Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:30:36 (67225): wrapper (7.7.26015): starting
17:30:36 (67225): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 17:30:36] Arguments: --nthreads 4
[2026-03-09 17:30:36] Threads: 4
[2026-03-09 17:30:36] Checking for CVMFS
[2026-03-09 17:30:36] No cvmfs_config command found, will try listing directly
[2026-03-09 17:30:36] CVMFS is ok
[2026-03-09 17:30:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 17:30:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 17:30:36] Further information can be found at the LHC@home message board.
[2026-03-09 17:30:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 17:30:36] Checking for apptainer binary...
[2026-03-09 17:30:36] which: no apptainer in ((null))
[2026-03-09 17:30:36] apptainer is not installed, using version from CVMFS
[2026-03-09 17:30:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 17:30:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot188/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-09 17:30:36] apptainer works
[2026-03-09 17:30:37] Set ATHENA_PROC_NUMBER=4
[2026-03-09 17:30:37] Set ATHENA_CORE_NUMBER=4
[2026-03-09 17:30:37] Starting ATLAS job with PandaID=7042052271
[2026-03-09 17:30:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot188/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:46:16 (977848): wrapper (7.7.26015): starting
18:46:16 (977848): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 18:46:16] Arguments: --nthreads 4
[2026-03-09 18:46:16] Threads: 4
[2026-03-09 18:46:16] This job has been restarted, cleaning up previous attempt
[2026-03-09 18:46:16] Checking for CVMFS
[2026-03-09 18:46:16] No cvmfs_config command found, will try listing directly
[2026-03-09 18:46:16] CVMFS is ok
[2026-03-09 18:46:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 18:46:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 18:46:16] Further information can be found at the LHC@home message board.
[2026-03-09 18:46:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 18:46:16] Checking for apptainer binary...
[2026-03-09 18:46:16] which: no apptainer in ((null))
[2026-03-09 18:46:16] apptainer is not installed, using version from CVMFS
[2026-03-09 18:46:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 18:46:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot188/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-09 18:46:16] apptainer works
[2026-03-09 18:46:16] Set ATHENA_PROC_NUMBER=4
[2026-03-09 18:46:16] Set ATHENA_CORE_NUMBER=4
[2026-03-09 18:46:16] Starting ATLAS job with PandaID=7042052271
[2026-03-09 18:46:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot188/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 20:41:39]  *** The last 200 lines of the pilot log: ***
[2026-03-09 20:41:39] 2026-03-09 19:40:53,812 | INFO     | job 7042052271 has finished - writing final server update
[2026-03-09 20:41:39] 2026-03-09 19:40:53,812 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_923802/.job.ad'
[2026-03-09 20:41:39] 2026-03-09 19:40:53,812 | INFO     | total number of processed events: 400 (read)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,830 | INFO     | using path: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7042052271/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,831 | INFO     | extracted standard info from prmon json
[2026-03-09 20:41:39] 2026-03-09 19:40:53,831 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 20:41:39] 2026-03-09 19:40:53,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 20:41:39] 2026-03-09 19:40:53,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 20:41:39] 2026-03-09 19:40:53,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 20:41:39] 2026-03-09 19:40:53,832 | INFO     | fitting pss+swap vs Time
[2026-03-09 20:41:39] 2026-03-09 19:40:53,833 | INFO     | sum of square deviations: 447383272.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,833 | INFO     | sum of deviations: 4910642129.999999
[2026-03-09 20:41:39] 2026-03-09 19:40:53,833 | INFO     | mean x: 1773081814.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,833 | INFO     | mean y: 2290512.5840707966
[2026-03-09 20:41:39] 2026-03-09 19:40:53,833 | INFO     | intersect: -19459702817.745953
[2026-03-09 20:41:39] 2026-03-09 19:40:53,833 | INFO     | chi2: 1.9074550600781062
[2026-03-09 20:41:39] 2026-03-09 19:40:53,833 | INFO     | sum of square deviations: 390582207.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | sum of deviations: 11615764082.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | mean x: 1773081661.5
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | mean y: 2307824.407407407
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | intersect: -52728456426.98252
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | chi2: 1.0777429709863897
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | current chi2=1.0777429709863897 (change=43.49838203043911 %)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | sum of square deviations: 338804492.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | sum of deviations: 11007770676.999996
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | mean x: 1773081509.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | mean y: 2306032.572815534
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | intersect: -57605178825.39389
[2026-03-09 20:41:39] 2026-03-09 19:40:53,834 | INFO     | chi2: 1.0791988112627662
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | current chi2=1.0791988112627662 (change=-0.1350823262659765 %)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | right removable region: 102
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | sum of square deviations: 390582207.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | sum of deviations: -5585929484.5
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | mean x: 1773081966.5
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | mean y: 2317923.861111111
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | intersect: 25360131612.254734
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | chi2: 0.8602149814638316
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | current chi2=0.8602149814638316 (change=54.90247715568158 %)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,835 | INFO     | sum of square deviations: 338804492.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | sum of deviations: -5755952253.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | mean x: 1773082119.0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | mean y: 2318417.4660194176
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | intersect: 30125224868.222473
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | chi2: 0.8608632177277139
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | current chi2=0.8608632177277139 (change=-0.07535747200998787 %)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | left removable region: 20
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | sum of square deviations: 170944600.5
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | sum of deviations: 416221361.00000006
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | mean x: 1773082088.5
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | mean y: 2339804.1707317075
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | intersect: -4314816969.904695
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | chi2: 0.00010479265179142386
[2026-03-09 20:41:39] 2026-03-09 19:40:53,836 | INFO     | current memory leak: 2.43 B/s (using 82 data points, chi2=0.00)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | could have reported an average CPU frequency of 3575 MHz (7 samples)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | ..............................
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | . Timing measurements:
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | . get job = 0 s
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | . initial setup = 0 s
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | . payload setup = 3 s
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | . stage-in = 0 s
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | . payload execution = 6848 s
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | . stage-out = 0 s
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | . log creation = 0 s
[2026-03-09 20:41:39] 2026-03-09 19:40:53,837 | INFO     | ..............................
[2026-03-09 20:41:39] 2026-03-09 19:40:53,884 | INFO     | 
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | job summary report
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | --------------------------------------------------
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | PanDA job id: 7042052271
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | task id: 48929183
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | errors: (none)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | pilot state: finished 
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | transexitcode: 0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | exeerrorcode: 0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | exeerrordiag: 
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | exitcode: 0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | exitmsg: OK
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | cpuconsumptiontime: 26484 s
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | nevents: 400
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | neventsw: 0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | pid: 1010386
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | pgrp: 1010386
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | corecount: 4
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | event service: False
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | sizes: {0: 2279889, 1: 2280265, 11: 2280293, 6855: 2307509, 6856: 2316531, 6859: 2316587, 6862: 2316909}
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | --------------------------------------------------
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | 
[2026-03-09 20:41:39] 2026-03-09 19:40:53,885 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot188/slots/0
[2026-03-09 20:41:39] 2026-03-09 19:40:53,900 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,900 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,900 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,900 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | job 7042052271 has completed (purged errors)
[2026-03-09 20:41:39] 2026-03-09 19:40:53,901 | INFO     | overall cleanup function is called
[2026-03-09 20:41:39] 2026-03-09 19:40:54,907 | INFO     | --- collectZombieJob: --- 10, [1010386]
[2026-03-09 20:41:39] 2026-03-09 19:40:54,907 | INFO     | zombie collector waiting for pid 1010386
[2026-03-09 20:41:39] 2026-03-09 19:40:54,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 20:41:39] 2026-03-09 19:40:54,907 | INFO     | collected zombie processes
[2026-03-09 20:41:39] 2026-03-09 19:40:54,907 | INFO     | will attempt to kill all subprocesses of pid=1010386
[2026-03-09 20:41:39] 2026-03-09 19:40:55,336 | INFO     | process IDs to be killed: [1010386] (in reverse order)
[2026-03-09 20:41:39] 2026-03-09 19:40:55,545 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 20:41:39] 2026-03-09 19:40:55,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 20:41:39] 2026-03-09 19:40:55,571 | INFO     | did not find any defunct processes belonging to 1010386
[2026-03-09 20:41:39] 2026-03-09 19:40:55,597 | INFO     | did not find any defunct processes belonging to 1010386
[2026-03-09 20:41:39] 2026-03-09 19:40:55,597 | INFO     | ready for new job
[2026-03-09 20:41:39] 2026-03-09 19:40:55,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 20:41:39] 2026-03-09 19:40:55,598 | INFO     | **************************************
[2026-03-09 20:41:39] 2026-03-09 19:40:55,599 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 20:41:39] 2026-03-09 19:40:55,599 | INFO     | **************************************
[2026-03-09 20:41:39] 2026-03-09 19:40:55,599 | INFO     | 
[2026-03-09 20:41:39] 2026-03-09 19:40:55,605 | INFO     | architecture information:
[2026-03-09 20:41:39] 2026-03-09 19:40:55,605 | INFO     | executing command: cat /etc/os-release
[2026-03-09 20:41:39] 2026-03-09 19:40:55,618 | INFO     | cat /etc/os-release:
[2026-03-09 20:41:39] NAME="CentOS Linux"
[2026-03-09 20:41:39] VERSION="7 (Core)"
[2026-03-09 20:41:39] ID="centos"
[2026-03-09 20:41:39] ID_LIKE="rhel fedora"
[2026-03-09 20:41:39] VERSION_ID="7"
[2026-03-09 20:41:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 20:41:39] ANSI_COLOR="0;31"
[2026-03-09 20:41:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 20:41:39] HOME_URL="https://www.centos.org/"
[2026-03-09 20:41:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 20:41:39] 
[2026-03-09 20:41:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 20:41:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 20:41:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 20:41:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 20:41:39] 
[2026-03-09 20:41:39] 2026-03-09 19:40:55,618 | INFO     | **************************************
[2026-03-09 20:41:39] 2026-03-09 19:40:56,121 | INFO     | executing command: df -mP /var/lib/boinc/var/slot188/slots/0
[2026-03-09 20:41:39] 2026-03-09 19:40:56,138 | INFO     | sufficient remaining disk space (20680015872 B)
[2026-03-09 20:41:39] 2026-03-09 19:40:56,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 20:41:39] 2026-03-09 19:40:56,138 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 20:41:39] 2026-03-09 19:40:56,138 | INFO     | update_server=False
[2026-03-09 20:41:39] 2026-03-09 19:40:56,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 20:41:39] 2026-03-09 19:40:56,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:41:39] 2026-03-09 19:40:56,138 | INFO     | aborting loop
[2026-03-09 20:41:39] 2026-03-09 19:40:56,217 | INFO     | all data control threads have been joined
[2026-03-09 20:41:39] 2026-03-09 19:40:56,300 | INFO     | all payload control threads have been joined
[2026-03-09 20:41:39] 2026-03-09 19:40:56,302 | INFO     | all job control threads have been joined
[2026-03-09 20:41:39] 2026-03-09 19:40:56,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 20:41:39] 2026-03-09 19:40:57,143 | INFO     | [job] retrieve thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,143 | INFO     | [job] job monitor thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,178 | INFO     | [job] validate thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,182 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 20:41:39] 2026-03-09 19:40:57,222 | INFO     | [data] control thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,223 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,305 | INFO     | [job] control thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,305 | INFO     | [payload] control thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,390 | INFO     | [payload] failed_post thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,838 | INFO     | [data] copytool_in thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,839 | INFO     | [payload] validate_post thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:57,848 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:58,412 | INFO     | [data] copytool_out thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:40:58,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:41:39] 2026-03-09 19:40:59,901 | INFO     | [job] queue monitor thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:41:01,197 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:41:06,627 | INFO     | job.realtimelogging is not enabled
[2026-03-09 20:41:39] 2026-03-09 19:41:07,632 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 20:41:39] 2026-03-09 19:41:25,665 | INFO     | PID=982385 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 20:41:39] 2026-03-09 19:41:25,666 | INFO     | .. there are 59 such processes running
[2026-03-09 20:41:39] 2026-03-09 19:41:25,666 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 20:41:39] 2026-03-09 19:41:25,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 20:41:39] 2026-03-09 19:41:25,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 20:41:39] 2026-03-09 19:41:32,461 | INFO     | [monitor] cgroup control has ended
[2026-03-09 20:41:39] 2026-03-09 19:41:34,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23095576889152)>', '<ExcThread(monitor, started 23095328098048)>']
[2026-03-09 20:41:39] 2026-03-09 19:41:34,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 20:41:39] 2026-03-09 19:41:34,697 | INFO     | [monitor] control thread has ended
[2026-03-09 20:41:39] 2026-03-09 19:41:39,222 | INFO     | all workflow threads have been joined
[2026-03-09 20:41:39] 2026-03-09 19:41:39,222 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 20:41:39] 2026-03-09 19:41:39,222 | INFO     | traces error code: 0
[2026-03-09 20:41:39] 2026-03-09 19:41:39,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 20:41:39] 2026-03-09 19:41:39,353 [wrapper] ==== pilot stdout END ====
[2026-03-09 20:41:39] 2026-03-09 19:41:39,355 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 20:41:39] 2026-03-09 19:41:39,356 [wrapper] pilotpid: 982385
[2026-03-09 20:41:39] 2026-03-09 19:41:39,358 [wrapper] Pilot exit status: 0
[2026-03-09 20:41:39] 2026-03-09 19:41:39,366 [wrapper] pandaids: 7042052271 7042052271
[2026-03-09 20:41:39] 2026-03-09 19:41:39,480 [wrapper] cleanup supervisor_pilot 2184280 982386
[2026-03-09 20:41:39] 2026-03-09 19:41:39,482 [wrapper] Test setup, not cleaning
[2026-03-09 20:41:39] 2026-03-09 19:41:39,484 [wrapper] apfmon messages muted
[2026-03-09 20:41:39] 2026-03-09 19:41:39,486 [wrapper] ==== wrapper stdout END ====
[2026-03-09 20:41:39] 2026-03-09 19:41:39,487 [wrapper] ==== wrapper stderr END ====
[2026-03-09 20:41:39]  *** Error codes and diagnostics ***
[2026-03-09 20:41:39]     "exeErrorCode": 0,
[2026-03-09 20:41:39]     "exeErrorDiag": "",
[2026-03-09 20:41:39]     "pilotErrorCode": 0,
[2026-03-09 20:41:39]     "pilotErrorDiag": "",
[2026-03-09 20:41:39]  *** Listing of results directory ***
[2026-03-09 20:41:39] total 733776
[2026-03-09 20:41:39] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc    584627 Mar  5 19:20 pilot3.tar.gz
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc      5111 Mar  5 19:22 queuedata.json
[2026-03-09 20:41:39] -rwx------. 1 boinc boinc     36322 Mar  5 19:24 runpilot2-wrapper.sh
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc       100 Mar  9 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 20:41:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 17:30 run_atlas
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc       105 Mar  9 17:30 job.xml
[2026-03-09 20:41:39] -rw-r--r--. 3 boinc boinc 275400964 Mar  9 17:30 EVNT.48929179._000006.pool.root.1
[2026-03-09 20:41:39] -rw-r--r--. 3 boinc boinc 275400964 Mar  9 17:30 ATLAS.root_0
[2026-03-09 20:41:39] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:30 start_atlas.sh
[2026-03-09 20:41:39] drwxrwx--x. 2 boinc boinc      4096 Mar  9 17:30 shared
[2026-03-09 20:41:39] -rw-r--r--. 2 boinc boinc    597957 Mar  9 17:30 input.tar.gz
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc         0 Mar  9 17:30 boinc_lockfile
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc      2588 Mar  9 18:46 pandaJob.out
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc   1002716 Mar  9 18:46 agis_schedconf.cvmfs.json
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc       445 Mar  9 18:46 workernode_map.json
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc      6715 Mar  9 18:46 init_data.xml
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc 194043782 Mar  9 20:40 HITS.48929183._000148.pool.root.1
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc       531 Mar  9 20:40 boinc_task_state.xml
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc      1030 Mar  9 20:40 memory_monitor_summary.json
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc   1511578 Mar  9 20:40 agis_ddmendpoints.agis.ALL.json
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc    309652 Mar  9 20:40 log.48929183._000148.job.log.tgz.1
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc        96 Mar  9 20:40 pilot_heartbeat.json
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc      6346 Mar  9 20:40 heartbeat.json
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc        28 Mar  9 20:41 wrapper_checkpoint.txt
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc      8192 Mar  9 20:41 boinc_mmap_file
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc      4901 Mar  9 20:41 pilotlog.txt
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc    989720 Mar  9 20:41 log.48929183._000148.job.log.1
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc       357 Mar  9 20:41 output.list
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc       620 Mar  9 20:41 runtime_log
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc   1320960 Mar  9 20:41 result.tar.gz
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc      9298 Mar  9 20:41 runtime_log.err
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc       788 Mar  9 20:41 R6JKDmsXSI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxdMLDmzublRm.diag
[2026-03-09 20:41:39] -rw-r--r--. 1 boinc boinc     22797 Mar  9 20:41 stderr.txt
[2026-03-09 20:41:39] HITS file was successfully produced:
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc 194043782 Mar  9 20:40 shared/HITS.pool.root.1
[2026-03-09 20:41:39]  *** Contents of shared directory: ***
[2026-03-09 20:41:39] total 460344
[2026-03-09 20:41:39] -rw-r--r--. 3 boinc boinc 275400964 Mar  9 17:30 ATLAS.root_0
[2026-03-09 20:41:39] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:30 start_atlas.sh
[2026-03-09 20:41:39] -rw-r--r--. 2 boinc boinc    597957 Mar  9 17:30 input.tar.gz
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc 194043782 Mar  9 20:40 HITS.pool.root.1
[2026-03-09 20:41:39] -rw-------. 1 boinc boinc   1320960 Mar  9 20:41 result.tar.gz
20:41:41 (977848): run_atlas exited; CPU time 26761.740437
20:41:41 (977848): called boinc_finish(0)

</stderr_txt>
]]>

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