Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:08:20 (961444): wrapper (7.7.26015): starting
13:08:20 (961444): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 13:08:20] Arguments: --nthreads 4
[2026-03-10 13:08:20] Threads: 4
[2026-03-10 13:08:20] Checking for CVMFS
[2026-03-10 13:08:20] No cvmfs_config command found, will try listing directly
[2026-03-10 13:08:20] CVMFS is ok
[2026-03-10 13:08:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 13:08:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 13:08:20] Further information can be found at the LHC@home message board.
[2026-03-10 13:08:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 13:08:20] Checking for apptainer binary...
[2026-03-10 13:08:20] which: no apptainer in ((null))
[2026-03-10 13:08:20] apptainer is not installed, using version from CVMFS
[2026-03-10 13:08:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 13:08:20] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot148/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-10 13:08:20] apptainer works
[2026-03-10 13:08:20] Set ATHENA_PROC_NUMBER=4
[2026-03-10 13:08:20] Set ATHENA_CORE_NUMBER=4
[2026-03-10 13:08:20] Starting ATLAS job with PandaID=7039533879
[2026-03-10 13:08:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot148/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 14:42:48]  *** The last 200 lines of the pilot log: ***
[2026-03-10 14:42:48]  guid=898316a7-e629-4452-9c95-30d44a7cf9c3
[2026-03-10 14:42:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 14:42:48]  is_altstaged=None
[2026-03-10 14:42:48]  is_tar=False
[2026-03-10 14:42:48]  lfn=log.48955010._014042.job.log.tgz.1
[2026-03-10 14:42:48]  mtime=0
[2026-03-10 14:42:48]  protocol_id=None
[2026-03-10 14:42:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 14:42:48]  replicas=None
[2026-03-10 14:42:48]  scope=mc23_13p6TeV
[2026-03-10 14:42:48]  status=None
[2026-03-10 14:42:48]  status_code=0
[2026-03-10 14:42:48]  storage_token=
[2026-03-10 14:42:48]  surl=/var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7039533879/log.48955010._014042.job.log.tgz.1
[2026-03-10 14:42:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/66/log.48955010._014042.job.log.tgz.1
[2026-03-10 14:42:48]  workdir=None
[2026-03-10 14:42:48] ]
[2026-03-10 14:42:48] 2026-03-10 13:27:44,213 | INFO     | transferring file log.48955010._014042.job.log.tgz.1 from /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7039533879/log.48955010._014042.job.log.tgz.1 to /var/lib/
[2026-03-10 14:42:48] 2026-03-10 13:27:44,213 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7039533879/log.48955010._014042.job.log.tgz.1 /var/lib/boinc/var/slot148/slots/0/
[2026-03-10 14:42:48] 2026-03-10 13:27:44,228 | INFO     | adding to output.list: log.48955010._014042.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/66/log.48955010._014042.job.log.tg
[2026-03-10 14:42:48] 2026-03-10 13:27:44,229 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 14:42:48] 2026-03-10 13:27:44,229 | INFO     | summary of transferred files:
[2026-03-10 14:42:48] 2026-03-10 13:27:44,229 | INFO     |  -- lfn=log.48955010._014042.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 14:42:48] 2026-03-10 13:27:44,229 | INFO     | stage-out finished correctly
[2026-03-10 14:42:48] 2026-03-10 13:27:45,178 | INFO     | monitor loop #342: job 0:7039533879 is in state 'finished'
[2026-03-10 14:42:48] 2026-03-10 13:27:45,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 14:42:48] 2026-03-10 13:27:45,628 | INFO     | time since job start (4752s) is within the limit (349056.0s)
[2026-03-10 14:42:48] 2026-03-10 13:27:45,739 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 14:42:48] 2026-03-10 13:27:46,024 | INFO     | job 7039533879 has state=finished
[2026-03-10 14:42:48] 2026-03-10 13:27:46,024 | INFO     | preparing for final server update for job 7039533879 in state='finished'
[2026-03-10 14:42:48] 2026-03-10 13:27:46,024 | INFO     | reading metadata from: /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7039533879/jobReport.json
[2026-03-10 14:42:48] 2026-03-10 13:27:46,026 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot148/slots/0/workernode_map.json
[2026-03-10 14:42:48] 2026-03-10 13:27:46,027 | INFO     | this job has now completed (state=finished)
[2026-03-10 14:42:48] 2026-03-10 13:27:46,027 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 14:42:48] 2026-03-10 13:27:46,027 | INFO     | log transfer has been attempted: DONE
[2026-03-10 14:42:48] 2026-03-10 13:27:46,027 | INFO     | job 7039533879 has finished - writing final server update
[2026-03-10 14:42:48] 2026-03-10 13:27:46,027 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_391101/.job.ad'
[2026-03-10 14:42:48] 2026-03-10 13:27:46,027 | INFO     | total number of processed events: 400 (read)
[2026-03-10 14:42:48] 2026-03-10 13:27:46,046 | INFO     | using path: /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7039533879/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 14:42:48] 2026-03-10 13:27:46,046 | INFO     | extracted standard info from prmon json
[2026-03-10 14:42:48] 2026-03-10 13:27:46,046 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 14:42:48] 2026-03-10 13:27:46,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 14:42:48] 2026-03-10 13:27:46,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 14:42:48] 2026-03-10 13:27:46,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 14:42:48] 2026-03-10 13:27:46,048 | INFO     | fitting pss+swap vs Time
[2026-03-10 14:42:48] 2026-03-10 13:27:46,048 | INFO     | sum of square deviations: 110960220.0
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | sum of deviations: 574711927.0
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | mean x: 1773146974.0
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | mean y: 2324870.9295774647
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | intersect: -9181585491.556717
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | chi2: 0.0007495336995637363
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | current memory leak: 5.18 B/s (using 71 data points, chi2=0.00)
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | could have reported an average CPU frequency of 3572 MHz (6 samples)
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | ..............................
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | . Timing measurements:
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | . get job = 0 s
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | . initial setup = 5 s
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | . payload setup = 5 s
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | . stage-in = 0 s
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | . payload execution = 4729 s
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | . stage-out = 0 s
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | . log creation = 0 s
[2026-03-10 14:42:48] 2026-03-10 13:27:46,049 | INFO     | ..............................
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | 
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | job summary report
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | --------------------------------------------------
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | PanDA job id: 7039533879
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | task id: 48955010
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | errors: (none)
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | pilot state: finished 
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | transexitcode: 0
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | exeerrorcode: 0
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | exeerrordiag: 
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | exitcode: 0
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | exitmsg: OK
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | cpuconsumptiontime: 17987 s
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | nevents: 400
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | neventsw: 0
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | pid: 972693
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | pgrp: 972693
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | corecount: 4
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | event service: False
[2026-03-10 14:42:48] 2026-03-10 13:27:46,103 | INFO     | sizes: {0: 2279089, 1: 2280219, 11: 2280219, 4739: 2306504, 4740: 2315526, 4741: 2315582, 4742: 2315904}
[2026-03-10 14:42:48] 2026-03-10 13:27:46,104 | INFO     | --------------------------------------------------
[2026-03-10 14:42:48] 2026-03-10 13:27:46,104 | INFO     | 
[2026-03-10 14:42:48] 2026-03-10 13:27:46,104 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot148/slots/0
[2026-03-10 14:42:48] 2026-03-10 13:27:46,120 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | job 7039533879 has completed (purged errors)
[2026-03-10 14:42:48] 2026-03-10 13:27:46,121 | INFO     | overall cleanup function is called
[2026-03-10 14:42:48] 2026-03-10 13:27:47,128 | INFO     | --- collectZombieJob: --- 10, [972693]
[2026-03-10 14:42:48] 2026-03-10 13:27:47,128 | INFO     | zombie collector waiting for pid 972693
[2026-03-10 14:42:48] 2026-03-10 13:27:47,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 14:42:48] 2026-03-10 13:27:47,129 | INFO     | collected zombie processes
[2026-03-10 14:42:48] 2026-03-10 13:27:47,129 | INFO     | will attempt to kill all subprocesses of pid=972693
[2026-03-10 14:42:48] 2026-03-10 13:27:47,346 | INFO     | PID=966078 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 14:42:48] 2026-03-10 13:27:47,346 | INFO     | .. there are 37 such processes running
[2026-03-10 14:42:48] 2026-03-10 13:27:47,737 | INFO     | process IDs to be killed: [972693] (in reverse order)
[2026-03-10 14:42:48] 2026-03-10 13:27:47,943 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 14:42:48] 2026-03-10 13:27:47,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 14:42:48] 2026-03-10 13:27:47,974 | INFO     | did not find any defunct processes belonging to 972693
[2026-03-10 14:42:48] 2026-03-10 13:27:48,004 | INFO     | did not find any defunct processes belonging to 972693
[2026-03-10 14:42:48] 2026-03-10 13:27:48,004 | INFO     | ready for new job
[2026-03-10 14:42:48] 2026-03-10 13:27:48,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 14:42:48] 2026-03-10 13:27:48,005 | INFO     | **************************************
[2026-03-10 14:42:48] 2026-03-10 13:27:48,005 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 14:42:48] 2026-03-10 13:27:48,005 | INFO     | **************************************
[2026-03-10 14:42:48] 2026-03-10 13:27:48,005 | INFO     | 
[2026-03-10 14:42:48] 2026-03-10 13:27:48,011 | INFO     | architecture information:
[2026-03-10 14:42:48] 2026-03-10 13:27:48,011 | INFO     | executing command: cat /etc/os-release
[2026-03-10 14:42:48] 2026-03-10 13:27:48,025 | INFO     | cat /etc/os-release:
[2026-03-10 14:42:48] NAME="CentOS Linux"
[2026-03-10 14:42:48] VERSION="7 (Core)"
[2026-03-10 14:42:48] ID="centos"
[2026-03-10 14:42:48] ID_LIKE="rhel fedora"
