Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:12:38 (1380546): wrapper (7.7.26015): starting
07:12:38 (1380546): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 07:12:38] Arguments: --nthreads 4
[2026-03-09 07:12:38] Threads: 4
[2026-03-09 07:12:38] Checking for CVMFS
[2026-03-09 07:12:38] No cvmfs_config command found, will try listing directly
[2026-03-09 07:12:38] CVMFS is ok
[2026-03-09 07:12:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 07:12:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 07:12:38] Further information can be found at the LHC@home message board.
[2026-03-09 07:12:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 07:12:38] Checking for apptainer binary...
[2026-03-09 07:12:38] which: no apptainer in ((null))
[2026-03-09 07:12:38] apptainer is not installed, using version from CVMFS
[2026-03-09 07:12:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 07:12:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-09 07:12:38] apptainer works
[2026-03-09 07:12:38] Set ATHENA_PROC_NUMBER=4
[2026-03-09 07:12:38] Set ATHENA_CORE_NUMBER=4
[2026-03-09 07:12:38] Starting ATLAS job with PandaID=7039432391
[2026-03-09 07:12:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 08:32:05]  *** The last 200 lines of the pilot log: ***
[2026-03-09 08:32:05]  guid=07cf8ac4-a474-4cb0-b6ed-0d43a63a1641
[2026-03-09 08:32:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 08:32:05]  is_altstaged=None
[2026-03-09 08:32:05]  is_tar=False
[2026-03-09 08:32:05]  lfn=log.48955010._013779.job.log.tgz.1
[2026-03-09 08:32:05]  mtime=0
[2026-03-09 08:32:05]  protocol_id=None
[2026-03-09 08:32:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 08:32:05]  replicas=None
[2026-03-09 08:32:05]  scope=mc23_13p6TeV
[2026-03-09 08:32:05]  status=None
[2026-03-09 08:32:05]  status_code=0
[2026-03-09 08:32:05]  storage_token=
[2026-03-09 08:32:05]  surl=/var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7039432391/log.48955010._013779.job.log.tgz.1
[2026-03-09 08:32:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/64/log.48955010._013779.job.log.tgz.1
[2026-03-09 08:32:05]  workdir=None
[2026-03-09 08:32:05] ]
[2026-03-09 08:32:05] 2026-03-09 07:31:14,158 | INFO     | transferring file log.48955010._013779.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7039432391/log.48955010._013779.job.log.tgz.1 to /var/lib/
[2026-03-09 08:32:05] 2026-03-09 07:31:14,159 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7039432391/log.48955010._013779.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/0/
[2026-03-09 08:32:05] 2026-03-09 07:31:14,177 | INFO     | adding to output.list: log.48955010._013779.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/64/log.48955010._013779.job.log.tg
[2026-03-09 08:32:05] 2026-03-09 07:31:14,177 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 08:32:05] 2026-03-09 07:31:14,177 | INFO     | summary of transferred files:
[2026-03-09 08:32:05] 2026-03-09 07:31:14,178 | INFO     |  -- lfn=log.48955010._013779.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 08:32:05] 2026-03-09 07:31:14,178 | INFO     | stage-out finished correctly
[2026-03-09 08:32:05] 2026-03-09 07:31:14,231 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 08:32:05] 2026-03-09 07:31:15,527 | INFO     | job 7039432391 has state=finished
[2026-03-09 08:32:05] 2026-03-09 07:31:15,527 | INFO     | preparing for final server update for job 7039432391 in state='finished'
[2026-03-09 08:32:05] 2026-03-09 07:31:15,527 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7039432391/jobReport.json
[2026-03-09 08:32:05] 2026-03-09 07:31:15,529 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/0/workernode_map.json
[2026-03-09 08:32:05] 2026-03-09 07:31:15,529 | INFO     | this job has now completed (state=finished)
[2026-03-09 08:32:05] 2026-03-09 07:31:15,529 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 08:32:05] 2026-03-09 07:31:15,529 | INFO     | log transfer has been attempted: DONE
[2026-03-09 08:32:05] 2026-03-09 07:31:15,529 | INFO     | job 7039432391 has finished - writing final server update
[2026-03-09 08:32:05] 2026-03-09 07:31:15,529 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4124225/.job.ad'
[2026-03-09 08:32:05] 2026-03-09 07:31:15,529 | INFO     | total number of processed events: 400 (read)
[2026-03-09 08:32:05] 2026-03-09 07:31:15,547 | INFO     | using path: /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7039432391/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 08:32:05] 2026-03-09 07:31:15,548 | INFO     | extracted standard info from prmon json
[2026-03-09 08:32:05] 2026-03-09 07:31:15,548 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 08:32:05] 2026-03-09 07:31:15,548 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 08:32:05] 2026-03-09 07:31:15,548 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 08:32:05] 2026-03-09 07:31:15,548 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 08:32:05] 2026-03-09 07:31:15,550 | INFO     | fitting pss+swap vs Time
[2026-03-09 08:32:05] 2026-03-09 07:31:15,550 | INFO     | sum of square deviations: 106336877.5
[2026-03-09 08:32:05] 2026-03-09 07:31:15,550 | INFO     | sum of deviations: 579209060.5000001
[2026-03-09 08:32:05] 2026-03-09 07:31:15,550 | INFO     | mean x: 1773039201.5
[2026-03-09 08:32:05] 2026-03-09 07:31:15,550 | INFO     | mean y: 2328520.557142857
[2026-03-09 08:32:05] 2026-03-09 07:31:15,550 | INFO     | intersect: -9655284099.584778
[2026-03-09 08:32:05] 2026-03-09 07:31:15,550 | INFO     | chi2: 0.0003562441180595769
[2026-03-09 08:32:05] 2026-03-09 07:31:15,550 | INFO     | current memory leak: 5.45 B/s (using 70 data points, chi2=0.00)
[2026-03-09 08:32:05] 2026-03-09 07:31:15,550 | INFO     | could have reported an average CPU frequency of 3597 MHz (6 samples)
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | ..............................
