------------
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | PanDA job id: 7039432303
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | task id: 48955010
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | errors: (none)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | pilot state: finished 
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | transexitcode: 0
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | exeerrorcode: 0
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | exeerrordiag: 
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | exitcode: 0
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | exitmsg: OK
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | cpuconsumptiontime: 22249 s
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | nevents: 400
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | neventsw: 0
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | pid: 1521877
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | pgrp: 1521877
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | corecount: 4
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | event service: False
[2026-03-08 09:41:44] 2026-03-08 13:41:12,885 | INFO     | sizes: {0: 2294664, 1: 2295797, 12: 2295797, 5731: 2322545, 5732: 2331629, 5735: 2331767}
[2026-03-08 09:41:44] 2026-03-08 13:41:12,886 | INFO     | --------------------------------------------------
[2026-03-08 09:41:44] 2026-03-08 13:41:12,886 | INFO     | 
[2026-03-08 09:41:44] 2026-03-08 13:41:12,886 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/10
[2026-03-08 09:41:44] 2026-03-08 13:41:12,905 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,907 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,907 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 09:41:44] 2026-03-08 13:41:12,907 | INFO     | job 7039432303 has completed (purged errors)
[2026-03-08 09:41:44] 2026-03-08 13:41:12,907 | INFO     | overall cleanup function is called
[2026-03-08 09:41:44] 2026-03-08 13:41:13,915 | INFO     | --- collectZombieJob: --- 10, [1521877]
[2026-03-08 09:41:44] 2026-03-08 13:41:13,916 | INFO     | zombie collector waiting for pid 1521877
[2026-03-08 09:41:44] 2026-03-08 13:41:13,916 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 09:41:44] 2026-03-08 13:41:13,916 | INFO     | collected zombie processes
[2026-03-08 09:41:44] 2026-03-08 13:41:13,916 | INFO     | will attempt to kill all subprocesses of pid=1521877
[2026-03-08 09:41:44] 2026-03-08 13:41:14,189 | INFO     | process IDs to be killed: [1521877] (in reverse order)
[2026-03-08 09:41:44] 2026-03-08 13:41:14,260 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 09:41:44] 2026-03-08 13:41:14,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 09:41:44] 2026-03-08 13:41:14,278 | INFO     | did not find any defunct processes belonging to 1521877
[2026-03-08 09:41:44] 2026-03-08 13:41:14,288 | INFO     | did not find any defunct processes belonging to 1521877
[2026-03-08 09:41:44] 2026-03-08 13:41:14,289 | INFO     | ready for new job
[2026-03-08 09:41:44] 2026-03-08 13:41:14,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 09:41:44] 2026-03-08 13:41:14,290 | INFO     | **************************************
[2026-03-08 09:41:44] 2026-03-08 13:41:14,291 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 09:41:44] 2026-03-08 13:41:14,291 | INFO     | **************************************
[2026-03-08 09:41:44] 2026-03-08 13:41:14,291 | INFO     | 
[2026-03-08 09:41:44] 2026-03-08 13:41:14,293 | INFO     | architecture information:
[2026-03-08 09:41:44] 2026-03-08 13:41:14,294 | INFO     | executing command: cat /etc/os-release
[2026-03-08 09:41:44] 2026-03-08 13:41:14,314 | INFO     | cat /etc/os-release:
[2026-03-08 09:41:44] NAME="CentOS Linux"
[2026-03-08 09:41:44] VERSION="7 (Core)"
[2026-03-08 09:41:44] ID="centos"
[2026-03-08 09:41:44] ID_LIKE="rhel fedora"
[2026-03-08 09:41:44] VERSION_ID="7"
[2026-03-08 09:41:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 09:41:44] ANSI_COLOR="0;31"
[2026-03-08 09:41:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 09:41:44] HOME_URL="https://www.centos.org/"
[2026-03-08 09:41:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 09:41:44] 
[2026-03-08 09:41:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 09:41:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 09:41:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 09:41:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 09:41:44] 
[2026-03-08 09:41:44] 2026-03-08 13:41:14,315 | INFO     | **************************************