[2026-03-10 14:42:48] VERSION_ID="7"
[2026-03-10 14:42:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 14:42:48] ANSI_COLOR="0;31"
[2026-03-10 14:42:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 14:42:48] HOME_URL="https://www.centos.org/"
[2026-03-10 14:42:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 14:42:48] 
[2026-03-10 14:42:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 14:42:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 14:42:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 14:42:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 14:42:48] 
[2026-03-10 14:42:48] 2026-03-10 13:27:48,025 | INFO     | **************************************
[2026-03-10 14:42:48] 2026-03-10 13:27:48,528 | INFO     | executing command: df -mP /var/lib/boinc/var/slot148/slots/0
[2026-03-10 14:42:48] 2026-03-10 13:27:48,543 | INFO     | sufficient remaining disk space (20447232000 B)
[2026-03-10 14:42:48] 2026-03-10 13:27:48,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 14:42:48] 2026-03-10 13:27:48,544 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 14:42:48] 2026-03-10 13:27:48,544 | INFO     | update_server=False
[2026-03-10 14:42:48] 2026-03-10 13:27:48,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 14:42:48] 2026-03-10 13:27:48,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 14:42:48] 2026-03-10 13:27:48,686 | INFO     | aborting loop
[2026-03-10 14:42:48] 2026-03-10 13:27:48,689 | INFO     | all data control threads have been joined
[2026-03-10 14:42:48] 2026-03-10 13:27:49,220 | INFO     | all payload control threads have been joined
[2026-03-10 14:42:48] 2026-03-10 13:27:49,453 | INFO     | all job control threads have been joined
[2026-03-10 14:42:48] 2026-03-10 13:27:49,549 | INFO     | [job] retrieve thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:49,691 | INFO     | [job] job monitor thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:49,693 | INFO     | [data] control thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:49,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 14:42:48] 2026-03-10 13:27:49,823 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:49,874 | INFO     | [job] validate thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:49,898 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:50,043 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:50,195 | INFO     | [data] copytool_in thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:50,225 | INFO     | [payload] control thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:50,276 | INFO     | [payload] validate_post thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:50,456 | INFO     | [job] control thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:50,840 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:51,090 | INFO     | [payload] failed_post thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:51,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 14:42:48] 2026-03-10 13:27:51,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 14:42:48] 2026-03-10 13:27:51,796 | INFO     | [data] copytool_out thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:52,112 | INFO     | [job] queue monitor thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:27:55,798 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 14:42:48] 2026-03-10 13:28:19,977 | INFO     | PID=966078 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 14:42:48] 2026-03-10 13:28:19,977 | INFO     | .. there are 37 such processes running
[2026-03-10 14:42:48] 2026-03-10 13:28:19,978 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 14:42:48] 2026-03-10 13:28:19,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 14:42:48] 2026-03-10 13:28:19,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 14:42:48] 2026-03-10 13:28:41,135 | INFO     | [monitor] cgroup control has ended
[2026-03-10 14:42:48] 2026-03-10 13:28:41,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23148643379008)>', '<ExcThread(monitor, started 23148402845440)>']
[2026-03-10 14:42:48] 2026-03-10 13:28:42,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 14:42:48] 2026-03-10 13:28:42,061 | INFO     | [monitor] control thread has ended
[2026-03-10 14:42:48] 2026-03-10 13:28:46,797 | INFO     | all workflow threads have been joined
[2026-03-10 14:42:48] 2026-03-10 13:28:46,798 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 14:42:48] 2026-03-10 13:28:46,798 | INFO     | traces error code: 0
[2026-03-10 14:42:48] 2026-03-10 13:28:46,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 14:42:48] 2026-03-10 13:28:46,958 [wrapper] ==== pilot stdout END ====
[2026-03-10 14:42:48] 2026-03-10 13:28:46,961 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 14:42:48] 2026-03-10 13:28:46,963 [wrapper] pilotpid: 966078
[2026-03-10 14:42:48] 2026-03-10 13:28:46,965 [wrapper] Pilot exit status: 0