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | . Timing measurements:
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | . get job = 0 s
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | . initial setup = 5 s
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | . payload setup = 5 s
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | . stage-in = 0 s
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | . payload execution = 4680 s
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | . stage-out = 0 s
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | . log creation = 0 s
[2026-03-09 08:32:05] 2026-03-09 07:31:15,551 | INFO     | ..............................
[2026-03-09 08:32:05] 2026-03-09 07:31:15,604 | INFO     | 
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | job summary report
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | --------------------------------------------------
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | PanDA job id: 7039432391
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | task id: 48955010
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | errors: (none)
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | pilot state: finished 
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | transexitcode: 0
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | exeerrorcode: 0
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | exeerrordiag: 
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | exitcode: 0
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | exitmsg: OK
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | cpuconsumptiontime: 17995 s
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | nevents: 400
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | neventsw: 0
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | pid: 1411488
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | pgrp: 1411488
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | corecount: 4
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | event service: False
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | sizes: {0: 2279927, 1: 2280217, 11: 2280217, 4689: 2306475, 4690: 2306474, 4692: 2315736, 4693: 2315874}
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | --------------------------------------------------
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | 
[2026-03-09 08:32:05] 2026-03-09 07:31:15,605 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/0
[2026-03-09 08:32:05] 2026-03-09 07:31:15,624 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 08:32:05] 2026-03-09 07:31:15,625 | INFO     | job 7039432391 has completed (purged errors)
[2026-03-09 08:32:05] 2026-03-09 07:31:15,626 | INFO     | overall cleanup function is called
[2026-03-09 08:32:05] 2026-03-09 07:31:16,632 | INFO     | --- collectZombieJob: --- 10, [1411488]
[2026-03-09 08:32:05] 2026-03-09 07:31:16,633 | INFO     | zombie collector waiting for pid 1411488
[2026-03-09 08:32:05] 2026-03-09 07:31:16,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 08:32:05] 2026-03-09 07:31:16,633 | INFO     | collected zombie processes
[2026-03-09 08:32:05] 2026-03-09 07:31:16,633 | INFO     | will attempt to kill all subprocesses of pid=1411488
[2026-03-09 08:32:05] 2026-03-09 07:31:17,180 | INFO     | process IDs to be killed: [1411488] (in reverse order)
[2026-03-09 08:32:05] 2026-03-09 07:31:17,405 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 08:32:05] 2026-03-09 07:31:17,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 08:32:05] 2026-03-09 07:31:17,460 | INFO     | did not find any defunct processes belonging to 1411488
[2026-03-09 08:32:05] 2026-03-09 07:31:17,519 | INFO     | did not find any defunct processes belonging to 1411488
[2026-03-09 08:32:05] 2026-03-09 07:31:17,519 | INFO     | ready for new job
[2026-03-09 08:32:05] 2026-03-09 07:31:17,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 08:32:05] 2026-03-09 07:31:17,521 | INFO     | **************************************
[2026-03-09 08:32:05] 2026-03-09 07:31:17,521 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 08:32:05] 2026-03-09 07:31:17,521 | INFO     | **************************************
[2026-03-09 08:32:05] 2026-03-09 07:31:17,521 | INFO     | 
[2026-03-09 08:32:05] 2026-03-09 07:31:17,529 | INFO     | architecture information:
[2026-03-09 08:32:05] 2026-03-09 07:31:17,530 | INFO     | executing command: cat /etc/os-release
[2026-03-09 08:32:05] 2026-03-09 07:31:17,547 | INFO     | cat /etc/os-release:
[2026-03-09 08:32:05] NAME="CentOS Linux"
[2026-03-09 08:32:05] VERSION="7 (Core)"
[2026-03-09 08:32:05] ID="centos"
[2026-03-09 08:32:05] ID_LIKE="rhel fedora"
[2026-03-09 08:32:05] VERSION_ID="7"
[2026-03-09 08:32:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 08:32:05] ANSI_COLOR="0;31"
[2026-03-09 08:32:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 08:32:05] HOME_URL="https://www.centos.org/"
[2026-03-09 08:32:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 08:32:05] 
[2026-03-09 08:32:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 08:32:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 08:32:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 08:32:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 08:32:05] 
[2026-03-09 08:32:05] 2026-03-09 07:31:17,547 | INFO     | **************************************
[2026-03-09 08:32:05] 2026-03-09 07:31:17,672 | WARNING  | process 1411488 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 08:32:05] 2026-03-09 07:31:17,991 | INFO     | using path: /var/lib/boinc/var/slot216/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 08:32:05] 2026-03-09 07:31:18,051 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/0
[2026-03-09 08:32:05] 2026-03-09 07:31:18,067 | INFO     | sufficient remaining disk space (25062014976 B)
[2026-03-09 08:32:05] 2026-03-09 07:31:18,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 08:32:05] 2026-03-09 07:31:18,067 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 08:32:05] 2026-03-09 07:31:18,067 | INFO     | update_server=False
[2026-03-09 08:32:05] 2026-03-09 07:31:18,067 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 08:32:05] 2026-03-09 07:31:18,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 08:32:05] 2026-03-09 07:31:18,268 | INFO     | all payload control threads have been joined
[2026-03-09 08:32:05] 2026-03-09 07:31:18,459 | INFO     | number of running child processes to parent process 1411488: 1
[2026-03-09 08:32:05] 2026-03-09 07:31:18,460 | INFO     | maximum number of monitored processes: 6
[2026-03-09 08:32:05] 2026-03-09 07:31:18,460 | INFO     | aborting job monitoring since job object (job id=7039432391) has expired
[2026-03-09 08:32:05] 2026-03-09 07:31:18,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 08:32:05] 2026-03-09 07:31:18,460 | INFO     | will abort loop
[2026-03-09 08:32:05] 2026-03-09 07:31:18,881 | INFO     | all job control threads have been joined
[2026-03-09 08:32:05] 2026-03-09 07:31:18,943 | INFO     | all data control threads have been joined
[2026-03-09 08:32:05] 2026-03-09 07:31:19,072 | INFO     | [job] retrieve thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,158 | INFO     | [job] validate thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,270 | INFO     | [payload] control thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,375 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,396 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,465 | INFO     | [job] job monitor thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,593 | INFO     | [payload] validate_post thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,658 | INFO     | [data] copytool_in thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,887 | INFO     | [job] control thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,936 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:19,948 | INFO     | [data] control thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:20,073 | INFO     | [data] copytool_out thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:20,126 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:20,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 08:32:05] 2026-03-09 07:31:20,592 | INFO     | [payload] failed_post thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:20,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 08:32:05] 2026-03-09 07:31:21,620 | INFO     | [job] queue monitor thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:24,293 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 08:32:05] 2026-03-09 07:31:47,454 | INFO     | PID=1388816 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 08:32:05] 2026-03-09 07:31:47,455 | INFO     | .. there are 47 such processes running
[2026-03-09 08:32:05] 2026-03-09 07:31:47,455 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 08:32:05] 2026-03-09 07:31:47,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 08:32:05] 2026-03-09 07:31:47,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 08:32:05] 2026-03-09 07:31:58,789 | INFO     | [monitor] cgroup control has ended
[2026-03-09 08:32:05] 2026-03-09 07:32:00,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22795810359104)>', '<ExcThread(monitor, started 22795571705600)>']
[2026-03-09 08:32:05] 2026-03-09 07:32:00,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 08:32:05] 2026-03-09 07:32:00,520 | INFO     | [monitor] control thread has ended
[2026-03-09 08:32:05] 2026-03-09 07:32:05,527 | INFO     | all workflow threads have been joined
[2026-03-09 08:32:05] 2026-03-09 07:32:05,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 08:32:05] 2026-03-09 07:32:05,527 | INFO     | traces error code: 0
[2026-03-09 08:32:05] 2026-03-09 07:32:05,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 08:32:05] 2026-03-09 07:32:05,683 [wrapper] ==== pilot stdout END ====
[2026-03-09 08:32:05] 2026-03-09 07:32:05,686 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 08:32:05] 2026-03-09 07:32:05,688 [wrapper] pilotpid: 1388816
[2026-03-09 08:32:05] 2026-03-09 07:32:05,693 [wrapper] Pilot exit status: 0
[2026-03-09 08:32:05] 2026-03-09 07:32:05,701 [wrapper] pandaids: 7039432391
[2026-03-09 08:32:05] 2026-03-09 07:32:05,823 [wrapper] cleanup supervisor_pilot 2027381 1388817
[2026-03-09 08:32:05] 2026-03-09 07:32:05,825 [wrapper] Test setup, not cleaning
[2026-03-09 08:32:05] 2026-03-09 07:32:05,827 [wrapper] apfmon messages muted
[2026-03-09 08:32:05] 2026-03-09 07:32:05,828 [wrapper] ==== wrapper stdout END ====
[2026-03-09 08:32:05] 2026-03-09 07:32:05,830 [wrapper] ==== wrapper stderr END ====
[2026-03-09 08:32:05]  *** Error codes and diagnostics ***
[2026-03-09 08:32:05]     "exeErrorCode": 0,
[2026-03-09 08:32:05]     "exeErrorDiag": "",
[2026-03-09 08:32:05]     "pilotErrorCode": 0,
[2026-03-09 08:32:05]     "pilotErrorDiag": "",
[2026-03-09 08:32:05]  *** Listing of results directory ***
[2026-03-09 08:32:05] total 617532
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc    584627 Mar  8 03:20 pilot3.tar.gz
[2026-03-09 08:32:05] -rwx------. 1 boinc boinc     36322 Mar  8 03:21 runpilot2-wrapper.sh
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc      5111 Mar  8 03:21 queuedata.json
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc       100 Mar  9 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 08:32:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 07:12 run_atlas
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc       105 Mar  9 07:12 job.xml
[2026-03-09 08:32:05] -rw-r--r--. 2 boinc boinc 436930699 Mar  9 07:12 EVNT.46701403._001276.pool.root.1
[2026-03-09 08:32:05] -rw-r--r--. 2 boinc boinc     15845 Mar  9 07:12 start_atlas.sh
[2026-03-09 08:32:05] drwxrwx--x. 2 boinc boinc      4096 Mar  9 07:12 shared
[2026-03-09 08:32:05] -rw-r--r--. 2 boinc boinc    597953 Mar  9 07:12 input.tar.gz
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc      6709 Mar  9 07:12 init_data.xml
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc         0 Mar  9 07:12 boinc_lockfile
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc      2562 Mar  9 07:12 pandaJob.out
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc    999108 Mar  9 07:12 agis_schedconf.cvmfs.json
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc   1511578 Mar  9 07:12 agis_ddmendpoints.agis.ALL.json
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc       444 Mar  9 07:12 workernode_map.json
[2026-03-09 08:32:05] drwx------. 5 boinc boinc      4096 Mar  9 07:12 pilot3
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc 189563941 Mar  9 08:30 HITS.48955010._013779.pool.root.1
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc       530 Mar  9 08:30 boinc_task_state.xml
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc      1031 Mar  9 08:31 memory_monitor_summary.json
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc        95 Mar  9 08:31 pilot_heartbeat.json
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc    271265 Mar  9 08:31 log.48955010._013779.job.log.tgz.1
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc      6352 Mar  9 08:31 heartbeat.json
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc      8192 Mar  9 08:31 boinc_mmap_file
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc        27 Mar  9 08:31 wrapper_checkpoint.txt
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc      5363 Mar  9 08:32 pilotlog.txt
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc    690702 Mar  9 08:32 log.48955010._013779.job.log.1
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc       357 Mar  9 08:32 output.list
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc       620 Mar  9 08:32 runtime_log
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc    983040 Mar  9 08:32 result.tar.gz
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc      9221 Mar  9 08:32 runtime_log.err
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc       663 Mar  9 08:32 fbFNDmCxIJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiSVLDmECPwLn.diag
[2026-03-09 08:32:05] -rw-r--r--. 1 boinc boinc     21302 Mar  9 08:32 stderr.txt
[2026-03-09 08:32:05] HITS file was successfully produced:
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc 189563941 Mar  9 08:30 shared/HITS.pool.root.1
[2026-03-09 08:32:05]  *** Contents of shared directory: ***
[2026-03-09 08:32:05] total 613384
[2026-03-09 08:32:05] -rw-r--r--. 2 boinc boinc 436930699 Mar  9 07:12 ATLAS.root_0
[2026-03-09 08:32:05] -rw-r--r--. 2 boinc boinc     15845 Mar  9 07:12 start_atlas.sh
[2026-03-09 08:32:05] -rw-r--r--. 2 boinc boinc    597953 Mar  9 07:12 input.tar.gz
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc 189563941 Mar  9 08:30 HITS.pool.root.1
[2026-03-09 08:32:05] -rw-------. 1 boinc boinc    983040 Mar  9 08:32 result.tar.gz
08:32:07 (1380546): run_atlas exited; CPU time 18198.346825
08:32:07 (1380546): called boinc_finish(0)

</stderr_txt>
]]>

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