Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:35:29 (1655954): wrapper (7.7.26015): starting
13:35:29 (1655954): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 13:35:29] Arguments: --nthreads 4
[2026-03-09 13:35:29] Threads: 4
[2026-03-09 13:35:29] Checking for CVMFS
[2026-03-09 13:35:29] No cvmfs_config command found, will try listing directly
[2026-03-09 13:35:29] CVMFS is ok
[2026-03-09 13:35:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 13:35:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 13:35:29] Further information can be found at the LHC@home message board.
[2026-03-09 13:35:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 13:35:29] Checking for apptainer binary...
[2026-03-09 13:35:29] which: no apptainer in ((null))
[2026-03-09 13:35:29] apptainer is not installed, using version from CVMFS
[2026-03-09 13:35:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 13:35:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-09 13:35:29] apptainer works
[2026-03-09 13:35:29] Set ATHENA_PROC_NUMBER=4
[2026-03-09 13:35:29] Set ATHENA_CORE_NUMBER=4
[2026-03-09 13:35:29] Starting ATLAS job with PandaID=7045869112
[2026-03-09 13:35:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 15:34:59]  *** The last 200 lines of the pilot log: ***
[2026-03-09 15:34:59] 2026-03-09 14:34:25,704 | INFO     | log transfer has been attempted: DONE
[2026-03-09 15:34:59] 2026-03-09 14:34:25,704 | INFO     | job 7045869112 has finished - writing final server update
[2026-03-09 15:34:59] 2026-03-09 14:34:25,705 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3751646/.job.ad'
[2026-03-09 15:34:59] 2026-03-09 14:34:25,705 | INFO     | total number of processed events: 400 (read)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,722 | INFO     | using path: /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7045869112/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,723 | INFO     | extracted standard info from prmon json
[2026-03-09 15:34:59] 2026-03-09 14:34:25,723 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 15:34:59] 2026-03-09 14:34:25,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 15:34:59] 2026-03-09 14:34:25,723 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 15:34:59] 2026-03-09 14:34:25,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 15:34:59] 2026-03-09 14:34:25,724 | INFO     | fitting pss+swap vs Time
[2026-03-09 15:34:59] 2026-03-09 14:34:25,725 | INFO     | sum of square deviations: 496597218.0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,725 | INFO     | sum of deviations: 6354906251.000003
[2026-03-09 15:34:59] 2026-03-09 14:34:25,725 | INFO     | mean x: 1773063300.0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,725 | INFO     | mean y: 2301575.512820513
[2026-03-09 15:34:59] 2026-03-09 14:34:25,725 | INFO     | intersect: -22687416852.568855
[2026-03-09 15:34:59] 2026-03-09 14:34:25,725 | INFO     | chi2: 1.9424805032726482
[2026-03-09 15:34:59] 2026-03-09 14:34:25,725 | INFO     | sum of square deviations: 435610028.0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | sum of deviations: 13213263893.5
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | mean x: 1773063147.5
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | mean y: 2318080.973214286
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | intersect: -53779619344.39114
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | chi2: 1.1226565370927524
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | current chi2=1.1226565370927524 (change=42.205003591988415 %)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | sum of square deviations: 379832238.0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | sum of deviations: 12533557699.000002
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | mean x: 1773062995.0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | mean y: 2316222.5887850467
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | intersect: -58504532666.29951
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | chi2: 1.1239705374530065
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | current chi2=1.1239705374530065 (change=-0.11704384349436388 %)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,726 | INFO     | right removable region: 106
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | sum of square deviations: 435610028.0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | sum of deviations: -5566682032.5
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | mean x: 1773063452.5
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | mean y: 2330642.026785714
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | intersect: 22660395950.64766
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | chi2: 0.8498372609951632
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | current chi2=0.8498372609951632 (change=56.24989493776765 %)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | sum of square deviations: 379832238.0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | sum of deviations: -5915048610.0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | mean x: 1773063605.0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | mean y: 2331585.495327103
[2026-03-09 15:34:59] 2026-03-09 14:34:25,727 | INFO     | intersect: 27613883115.2442
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | chi2: 0.8498861706167105
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | current chi2=0.8498861706167105 (change=-0.005755174995500974 %)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | left removable region: 20
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | sum of square deviations: 197203697.5
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | sum of deviations: 327836966.5000001
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | mean x: 1773063574.5
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | mean y: 2352403.3139534886
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | intersect: -2945238291.204982
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | chi2: 3.66455243239698e-05
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | current memory leak: 1.66 B/s (using 86 data points, chi2=0.00)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,728 | INFO     | could have reported an average CPU frequency of 3595 MHz (7 samples)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | ..............................
