Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-08 08:40:13 (62775): vboxwrapper version 26210
2026-03-08 08:40:13 (62775): BOINC client version: 8.0.4
2026-03-08 08:40:14 (62775): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2026-03-08 08:40:14 (62775): Successfully copied 'init_data.xml' to the shared directory.
2026-03-08 08:40:15 (62775): Create VM. (boinc_41c1de7e4646c47d, slot#2)
2026-03-08 08:40:15 (62775): Setting Memory Size for VM. (4200MB)
2026-03-08 08:40:16 (62775): Setting CPU Count for VM. (2)
2026-03-08 08:40:16 (62775): Setting Chipset Options for VM.
2026-03-08 08:40:16 (62775): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-08 08:40:17 (62775): Setting Boot Options for VM.
2026-03-08 08:40:18 (62775): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-08 08:40:18 (62775): Enabling VM Network Access.
2026-03-08 08:40:18 (62775): Disabling USB Support for VM.
2026-03-08 08:40:19 (62775): Disabling COM Port Support for VM.
2026-03-08 08:40:19 (62775): Disabling LPT Port Support for VM.
2026-03-08 08:40:19 (62775): Disabling Audio Support for VM.
2026-03-08 08:40:20 (62775): Disabling Clipboard Support for VM.
2026-03-08 08:40:20 (62775): Disabling Drag and Drop Support for VM.
2026-03-08 08:40:21 (62775): Adding storage controller(s) to VM.
2026-03-08 08:40:21 (62775): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-08 08:40:29 (62775): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-08 08:40:30 (62775): forwarding host port 52455 to guest port 80
2026-03-08 08:40:30 (62775): Enabling remote desktop for VM.
2026-03-08 08:40:31 (62775): Enabling shared directory for VM.
2026-03-08 08:40:32 (62775): Starting VM using VBoxManage interface. (boinc_41c1de7e4646c47d, slot#2)
2026-03-08 08:40:34 (62775): Successfully started VM. (PID = '63265')
2026-03-08 08:40:34 (62775): Reporting VM Process ID to BOINC.
2026-03-08 08:40:34 (62775): Guest Log: BIOS: VirtualBox 7.0.16
2026-03-08 08:40:34 (62775): Guest Log: CPUID EDX: 0x178bfbff
2026-03-08 08:40:34 (62775): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-08 08:40:34 (62775): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-08 08:40:34 (62775): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-08 08:40:34 (62775): Detected: Web Application Enabled (http://localhost:52455)
2026-03-08 08:40:34 (62775): Detected: Remote Desktop Enabled (localhost:40805)
2026-03-08 08:40:34 (62775): Preference change detected
2026-03-08 08:40:34 (62775): Setting CPU throttle for VM. (100%)
2026-03-08 08:40:34 (62775): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-08 08:40:37 (62775): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-08 08:40:37 (62775): Guest Log: BIOS: Booting from Hard Disk...
2026-03-08 08:40:42 (62775): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-08 08:40:42 (62775): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-08 08:40:42 (62775): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-08 08:41:13 (62775): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-08 08:41:13 (62775): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-08 08:42:45 (62775): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-08 08:42:45 (62775): Guest Log: 00:00:00.001951 main     Log opened 2026-03-08T15:42:43.571095000Z
2026-03-08 08:42:45 (62775): Guest Log: 00:00:00.002981 main     OS Product: Linux
2026-03-08 08:42:45 (62775): Guest Log: 00:00:00.003407 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-08 08:42:45 (62775): Guest Log: 00:00:00.003654 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-08 08:42:45 (62775): Guest Log: 00:00:00.003884 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-08 08:42:45 (62775): Guest Log: 00:00:00.003890 main     Process ID: 1259
2026-03-08 08:42:45 (62775): Guest Log: 00:00:00.003895 main     Package type: LINUX_64BITS_GENERIC
2026-03-08 08:42:45 (62775): Guest Log: 00:00:00.015539 main     5.2.32 r132073 started. Verbose level = 0
2026-03-08 08:42:47 (62775): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-08 08:42:47 (62775): Guest Log: [INFO] Mounting shared directory
2026-03-08 08:42:48 (62775): Guest Log: [INFO] Checking for init_data.xml
2026-03-08 08:42:58 (62775): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-08 08:42:58 (62775): Guest Log: [INFO] Detected branch: prod
2026-03-08 08:42:59 (62775): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-08 08:42:59 (62775): Guest Log: Copying input files
2026-03-08 08:43:15 (62775): Guest Log: Copied input files into RunAtlas.
2026-03-08 08:43:16 (62775): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-08 08:43:16 (62775): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-08 08:43:16 (62775): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-08 08:43:16 (62775): Guest Log: Further information can be found at the LHC@home message board.
2026-03-08 08:43:43 (62775): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-08 08:43:50 (62775): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-08 08:43:50 (62775): Guest Log: 2.6.3.0 1538 0 32092 157044 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-08 08:44:03 (62775): Guest Log: copied the webapp to /var/www
2026-03-08 08:44:04 (62775): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-08 08:44:04 (62775): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-08 08:44:05 (62775): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-08 08:44:06 (62775): Guest Log:  *** Starting ATLAS job. (PandaID=7032738016 taskID=48843158) ***
2026-03-08 09:23:06 (62775): Guest Log:  *** Job finished ***
2026-03-08 09:23:06 (62775): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:22:51,814 | INFO     | all workflow threads have been joined
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:22:51,817 | INFO     | end of generic workflow (traces error code: 0)
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:22:51,820 | INFO     | traces error code: 0
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:22:51,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:00,976 | INFO     | PID=5977 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:00,981 | INFO     | found 0 job(s) in 20 queues
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:00,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:00,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:00,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:00,991 | INFO     | [monitor] control thread has ended
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:02,260 [wrapper] ==== pilot stdout END ====
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:02,378 [wrapper] ==== wrapper stdout RESUME ====
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:02,449 [wrapper] pilotpid: 5977
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:02,523 [wrapper] Pilot exit status: 0
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:02,959 [wrapper] pandaids: 7032738016
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:03,504 [wrapper] cleanup supervisor_pilot 25355 5978
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:03,582 [wrapper] Test setup, not cleaning
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:03,659 [wrapper] apfmon messages muted
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:03,738 [wrapper] ==== wrapper stdout END ====
2026-03-08 09:23:06 (62775): Guest Log: 2026-03-08 16:23:03,830 [wrapper] ==== wrapper stderr END ====
2026-03-08 09:23:06 (62775): Guest Log:  *** Error codes and diagnostics ***
2026-03-08 09:23:06 (62775): Guest Log:     "exeErrorCode": 65,
2026-03-08 09:23:06 (62775): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-03-08 09:23:06 (62775): Guest Log:     "pilotErrorCode": 1305,
2026-03-08 09:23:06 (62775): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-03-08 09:23:06 (62775): Guest Log:  *** Listing of results directory ***
2026-03-08 09:23:06 (62775): Guest Log: total 4904
2026-03-08 09:23:06 (62775): Guest Log: -rw-r--r--. 1 atlas atlas  584627 Feb 28 05:38 pilot3.tar.gz
2026-03-08 09:23:06 (62775): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Feb 28 05:40 queuedata.json
2026-03-08 09:23:06 (62775): Guest Log: -rwx------. 1 atlas atlas   36322 Feb 28 05:40 runpilot2-wrapper.sh
2026-03-08 09:23:06 (62775): Guest Log: -rw-r--r--. 1 atlas atlas  597951 Mar  8 15:43 input.tar.gz
2026-03-08 09:23:06 (62775): Guest Log: -rw-r--r--. 1 atlas atlas   15845 Mar  8 15:43 start_atlas.sh
2026-03-08 09:23:06 (62775): Guest Log: -rw-r--r--. 1 atlas atlas    6146 Mar  8 15:43 init_data.xml
2026-03-08 09:23:06 (62775): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar  8 15:43 EVNT.48450300._000004.pool.root.1 -> /data/./ATLAS.root_0
2026-03-08 09:23:06 (62775): Guest Log: -rw-r--r--. 1 atlas atlas    2600 Mar  8 15:44 pandaJob.out
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas 1521291 Mar  8 15:48 agis_ddmendpoints.agis.ALL.json
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas     401 Mar  8 15:49 workernode_map.json
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas  999212 Mar  8 15:49 agis_schedconf.cvmfs.json
2026-03-08 09:23:06 (62775): Guest Log: drwx------. 5 atlas atlas    4096 Mar  8 15:49 pilot3
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas   80582 Mar  8 16:20 log.48843158._000018.job.log.tgz.1
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas      95 Mar  8 16:22 pilot_heartbeat.json
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas    6672 Mar  8 16:22 heartbeat.json
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas     744 Mar  8 16:23 pilotlog.txt
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas  502245 Mar  8 16:23 log.48843158._000018.job.log.1
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas     188 Mar  8 16:23 output.list
2026-03-08 09:23:06 (62775): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar  8 16:23 runtime_log
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas  604160 Mar  8 16:23 result.tar.gz
2026-03-08 09:23:06 (62775): Guest Log: -rw-r--r--. 1 atlas atlas    8647 Mar  8 16:23 runtime_log.err
2026-03-08 09:23:06 (62775): Guest Log: -rw-------. 1 atlas atlas     668 Mar  8 16:23 q2vNDmwESG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsR6KDmmYxPIm.diag
2026-03-08 09:23:06 (62775): Guest Log: Looking for outputfile HITS.48843158._000018.pool.root.1
2026-03-08 09:23:06 (62775): Guest Log: No HITS file was produced
2026-03-08 09:23:06 (62775): Guest Log: Successfully finished the ATLAS job!
2026-03-08 09:23:06 (62775): Guest Log: Copying the results back to the shared directory!
2026-03-08 09:23:07 (62775): Guest Log:  *** Contents of shared directory: ***
2026-03-08 09:23:07 (62775): Guest Log: total 265880
2026-03-08 09:23:07 (62775): Guest Log: -rw-r--r--. 1 root root 271028178 Mar  8 15:40 ATLAS.root_0
2026-03-08 09:23:07 (62775): Guest Log: -rw-r--r--. 1 root root      6146 Mar  8 15:40 init_data.xml
2026-03-08 09:23:07 (62775): Guest Log: -rw-r--r--. 1 root root    597951 Mar  8 15:40 input.tar.gz
2026-03-08 09:23:07 (62775): Guest Log: -rw-r--r--. 1 root root    604160 Mar  8 16:23 result.tar.gz
2026-03-08 09:23:07 (62775): Guest Log: -rw-r--r--. 1 root root     15845 Mar  8 15:40 start_atlas.sh
2026-03-08 09:23:08 (62775): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-08 09:23:08 (62775): VM Completion File Detected.
2026-03-08 09:23:08 (62775): Powering off VM.
2026-03-08 09:23:09 (62775): Successfully stopped VM.
2026-03-08 09:23:09 (62775): Deregistering VM. (boinc_41c1de7e4646c47d, slot#2)
2026-03-08 09:23:09 (62775): Removing network bandwidth throttle group from VM.
2026-03-08 09:23:10 (62775): Removing VM from VirtualBox.
2026-03-08 09:23:15 (62775): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN