Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:46:08 (345560): wrapper (7.7.26015): starting
12:46:08 (345560): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 12:46:08] Arguments: --nthreads 4
[2026-03-09 12:46:08] Threads: 4
[2026-03-09 12:46:08] Checking for CVMFS
[2026-03-09 12:46:08] No cvmfs_config command found, will try listing directly
[2026-03-09 12:46:08] CVMFS is ok
[2026-03-09 12:46:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 12:46:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 12:46:08] Further information can be found at the LHC@home message board.
[2026-03-09 12:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 12:46:08] Checking for apptainer binary...
[2026-03-09 12:46:08] which: no apptainer in ((null))
[2026-03-09 12:46:08] apptainer is not installed, using version from CVMFS
[2026-03-09 12:46:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 12:46:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-09 12:46:09] apptainer works
[2026-03-09 12:46:09] Set ATHENA_PROC_NUMBER=4
[2026-03-09 12:46:09] Set ATHENA_CORE_NUMBER=4
[2026-03-09 12:46:09] Starting ATLAS job with PandaID=7046195216
[2026-03-09 12:46:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 15:43:45]  *** The last 200 lines of the pilot log: ***
[2026-03-09 15:43:45] 2026-03-09 14:42:43,379 | INFO     | log transfer has been attempted: DONE
[2026-03-09 15:43:45] 2026-03-09 14:42:43,379 | INFO     | job 7046195216 has finished - writing final server update
[2026-03-09 15:43:45] 2026-03-09 14:42:43,379 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4124225/.job.ad'
[2026-03-09 15:43:45] 2026-03-09 14:42:43,379 | INFO     | total number of processed events: 400 (read)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,397 | INFO     | using path: /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7046195216/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,397 | INFO     | extracted standard info from prmon json
[2026-03-09 15:43:45] 2026-03-09 14:42:43,398 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 15:43:45] 2026-03-09 14:42:43,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 15:43:45] 2026-03-09 14:42:43,398 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 15:43:45] 2026-03-09 14:42:43,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 15:43:45] 2026-03-09 14:42:43,400 | INFO     | fitting pss+swap vs Time
[2026-03-09 15:43:45] 2026-03-09 14:42:43,400 | INFO     | sum of square deviations: 1633472487.5
[2026-03-09 15:43:45] 2026-03-09 14:42:43,401 | INFO     | sum of deviations: 9418468350.500004
[2026-03-09 15:43:45] 2026-03-09 14:42:43,401 | INFO     | mean x: 1773062078.5
[2026-03-09 15:43:45] 2026-03-09 14:42:43,401 | INFO     | mean y: 2309699.6839080458
[2026-03-09 15:43:45] 2026-03-09 14:42:43,401 | INFO     | intersect: -10221020780.391903
[2026-03-09 15:43:45] 2026-03-09 14:42:43,401 | INFO     | chi2: 1.9290323867602712
[2026-03-09 15:43:45] 2026-03-09 14:42:43,401 | INFO     | sum of square deviations: 1496660620.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,402 | INFO     | sum of deviations: 19942983455.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,402 | INFO     | mean x: 1773061926.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,402 | INFO     | mean y: 2321144.0473372783
[2026-03-09 15:43:45] 2026-03-09 14:42:43,402 | INFO     | intersect: -23623706147.903748
[2026-03-09 15:43:45] 2026-03-09 14:42:43,402 | INFO     | chi2: 1.108315993160546
[2026-03-09 15:43:45] 2026-03-09 14:42:43,402 | INFO     | current chi2=1.108315993160546 (change=42.54549582643783 %)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,402 | INFO     | sum of square deviations: 1367709365.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,402 | INFO     | sum of deviations: 19211935055.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,403 | INFO     | mean x: 1773061773.5
[2026-03-09 15:43:45] 2026-03-09 14:42:43,403 | INFO     | mean y: 2320279.2439024393
[2026-03-09 15:43:45] 2026-03-09 14:42:43,403 | INFO     | intersect: -24903517549.091152
[2026-03-09 15:43:45] 2026-03-09 14:42:43,403 | INFO     | chi2: 1.10896580124506
[2026-03-09 15:43:45] 2026-03-09 14:42:43,403 | INFO     | current chi2=1.10896580124506 (change=-0.058630218143929956 %)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,403 | INFO     | right removable region: 163
[2026-03-09 15:43:45] 2026-03-09 14:42:43,403 | INFO     | sum of square deviations: 1496660620.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,403 | INFO     | sum of deviations: -8309190151.999999
[2026-03-09 15:43:45] 2026-03-09 14:42:43,403 | INFO     | mean x: 1773062231.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,404 | INFO     | mean y: 2329128.3905325443
[2026-03-09 15:43:45] 2026-03-09 14:42:43,404 | INFO     | intersect: 9846051233.34466
[2026-03-09 15:43:45] 2026-03-09 14:42:43,404 | INFO     | chi2: 0.8418375134544576
[2026-03-09 15:43:45] 2026-03-09 14:42:43,404 | INFO     | current chi2=0.8418375134544576 (change=56.3595966956113 %)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,404 | INFO     | sum of square deviations: 1367709365.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,404 | INFO     | sum of deviations: -8996050121.5
[2026-03-09 15:43:45] 2026-03-09 14:42:43,404 | INFO     | mean x: 1773062383.5
[2026-03-09 15:43:45] 2026-03-09 14:42:43,404 | INFO     | mean y: 2329935.4817073173
[2026-03-09 15:43:45] 2026-03-09 14:42:43,404 | INFO     | intersect: 11664572279.279839
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | chi2: 0.8411257080293771
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | current chi2=0.8411257080293771 (change=0.08455377833657599 %)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | left removable region: 20
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | sum of square deviations: 906703512.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | sum of deviations: 635343487.0000001
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | mean x: 1773062353.0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | mean y: 2343373.3846153845
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | intersect: -1240073362.7528808
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | chi2: 0.00028429862286166616
[2026-03-09 15:43:45] 2026-03-09 14:42:43,405 | INFO     | current memory leak: 0.70 B/s (using 143 data points, chi2=0.00)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | could have reported an average CPU frequency of 3590 MHz (9 samples)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | ..............................
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | . Timing measurements:
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | . get job = 0 s
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | . initial setup = 4 s
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | . payload setup = 5 s
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | . stage-in = 0 s
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | . payload execution = 10561 s
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | . stage-out = 0 s
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | . log creation = 0 s
[2026-03-09 15:43:45] 2026-03-09 14:42:43,406 | INFO     | ..............................
[2026-03-09 15:43:45] 2026-03-09 14:42:43,454 | INFO     | 
[2026-03-09 15:43:45] 2026-03-09 14:42:43,454 | INFO     | job summary report
[2026-03-09 15:43:45] 2026-03-09 14:42:43,454 | INFO     | --------------------------------------------------
[2026-03-09 15:43:45] 2026-03-09 14:42:43,454 | INFO     | PanDA job id: 7046195216
[2026-03-09 15:43:45] 2026-03-09 14:42:43,454 | INFO     | task id: 48967059
[2026-03-09 15:43:45] 2026-03-09 14:42:43,454 | INFO     | errors: (none)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,454 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | pilot state: finished 
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | transexitcode: 0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | exeerrorcode: 0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | exeerrordiag: 
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | exitcode: 0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | exitmsg: OK
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | cpuconsumptiontime: 40735 s
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | nevents: 400
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | neventsw: 0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | pid: 356034
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | pgrp: 356034
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | corecount: 4
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | event service: False
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | sizes: {0: 2280171, 11: 2280171, 10570: 2308931, 10571: 2318211}
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | --------------------------------------------------
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | 
[2026-03-09 15:43:45] 2026-03-09 14:42:43,455 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/0
[2026-03-09 15:43:45] 2026-03-09 14:42:43,474 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,474 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,474 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,474 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | job 7046195216 has completed (purged errors)
[2026-03-09 15:43:45] 2026-03-09 14:42:43,475 | INFO     | overall cleanup function is called
[2026-03-09 15:43:45] 2026-03-09 14:42:44,482 | INFO     | --- collectZombieJob: --- 10, [356034]
[2026-03-09 15:43:45] 2026-03-09 14:42:44,482 | INFO     | zombie collector waiting for pid 356034
[2026-03-09 15:43:45] 2026-03-09 14:42:44,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 15:43:45] 2026-03-09 14:42:44,483 | INFO     | collected zombie processes
[2026-03-09 15:43:45] 2026-03-09 14:42:44,483 | INFO     | will attempt to kill all subprocesses of pid=356034
[2026-03-09 15:43:45] 2026-03-09 14:42:44,901 | INFO     | process IDs to be killed: [356034] (in reverse order)
[2026-03-09 15:43:45] 2026-03-09 14:42:45,112 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 15:43:45] 2026-03-09 14:42:45,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 15:43:45] 2026-03-09 14:42:45,139 | INFO     | did not find any defunct processes belonging to 356034
[2026-03-09 15:43:45] 2026-03-09 14:42:45,164 | INFO     | did not find any defunct processes belonging to 356034
[2026-03-09 15:43:45] 2026-03-09 14:42:45,164 | INFO     | ready for new job
[2026-03-09 15:43:45] 2026-03-09 14:42:45,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 15:43:45] 2026-03-09 14:42:45,165 | INFO     | **************************************
[2026-03-09 15:43:45] 2026-03-09 14:42:45,166 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 15:43:45] 2026-03-09 14:42:45,166 | INFO     | **************************************
[2026-03-09 15:43:45] 2026-03-09 14:42:45,166 | INFO     | 
[2026-03-09 15:43:45] 2026-03-09 14:42:45,171 | INFO     | architecture information:
[2026-03-09 15:43:45] 2026-03-09 14:42:45,171 | INFO     | executing command: cat /etc/os-release
[2026-03-09 15:43:45] 2026-03-09 14:42:45,183 | INFO     | cat /etc/os-release:
[2026-03-09 15:43:45] NAME="CentOS Linux"
[2026-03-09 15:43:45] VERSION="7 (Core)"
[2026-03-09 15:43:45] ID="centos"
[2026-03-09 15:43:45] ID_LIKE="rhel fedora"
[2026-03-09 15:43:45] VERSION_ID="7"
[2026-03-09 15:43:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 15:43:45] ANSI_COLOR="0;31"
[2026-03-09 15:43:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 15:43:45] HOME_URL="https://www.centos.org/"
[2026-03-09 15:43:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 15:43:45] 
[2026-03-09 15:43:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 15:43:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 15:43:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 15:43:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 15:43:45] 
[2026-03-09 15:43:45] 2026-03-09 14:42:45,184 | INFO     | **************************************
[2026-03-09 15:43:45] 2026-03-09 14:42:45,686 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/0
[2026-03-09 15:43:45] 2026-03-09 14:42:45,701 | INFO     | sufficient remaining disk space (22029533184 B)
[2026-03-09 15:43:45] 2026-03-09 14:42:45,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 15:43:45] 2026-03-09 14:42:45,701 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 15:43:45] 2026-03-09 14:42:45,701 | INFO     | update_server=False
[2026-03-09 15:43:45] 2026-03-09 14:42:45,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 15:43:45] 2026-03-09 14:42:45,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:43:45] 2026-03-09 14:42:45,701 | INFO     | aborting loop
[2026-03-09 15:43:45] 2026-03-09 14:42:45,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 15:43:45] 2026-03-09 14:42:46,279 | INFO     | all data control threads have been joined
[2026-03-09 15:43:45] 2026-03-09 14:42:46,706 | INFO     | [job] job monitor thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:46,706 | INFO     | [job] retrieve thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:46,767 | INFO     | all job control threads have been joined
[2026-03-09 15:43:45] 2026-03-09 14:42:46,972 | INFO     | [payload] failed_post thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:47,141 | INFO     | all payload control threads have been joined
[2026-03-09 15:43:45] 2026-03-09 14:42:47,183 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:47,284 | INFO     | [data] control thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:47,355 | INFO     | [job] validate thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:47,529 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:47,765 | INFO     | [data] copytool_in thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:47,772 | INFO     | [job] control thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:47,826 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:47,860 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:47,974 | INFO     | [data] copytool_out thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:48,146 | INFO     | [payload] control thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:48,170 | INFO     | [payload] validate_post thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:48,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:43:45] 2026-03-09 14:42:49,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 15:43:45] 2026-03-09 14:42:49,463 | INFO     | [job] queue monitor thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:42:53,029 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 15:43:45] 2026-03-09 14:43:16,490 | INFO     | PID=350092 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 15:43:45] 2026-03-09 14:43:16,490 | INFO     | .. there are 56 such processes running
[2026-03-09 15:43:45] 2026-03-09 14:43:16,491 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 15:43:45] 2026-03-09 14:43:16,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 15:43:45] 2026-03-09 14:43:16,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 15:43:45] 2026-03-09 14:43:38,068 | INFO     | [monitor] cgroup control has ended
[2026-03-09 15:43:45] 2026-03-09 14:43:40,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22867706488640)>', '<ExcThread(monitor, started 22867466266368)>']
[2026-03-09 15:43:45] 2026-03-09 14:43:40,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 15:43:45] 2026-03-09 14:43:40,600 | INFO     | [monitor] control thread has ended
[2026-03-09 15:43:45] 2026-03-09 14:43:45,051 | INFO     | all workflow threads have been joined
[2026-03-09 15:43:45] 2026-03-09 14:43:45,051 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 15:43:45] 2026-03-09 14:43:45,051 | INFO     | traces error code: 0
[2026-03-09 15:43:45] 2026-03-09 14:43:45,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 15:43:45] 2026-03-09 14:43:45,169 [wrapper] ==== pilot stdout END ====
[2026-03-09 15:43:45] 2026-03-09 14:43:45,172 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 15:43:45] 2026-03-09 14:43:45,174 [wrapper] pilotpid: 350092
[2026-03-09 15:43:45] 2026-03-09 14:43:45,176 [wrapper] Pilot exit status: 0
[2026-03-09 15:43:45] 2026-03-09 14:43:45,184 [wrapper] pandaids: 7046195216
[2026-03-09 15:43:45] 2026-03-09 14:43:45,297 [wrapper] cleanup supervisor_pilot 1994746 350093
[2026-03-09 15:43:45] 2026-03-09 14:43:45,300 [wrapper] Test setup, not cleaning
[2026-03-09 15:43:45] 2026-03-09 14:43:45,303 [wrapper] apfmon messages muted
[2026-03-09 15:43:45] 2026-03-09 14:43:45,305 [wrapper] ==== wrapper stdout END ====
[2026-03-09 15:43:45] 2026-03-09 14:43:45,307 [wrapper] ==== wrapper stderr END ====
[2026-03-09 15:43:45]  *** Error codes and diagnostics ***
[2026-03-09 15:43:45]     "exeErrorCode": 0,
[2026-03-09 15:43:45]     "exeErrorDiag": "",
[2026-03-09 15:43:45]     "pilotErrorCode": 0,
[2026-03-09 15:43:45]     "pilotErrorDiag": "",
[2026-03-09 15:43:45]  *** Listing of results directory ***
[2026-03-09 15:43:45] total 480508
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc    584627 Mar  8 11:55 pilot3.tar.gz
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc      5111 Mar  8 12:29 queuedata.json
[2026-03-09 15:43:45] -rwx------. 1 boinc boinc     36322 Mar  8 12:29 runpilot2-wrapper.sh
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc       100 Mar  9 12:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 15:43:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 12:46 run_atlas
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc       105 Mar  9 12:46 job.xml
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc      6709 Mar  9 12:46 init_data.xml
[2026-03-09 15:43:45] -rw-r--r--. 2 boinc boinc 226614140 Mar  9 12:46 EVNT.48967057._000012.pool.root.1
[2026-03-09 15:43:45] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:46 start_atlas.sh
[2026-03-09 15:43:45] drwxrwx--x. 2 boinc boinc      4096 Mar  9 12:46 shared
[2026-03-09 15:43:45] -rw-r--r--. 2 boinc boinc    597943 Mar  9 12:46 input.tar.gz
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc         0 Mar  9 12:46 boinc_lockfile
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc      2546 Mar  9 12:46 pandaJob.out
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc    990710 Mar  9 12:46 agis_schedconf.cvmfs.json
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc   1511578 Mar  9 12:46 agis_ddmendpoints.agis.ALL.json
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc       445 Mar  9 12:46 workernode_map.json
[2026-03-09 15:43:45] drwx------. 5 boinc boinc      4096 Mar  9 12:46 pilot3
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc 257785935 Mar  9 15:42 HITS.48967059._002105.pool.root.1
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc       530 Mar  9 15:42 boinc_task_state.xml
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc      1032 Mar  9 15:42 memory_monitor_summary.json
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc    362508 Mar  9 15:42 log.48967059._002105.job.log.tgz.1
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc      6357 Mar  9 15:42 heartbeat.json
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc        95 Mar  9 15:43 pilot_heartbeat.json
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc      8192 Mar  9 15:43 boinc_mmap_file
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc        28 Mar  9 15:43 wrapper_checkpoint.txt
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc      4829 Mar  9 15:43 pilotlog.txt
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc   1497763 Mar  9 15:43 log.48967059._002105.job.log.1
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc       357 Mar  9 15:43 output.list
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc       620 Mar  9 15:43 runtime_log
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc   1873920 Mar  9 15:43 result.tar.gz
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc      9222 Mar  9 15:43 runtime_log.err
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc       665 Mar  9 15:43 IXYMDmOVRJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8WWLDmh016Fo.diag
[2026-03-09 15:43:45] -rw-r--r--. 1 boinc boinc     20843 Mar  9 15:43 stderr.txt
[2026-03-09 15:43:45] HITS file was successfully produced:
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc 257785935 Mar  9 15:42 shared/HITS.pool.root.1
[2026-03-09 15:43:45]  *** Contents of shared directory: ***
[2026-03-09 15:43:45] total 475492
[2026-03-09 15:43:45] -rw-r--r--. 2 boinc boinc 226614140 Mar  9 12:46 ATLAS.root_0
[2026-03-09 15:43:45] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:46 start_atlas.sh
[2026-03-09 15:43:45] -rw-r--r--. 2 boinc boinc    597943 Mar  9 12:46 input.tar.gz
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc 257785935 Mar  9 15:42 HITS.pool.root.1
[2026-03-09 15:43:45] -rw-------. 1 boinc boinc   1873920 Mar  9 15:43 result.tar.gz
15:43:46 (345560): run_atlas exited; CPU time 41188.636808
15:43:46 (345560): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN