Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:57:07 (2120898): wrapper (7.7.26015): starting
13:57:07 (2120898): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 13:57:07] Arguments: --nthreads 4
[2026-03-09 13:57:07] Threads: 4
[2026-03-09 13:57:07] Checking for CVMFS
[2026-03-09 13:57:07] No cvmfs_config command found, will try listing directly
[2026-03-09 13:57:07] CVMFS is ok
[2026-03-09 13:57:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 13:57:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 13:57:07] Further information can be found at the LHC@home message board.
[2026-03-09 13:57:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 13:57:07] Checking for apptainer binary...
[2026-03-09 13:57:07] which: no apptainer in ((null))
[2026-03-09 13:57:07] apptainer is not installed, using version from CVMFS
[2026-03-09 13:57:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 13:57:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot192/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-09 13:57:07] apptainer works
[2026-03-09 13:57:07] Set ATHENA_PROC_NUMBER=4
[2026-03-09 13:57:07] Set ATHENA_CORE_NUMBER=4
[2026-03-09 13:57:07] Starting ATLAS job with PandaID=7045939706
[2026-03-09 13:57:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot192/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 15:41:51]  *** The last 200 lines of the pilot log: ***
[2026-03-09 15:41:51] 2026-03-09 14:41:08,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 15:41:51] 2026-03-09 14:41:08,658 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 15:41:51] 2026-03-09 14:41:08,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 15:41:51] 2026-03-09 14:41:08,660 | INFO     | fitting pss+swap vs Time
[2026-03-09 15:41:51] 2026-03-09 14:41:08,660 | INFO     | sum of square deviations: 329031285.5
[2026-03-09 15:41:51] 2026-03-09 14:41:08,660 | INFO     | sum of deviations: 4493593121.000001
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | mean x: 1773064165.5
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | mean y: 2282739.6274509802
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | intersect: -24212523840.467213
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | chi2: 1.9774949952784455
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | sum of square deviations: 282974608.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | sum of deviations: 10583126741.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | mean x: 1773064013.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | mean y: 2302035.649484536
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | intersect: -66309517608.20023
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | chi2: 1.1145031856167853
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | current chi2=1.1145031856167853 (change=43.640657079900464 %)
[2026-03-09 15:41:51] 2026-03-09 14:41:08,661 | INFO     | sum of square deviations: 241429643.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | sum of deviations: 9940601327.500002
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | mean x: 1773063860.5
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | mean y: 2299675.032608696
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | intersect: -73001664322.16626
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | chi2: 1.1165354650464134
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | current chi2=1.1165354650464134 (change=-0.1823484630511341 %)
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | right removable region: 91
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | sum of square deviations: 282974608.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | sum of deviations: -5333391223.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | mean x: 1773064318.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | mean y: 2314287.4226804124
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | intersect: 33420315069.44225
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | chi2: 0.8993713310052683
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | current chi2=0.8993713310052683 (change=54.519665882712864 %)
[2026-03-09 15:41:51] 2026-03-09 14:41:08,662 | INFO     | sum of square deviations: 241429643.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | sum of deviations: -5141583250.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | mean x: 1773064470.5
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | mean y: 2313572.065217391
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | intersect: 37762211111.62675
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | chi2: 0.9009531826933237
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | current chi2=0.9009531826933237 (change=-0.17588415746889 %)
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | left removable region: 20
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | sum of square deviations: 110960220.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | sum of deviations: 555573970.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | mean x: 1773064440.0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | mean y: 2336942.028169014
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | intersect: -8875335164.215193
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | chi2: 7.485572809352464e-05
[2026-03-09 15:41:51] 2026-03-09 14:41:08,663 | INFO     | current memory leak: 5.01 B/s (using 71 data points, chi2=0.00)
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | could have reported an average CPU frequency of 3572 MHz (7 samples)
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | ..............................
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | . Timing measurements:
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | . get job = 0 s
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | . initial setup = 11 s
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | . payload setup = 10 s
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | . stage-in = 0 s
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | . payload execution = 6187 s
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | . stage-out = 0 s
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | . log creation = 0 s
[2026-03-09 15:41:51] 2026-03-09 14:41:08,664 | INFO     | ..............................
[2026-03-09 15:41:51] 2026-03-09 14:41:08,719 | INFO     | 
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | job summary report
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | --------------------------------------------------
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | PanDA job id: 7045939706
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | task id: 48966988
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | errors: (none)
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | pilot state: finished 
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | transexitcode: 0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | exeerrorcode: 0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | exeerrordiag: 
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | exitcode: 0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | exitmsg: OK
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | cpuconsumptiontime: 23321 s
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | nevents: 400
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | neventsw: 0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | pid: 2143441
[2026-03-09 15:41:51] 2026-03-09 14:41:08,720 | INFO     | pgrp: 2143441
[2026-03-09 15:41:51] 2026-03-09 14:41:08,721 | INFO     | corecount: 4
[2026-03-09 15:41:51] 2026-03-09 14:41:08,721 | INFO     | event service: False
[2026-03-09 15:41:51] 2026-03-09 14:41:08,721 | INFO     | sizes: {0: 2280283, 11: 2280283, 6202: 2316091, 6203: 2316285}
[2026-03-09 15:41:51] 2026-03-09 14:41:08,721 | INFO     | --------------------------------------------------
[2026-03-09 15:41:51] 2026-03-09 14:41:08,721 | INFO     | 
[2026-03-09 15:41:51] 2026-03-09 14:41:08,721 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot192/slots/0
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 15:41:51] 2026-03-09 14:41:08,736 | INFO     | job 7045939706 has completed (purged errors)
[2026-03-09 15:41:51] 2026-03-09 14:41:08,737 | INFO     | overall cleanup function is called
[2026-03-09 15:41:51] 2026-03-09 14:41:09,744 | INFO     | --- collectZombieJob: --- 10, [2143441]
[2026-03-09 15:41:51] 2026-03-09 14:41:09,744 | INFO     | zombie collector waiting for pid 2143441
[2026-03-09 15:41:51] 2026-03-09 14:41:09,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 15:41:51] 2026-03-09 14:41:09,744 | INFO     | collected zombie processes
[2026-03-09 15:41:51] 2026-03-09 14:41:09,744 | INFO     | will attempt to kill all subprocesses of pid=2143441
[2026-03-09 15:41:51] 2026-03-09 14:41:10,180 | INFO     | process IDs to be killed: [2143441] (in reverse order)
[2026-03-09 15:41:51] 2026-03-09 14:41:10,411 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 15:41:51] 2026-03-09 14:41:10,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 15:41:51] 2026-03-09 14:41:10,437 | INFO     | did not find any defunct processes belonging to 2143441
[2026-03-09 15:41:51] 2026-03-09 14:41:10,460 | INFO     | did not find any defunct processes belonging to 2143441
[2026-03-09 15:41:51] 2026-03-09 14:41:10,461 | INFO     | ready for new job
[2026-03-09 15:41:51] 2026-03-09 14:41:10,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 15:41:51] 2026-03-09 14:41:10,462 | INFO     | **************************************
[2026-03-09 15:41:51] 2026-03-09 14:41:10,462 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 15:41:51] 2026-03-09 14:41:10,462 | INFO     | **************************************
[2026-03-09 15:41:51] 2026-03-09 14:41:10,462 | INFO     | 
[2026-03-09 15:41:51] 2026-03-09 14:41:10,468 | INFO     | architecture information:
[2026-03-09 15:41:51] 2026-03-09 14:41:10,468 | INFO     | executing command: cat /etc/os-release
[2026-03-09 15:41:51] 2026-03-09 14:41:10,480 | INFO     | cat /etc/os-release:
[2026-03-09 15:41:51] NAME="CentOS Linux"
[2026-03-09 15:41:51] VERSION="7 (Core)"
[2026-03-09 15:41:51] ID="centos"
[2026-03-09 15:41:51] ID_LIKE="rhel fedora"
[2026-03-09 15:41:51] VERSION_ID="7"
[2026-03-09 15:41:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 15:41:51] ANSI_COLOR="0;31"
[2026-03-09 15:41:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 15:41:51] HOME_URL="https://www.centos.org/"
[2026-03-09 15:41:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 15:41:51] 
[2026-03-09 15:41:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 15:41:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 15:41:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 15:41:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 15:41:51] 
[2026-03-09 15:41:51] 2026-03-09 14:41:10,481 | INFO     | **************************************
[2026-03-09 15:41:51] 2026-03-09 14:41:10,983 | INFO     | executing command: df -mP /var/lib/boinc/var/slot192/slots/0
[2026-03-09 15:41:51] 2026-03-09 14:41:10,998 | INFO     | sufficient remaining disk space (20199768064 B)
[2026-03-09 15:41:51] 2026-03-09 14:41:10,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 15:41:51] 2026-03-09 14:41:10,998 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 15:41:51] 2026-03-09 14:41:10,998 | INFO     | update_server=False
[2026-03-09 15:41:51] 2026-03-09 14:41:10,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 15:41:51] 2026-03-09 14:41:10,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 15:41:51] 2026-03-09 14:41:11,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 15:41:51] 2026-03-09 14:41:11,631 | INFO     | all data control threads have been joined
[2026-03-09 15:41:51] 2026-03-09 14:41:11,818 | INFO     | all payload control threads have been joined
[2026-03-09 15:41:51] 2026-03-09 14:41:12,003 | INFO     | [job] retrieve thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:12,021 | INFO     | all job control threads have been joined
[2026-03-09 15:41:51] 2026-03-09 14:41:12,112 | WARNING  | process 2143441 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 15:41:51] 2026-03-09 14:41:12,341 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:12,407 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:12,412 | INFO     | using path: /var/lib/boinc/var/slot192/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 15:41:51] 2026-03-09 14:41:12,636 | INFO     | [data] control thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:12,754 | INFO     | [payload] validate_post thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:12,824 | INFO     | [payload] control thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:12,885 | INFO     | number of running child processes to parent process 2143441: 1
[2026-03-09 15:41:51] 2026-03-09 14:41:12,885 | INFO     | maximum number of monitored processes: 6
[2026-03-09 15:41:51] 2026-03-09 14:41:12,885 | INFO     | aborting job monitoring since job object (job id=7045939706) has expired
[2026-03-09 15:41:51] 2026-03-09 14:41:12,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:41:51] 2026-03-09 14:41:12,885 | INFO     | will abort loop
[2026-03-09 15:41:51] 2026-03-09 14:41:12,942 | INFO     | [payload] failed_post thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:13,008 | INFO     | [data] copytool_out thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:13,028 | INFO     | [job] control thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:13,379 | INFO     | [job] validate thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:13,400 | INFO     | [data] copytool_in thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:13,504 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:13,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:41:51] 2026-03-09 14:41:13,891 | INFO     | [job] job monitor thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:14,735 | INFO     | [job] queue monitor thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:15,004 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:21,101 | INFO     | job.realtimelogging is not enabled
[2026-03-09 15:41:51] 2026-03-09 14:41:22,105 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 15:41:51] 2026-03-09 14:41:40,060 | INFO     | 6227s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-09 15:41:51] 2026-03-09 14:41:41,596 | INFO     | PID=2131110 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 15:41:51] 2026-03-09 14:41:41,596 | INFO     | .. there are 57 such processes running
[2026-03-09 15:41:51] 2026-03-09 14:41:41,597 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 15:41:51] 2026-03-09 14:41:41,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 15:41:51] 2026-03-09 14:41:41,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 15:41:51] 2026-03-09 14:41:44,115 | INFO     | [monitor] cgroup control has ended
[2026-03-09 15:41:51] 2026-03-09 14:41:46,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22418629773120)>', '<ExcThread(monitor, started 22418315794176)>']
[2026-03-09 15:41:51] 2026-03-09 14:41:46,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 15:41:51] 2026-03-09 14:41:46,623 | INFO     | [monitor] control thread has ended
[2026-03-09 15:41:51] 2026-03-09 14:41:51,099 | INFO     | all workflow threads have been joined
[2026-03-09 15:41:51] 2026-03-09 14:41:51,100 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 15:41:51] 2026-03-09 14:41:51,100 | INFO     | traces error code: 0
[2026-03-09 15:41:51] 2026-03-09 14:41:51,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 15:41:51] 2026-03-09 14:41:51,221 [wrapper] ==== pilot stdout END ====
[2026-03-09 15:41:51] 2026-03-09 14:41:51,227 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 15:41:51] 2026-03-09 14:41:51,229 [wrapper] pilotpid: 2131110
[2026-03-09 15:41:51] 2026-03-09 14:41:51,234 [wrapper] Pilot exit status: 0
[2026-03-09 15:41:51] 2026-03-09 14:41:51,252 [wrapper] pandaids: 7045939706
[2026-03-09 15:41:51] 2026-03-09 14:41:51,372 [wrapper] cleanup supervisor_pilot 3077321 2131111
[2026-03-09 15:41:51] 2026-03-09 14:41:51,375 [wrapper] Test setup, not cleaning
[2026-03-09 15:41:51] 2026-03-09 14:41:51,377 [wrapper] apfmon messages muted
[2026-03-09 15:41:51] 2026-03-09 14:41:51,380 [wrapper] ==== wrapper stdout END ====
[2026-03-09 15:41:51] 2026-03-09 14:41:51,383 [wrapper] ==== wrapper stderr END ====
[2026-03-09 15:41:51]  *** Error codes and diagnostics ***
[2026-03-09 15:41:51]     "exeErrorCode": 0,
[2026-03-09 15:41:51]     "exeErrorDiag": "",
[2026-03-09 15:41:51]     "pilotErrorCode": 0,
[2026-03-09 15:41:51]     "pilotErrorDiag": "",
[2026-03-09 15:41:51]  *** Listing of results directory ***
[2026-03-09 15:41:51] total 402156
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc    584627 Mar  8 06:46 pilot3.tar.gz
[2026-03-09 15:41:51] -rwx------. 1 boinc boinc     36322 Mar  8 06:46 runpilot2-wrapper.sh
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc      5111 Mar  8 06:46 queuedata.json
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc       100 Mar  9 13:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 15:41:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 13:57 run_atlas
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc       105 Mar  9 13:57 job.xml
[2026-03-09 15:41:51] -rw-r--r--. 2 boinc boinc    597970 Mar  9 13:57 input.tar.gz
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc      6708 Mar  9 13:57 init_data.xml
[2026-03-09 15:41:51] -rw-r--r--. 2 boinc boinc 212381600 Mar  9 13:57 EVNT.48966985._000626.pool.root.1
[2026-03-09 15:41:51] -rw-r--r--. 2 boinc boinc     15845 Mar  9 13:57 start_atlas.sh
[2026-03-09 15:41:51] drwxrwx--x. 2 boinc boinc      4096 Mar  9 13:57 shared
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc         0 Mar  9 13:57 boinc_lockfile
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc      2592 Mar  9 13:57 pandaJob.out
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc    990720 Mar  9 13:57 agis_schedconf.cvmfs.json
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc   1511578 Mar  9 13:57 agis_ddmendpoints.agis.ALL.json
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc       445 Mar  9 13:57 workernode_map.json
[2026-03-09 15:41:51] drwx------. 5 boinc boinc      4096 Mar  9 13:57 pilot3
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc 193139308 Mar  9 15:40 HITS.48966988._016009.pool.root.1
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc       529 Mar  9 15:40 boinc_task_state.xml
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc      1030 Mar  9 15:41 memory_monitor_summary.json
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc    288426 Mar  9 15:41 log.48966988._016009.job.log.tgz.1
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc      6355 Mar  9 15:41 heartbeat.json
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc        95 Mar  9 15:41 pilot_heartbeat.json
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc      5550 Mar  9 15:41 pilotlog.txt
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc      8192 Mar  9 15:41 boinc_mmap_file
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc        27 Mar  9 15:41 wrapper_checkpoint.txt
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc    896934 Mar  9 15:41 log.48966988._016009.job.log.1
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc       357 Mar  9 15:41 output.list
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc       620 Mar  9 15:41 runtime_log
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc   1198080 Mar  9 15:41 result.tar.gz
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc      9221 Mar  9 15:41 runtime_log.err
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc       662 Mar  9 15:41 o8YMDmR9LJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIzVLDmvkrAXn.diag
[2026-03-09 15:41:51] -rw-r--r--. 1 boinc boinc     20833 Mar  9 15:41 stderr.txt
[2026-03-09 15:41:51] HITS file was successfully produced:
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc 193139308 Mar  9 15:40 shared/HITS.pool.root.1
[2026-03-09 15:41:51]  *** Contents of shared directory: ***
[2026-03-09 15:41:51] total 397800
[2026-03-09 15:41:51] -rw-r--r--. 2 boinc boinc    597970 Mar  9 13:57 input.tar.gz
[2026-03-09 15:41:51] -rw-r--r--. 2 boinc boinc 212381600 Mar  9 13:57 ATLAS.root_0
[2026-03-09 15:41:51] -rw-r--r--. 2 boinc boinc     15845 Mar  9 13:57 start_atlas.sh
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc 193139308 Mar  9 15:40 HITS.pool.root.1
[2026-03-09 15:41:51] -rw-------. 1 boinc boinc   1198080 Mar  9 15:41 result.tar.gz
15:41:53 (2120898): run_atlas exited; CPU time 23558.123414
15:41:53 (2120898): called boinc_finish(0)

</stderr_txt>
]]>

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