[2026-03-08 09:41:44] 2026-03-08 13:41:14,350 | WARNING  | process 1521877 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 09:41:44] 2026-03-08 13:41:14,476 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/10/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 09:41:44] 2026-03-08 13:41:14,654 | INFO     | number of running child processes to parent process 1521877: 1
[2026-03-08 09:41:44] 2026-03-08 13:41:14,654 | INFO     | maximum number of monitored processes: 6
[2026-03-08 09:41:44] 2026-03-08 13:41:14,654 | INFO     | aborting job monitoring since job object (job id=7039432303) has expired
[2026-03-08 09:41:44] 2026-03-08 13:41:14,818 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/10
[2026-03-08 09:41:44] 2026-03-08 13:41:14,840 | INFO     | sufficient remaining disk space (393295691776 B)
[2026-03-08 09:41:44] 2026-03-08 13:41:14,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 09:41:44] 2026-03-08 13:41:14,841 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 09:41:44] 2026-03-08 13:41:14,841 | INFO     | update_server=False
[2026-03-08 09:41:44] 2026-03-08 13:41:14,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 09:41:44] 2026-03-08 13:41:14,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:41:44] 2026-03-08 13:41:14,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:41:44] 2026-03-08 13:41:14,841 | INFO     | will abort loop
[2026-03-08 09:41:44] 2026-03-08 13:41:15,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 09:41:44] 2026-03-08 13:41:15,601 | INFO     | all data control threads have been joined
[2026-03-08 09:41:44] 2026-03-08 13:41:15,674 | INFO     | all payload control threads have been joined
[2026-03-08 09:41:44] 2026-03-08 13:41:15,775 | INFO     | all job control threads have been joined
[2026-03-08 09:41:44] 2026-03-08 13:41:15,846 | INFO     | [job] retrieve thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:15,847 | INFO     | [job] queue monitor thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:15,847 | INFO     | [job] job monitor thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:15,879 | INFO     | [payload] failed_post thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:16,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 09:41:44] 2026-03-08 13:41:16,240 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:16,441 | INFO     | [job] validate thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:16,520 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:16,606 | INFO     | [data] control thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:16,650 | INFO     | [payload] validate_post thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:16,679 | INFO     | [payload] control thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:16,742 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:16,780 | INFO     | [job] control thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:16,984 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:17,334 | INFO     | [data] copytool_in thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:17,456 | INFO     | [data] copytool_out thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:20,156 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 09:41:44] 2026-03-08 13:41:34,984 | INFO     | [monitor] cgroup control has ended
[2026-03-08 09:41:44] 2026-03-08 13:41:35,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134335942104896)>', '<ExcThread(monitor, started 134335596308224)>']
[2026-03-08 09:41:44] 2026-03-08 13:41:40,976 | INFO     | all workflow threads have been joined
[2026-03-08 09:41:44] 2026-03-08 13:41:40,977 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 09:41:44] 2026-03-08 13:41:40,977 | INFO     | traces error code: 0
[2026-03-08 09:41:44] 2026-03-08 13:41:40,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 09:41:44] 2026-03-08 13:41:44,377 | INFO     | PID=1517247 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 09:41:44] 2026-03-08 13:41:44,377 | INFO     | .. there are 4 such processes running
[2026-03-08 09:41:44] 2026-03-08 13:41:44,377 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 09:41:44] 2026-03-08 13:41:44,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 09:41:44] 2026-03-08 13:41:44,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 09:41:44] 2026-03-08 13:41:44,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 09:41:44] 2026-03-08 13:41:44,377 | INFO     | [monitor] control thread has ended
[2026-03-08 09:41:44] 2026-03-08 13:41:44,520 [wrapper] ==== pilot stdout END ====
[2026-03-08 09:41:44] 2026-03-08 13:41:44,524 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 09:41:44] 2026-03-08 13:41:44,527 [wrapper] pilotpid: 1517247
[2026-03-08 09:41:44] 2026-03-08 13:41:44,529 [wrapper] Pilot exit status: 0
[2026-03-08 09:41:44] 2026-03-08 13:41:44,540 [wrapper] pandaids: 7039432303
[2026-03-08 09:41:44] 2026-03-08 13:41:44,579 [wrapper] cleanup supervisor_pilot 1557809 1517248
[2026-03-08 09:41:44] 2026-03-08 13:41:44,583 [wrapper] Test setup, not cleaning
[2026-03-08 09:41:44] 2026-03-08 13:41:44,587 [wrapper] apfmon messages muted
[2026-03-08 09:41:44] 2026-03-08 13:41:44,589 [wrapper] ==== wrapper stdout END ====
[2026-03-08 09:41:44] 2026-03-08 13:41:44,592 [wrapper] ==== wrapper stderr END ====
[2026-03-08 09:41:44]  *** Error codes and diagnostics ***
[2026-03-08 09:41:44]     "exeErrorCode": 0,
[2026-03-08 09:41:44]     "exeErrorDiag": "",
[2026-03-08 09:41:44]     "pilotErrorCode": 0,
[2026-03-08 09:41:44]     "pilotErrorDiag": "",
[2026-03-08 09:41:44]  *** Listing of results directory ***
[2026-03-08 09:41:44] total 608768
[2026-03-08 09:41:44] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 21:20 pilot3.tar.gz
[2026-03-08 09:41:44] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 21:21 runpilot2-wrapper.sh
[2026-03-08 09:41:44] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 21:21 queuedata.json
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  8 08:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 09:41:44] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  8 08:05 run_atlas
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  8 08:05 job.xml
[2026-03-08 09:41:44] -rw-r--r-- 2 whitlerd whitlerd 437835544 Mar  8 08:05 EVNT.46701403._001274.pool.root.1
[2026-03-08 09:41:44] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  8 08:05 start_atlas.sh
[2026-03-08 09:41:44] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  8 08:05 shared
[2026-03-08 09:41:44] -rw-r--r-- 2 whitlerd whitlerd    597953 Mar  8 08:05 input.tar.gz
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd      9344 Mar  8 08:05 init_data.xml
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  8 08:05 boinc_setup_complete
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  8 08:05 boinc_lockfile
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd      2563 Mar  8 08:05 pandaJob.out
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd    999177 Mar  8 08:05 agis_schedconf.cvmfs.json
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd   1521291 Mar  8 08:05 agis_ddmendpoints.agis.ALL.json
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd       439 Mar  8 08:05 workernode_map.json
[2026-03-08 09:41:44] drwx------ 5 whitlerd whitlerd      4096 Mar  8 08:05 pilot3
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  8 09:40 boinc_task_state.xml
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd 179299315 Mar  8 09:40 HITS.48955010._013691.pool.root.1
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd        95 Mar  8 09:40 pilot_heartbeat.json
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd      1034 Mar  8 09:41 memory_monitor_summary.json
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd    304251 Mar  8 09:41 log.48955010._013691.job.log.tgz.1
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd      6348 Mar  8 09:41 heartbeat.json
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  8 09:41 wrapper_checkpoint.txt
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  8 09:41 boinc_mmap_file
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd       822 Mar  8 09:41 pilotlog.txt
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd    848224 Mar  8 09:41 log.48955010._013691.job.log.1
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd       357 Mar  8 09:41 output.list
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  8 09:41 runtime_log
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd   1167360 Mar  8 09:41 result.tar.gz
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  8 09:41 runtime_log.err
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd       649 Mar  8 09:41 J0QLDmCxIJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmotXLDmQQRs9n.diag
[2026-03-08 09:41:44] -rw-rw-r-- 1 whitlerd whitlerd     21735 Mar  8 09:41 stderr.txt
[2026-03-08 09:41:44] HITS file was successfully produced:
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd 179299315 Mar  8 09:40 shared/HITS.pool.root.1
[2026-03-08 09:41:44]  *** Contents of shared directory: ***
[2026-03-08 09:41:44] total 604424
[2026-03-08 09:41:44] -rw-r--r-- 2 whitlerd whitlerd 437835544 Mar  8 08:05 ATLAS.root_0
[2026-03-08 09:41:44] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  8 08:05 start_atlas.sh
[2026-03-08 09:41:44] -rw-r--r-- 2 whitlerd whitlerd    597953 Mar  8 08:05 input.tar.gz
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd 179299315 Mar  8 09:40 HITS.pool.root.1
[2026-03-08 09:41:44] -rw------- 1 whitlerd whitlerd   1167360 Mar  8 09:41 result.tar.gz
09:41:46 (1512986): run_atlas exited; CPU time 22340.419649
09:41:46 (1512986): called boinc_finish(0)

</stderr_txt>
]]>

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