[2026-03-10 14:42:48] 2026-03-10 13:28:46,973 [wrapper] pandaids: 7039533879
[2026-03-10 14:42:48] 2026-03-10 13:28:47,102 [wrapper] cleanup supervisor_pilot 1635393 966079
[2026-03-10 14:42:48] 2026-03-10 13:28:47,105 [wrapper] Test setup, not cleaning
[2026-03-10 14:42:48] 2026-03-10 13:28:47,107 [wrapper] apfmon messages muted
[2026-03-10 14:42:48] 2026-03-10 13:28:47,110 [wrapper] ==== wrapper stdout END ====
[2026-03-10 14:42:48] 2026-03-10 13:28:47,112 [wrapper] ==== wrapper stderr END ====
[2026-03-10 14:42:48]  *** Error codes and diagnostics ***
[2026-03-10 14:42:48]     "exeErrorCode": 0,
[2026-03-10 14:42:48]     "exeErrorDiag": "",
[2026-03-10 14:42:48]     "pilotErrorCode": 0,
[2026-03-10 14:42:48]     "pilotErrorDiag": "",
[2026-03-10 14:42:48]  *** Listing of results directory ***
[2026-03-10 14:42:48] total 613524
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc    584627 Mar  8 06:00 pilot3.tar.gz
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc      5111 Mar  8 06:13 queuedata.json
[2026-03-10 14:42:48] -rwx------. 1 boinc boinc     36322 Mar  8 06:14 runpilot2-wrapper.sh
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc       100 Mar 10 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 14:42:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 13:08 run_atlas
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc       105 Mar 10 13:08 job.xml
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc      6708 Mar 10 13:08 init_data.xml
[2026-03-10 14:42:48] -rw-r--r--. 2 boinc boinc 440905928 Mar 10 13:08 EVNT.46701403._001281.pool.root.1
[2026-03-10 14:42:48] -rw-r--r--. 2 boinc boinc     15845 Mar 10 13:08 start_atlas.sh
[2026-03-10 14:42:48] drwxrwx--x. 2 boinc boinc      4096 Mar 10 13:08 shared
[2026-03-10 14:42:48] -rw-r--r--. 2 boinc boinc    597959 Mar 10 13:08 input.tar.gz
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc         0 Mar 10 13:08 boinc_lockfile
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc      2563 Mar 10 13:08 pandaJob.out
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc   1005415 Mar 10 13:08 agis_schedconf.cvmfs.json
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc   1511578 Mar 10 13:08 agis_ddmendpoints.agis.ALL.json
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc       445 Mar 10 13:08 workernode_map.json
[2026-03-10 14:42:48] drwx------. 5 boinc boinc      4096 Mar 10 13:08 pilot3
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc 181440819 Mar 10 14:27 HITS.48955010._014042.pool.root.1
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc      1031 Mar 10 14:27 memory_monitor_summary.json
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc    283150 Mar 10 14:27 log.48955010._014042.job.log.tgz.1
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc      6354 Mar 10 14:27 heartbeat.json
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc       530 Mar 10 14:27 boinc_task_state.xml
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc        95 Mar 10 14:28 pilot_heartbeat.json
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc      4829 Mar 10 14:28 pilotlog.txt
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc    696409 Mar 10 14:28 log.48955010._014042.job.log.1
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc       357 Mar 10 14:28 output.list
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc       620 Mar 10 14:28 runtime_log
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc    993280 Mar 10 14:28 result.tar.gz
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc      9221 Mar 10 14:28 runtime_log.err
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc       662 Mar 10 14:28 flPNDmqeLJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZuVLDm68kZln.diag
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc        27 Mar 10 14:42 wrapper_checkpoint.txt
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc      8192 Mar 10 14:42 boinc_mmap_file
[2026-03-10 14:42:48] -rw-r--r--. 1 boinc boinc     21339 Mar 10 14:42 stderr.txt
[2026-03-10 14:42:48] HITS file was successfully produced:
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc 181440819 Mar 10 14:27 shared/HITS.pool.root.1
[2026-03-10 14:42:48]  *** Contents of shared directory: ***
[2026-03-10 14:42:48] total 609348
[2026-03-10 14:42:48] -rw-r--r--. 2 boinc boinc 440905928 Mar 10 13:08 ATLAS.root_0
[2026-03-10 14:42:48] -rw-r--r--. 2 boinc boinc     15845 Mar 10 13:08 start_atlas.sh
[2026-03-10 14:42:48] -rw-r--r--. 2 boinc boinc    597959 Mar 10 13:08 input.tar.gz
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc 181440819 Mar 10 14:27 HITS.pool.root.1
[2026-03-10 14:42:48] -rw-------. 1 boinc boinc    993280 Mar 10 14:28 result.tar.gz
14:42:49 (961444): run_atlas exited; CPU time 18211.150128
14:42:49 (961444): called boinc_finish(0)

</stderr_txt>
]]>

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