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | . Timing measurements:
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | . get job = 0 s
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | . initial setup = 4 s
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | . payload setup = 5 s
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | . stage-in = 0 s
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | . payload execution = 7100 s
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | . stage-out = 0 s
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | . log creation = 0 s
[2026-03-09 15:34:59] 2026-03-09 14:34:25,729 | INFO     | ..............................
[2026-03-09 15:34:59] 2026-03-09 14:34:25,777 | INFO     | 
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | job summary report
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | --------------------------------------------------
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | PanDA job id: 7045869112
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | task id: 48997926
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | errors: (none)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | pilot state: finished 
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | transexitcode: 0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | exeerrorcode: 0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | exeerrordiag: 
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | exitcode: 0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | exitmsg: OK
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | cpuconsumptiontime: 27390 s
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | nevents: 400
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | neventsw: 0
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | pid: 1668694
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | pgrp: 1668694
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | corecount: 4
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | event service: False
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | sizes: {0: 2280278, 11: 2280278, 7109: 2307555, 7111: 2316633, 7113: 2316799}
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | --------------------------------------------------
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | 
[2026-03-09 15:34:59] 2026-03-09 14:34:25,778 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/1
[2026-03-09 15:34:59] 2026-03-09 14:34:25,795 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | job 7045869112 has completed (purged errors)
[2026-03-09 15:34:59] 2026-03-09 14:34:25,796 | INFO     | overall cleanup function is called
[2026-03-09 15:34:59] 2026-03-09 14:34:26,803 | INFO     | --- collectZombieJob: --- 10, [1668694]
[2026-03-09 15:34:59] 2026-03-09 14:34:26,803 | INFO     | zombie collector waiting for pid 1668694
[2026-03-09 15:34:59] 2026-03-09 14:34:26,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 15:34:59] 2026-03-09 14:34:26,803 | INFO     | collected zombie processes
[2026-03-09 15:34:59] 2026-03-09 14:34:26,803 | INFO     | will attempt to kill all subprocesses of pid=1668694
[2026-03-09 15:34:59] 2026-03-09 14:34:27,236 | INFO     | process IDs to be killed: [1668694] (in reverse order)
[2026-03-09 15:34:59] 2026-03-09 14:34:27,453 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 15:34:59] 2026-03-09 14:34:27,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 15:34:59] 2026-03-09 14:34:27,479 | INFO     | did not find any defunct processes belonging to 1668694
[2026-03-09 15:34:59] 2026-03-09 14:34:27,504 | INFO     | did not find any defunct processes belonging to 1668694
[2026-03-09 15:34:59] 2026-03-09 14:34:27,504 | INFO     | ready for new job
[2026-03-09 15:34:59] 2026-03-09 14:34:27,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 15:34:59] 2026-03-09 14:34:27,506 | INFO     | **************************************
[2026-03-09 15:34:59] 2026-03-09 14:34:27,506 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 15:34:59] 2026-03-09 14:34:27,506 | INFO     | **************************************
[2026-03-09 15:34:59] 2026-03-09 14:34:27,506 | INFO     | 
[2026-03-09 15:34:59] 2026-03-09 14:34:27,511 | INFO     | architecture information:
[2026-03-09 15:34:59] 2026-03-09 14:34:27,512 | INFO     | executing command: cat /etc/os-release
[2026-03-09 15:34:59] 2026-03-09 14:34:27,524 | INFO     | cat /etc/os-release:
[2026-03-09 15:34:59] NAME="CentOS Linux"
[2026-03-09 15:34:59] VERSION="7 (Core)"
[2026-03-09 15:34:59] ID="centos"
[2026-03-09 15:34:59] ID_LIKE="rhel fedora"
[2026-03-09 15:34:59] VERSION_ID="7"
[2026-03-09 15:34:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 15:34:59] ANSI_COLOR="0;31"
[2026-03-09 15:34:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 15:34:59] HOME_URL="https://www.centos.org/"
[2026-03-09 15:34:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 15:34:59] 
[2026-03-09 15:34:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 15:34:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 15:34:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 15:34:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 15:34:59] 
[2026-03-09 15:34:59] 2026-03-09 14:34:27,525 | INFO     | **************************************
[2026-03-09 15:34:59] 2026-03-09 14:34:28,027 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/1
[2026-03-09 15:34:59] 2026-03-09 14:34:28,044 | INFO     | sufficient remaining disk space (19867369472 B)
[2026-03-09 15:34:59] 2026-03-09 14:34:28,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 15:34:59] 2026-03-09 14:34:28,044 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 15:34:59] 2026-03-09 14:34:28,045 | INFO     | update_server=False
[2026-03-09 15:34:59] 2026-03-09 14:34:28,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 15:34:59] 2026-03-09 14:34:28,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:34:59] 2026-03-09 14:34:28,045 | INFO     | aborting loop
[2026-03-09 15:34:59] 2026-03-09 14:34:28,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 15:34:59] 2026-03-09 14:34:29,049 | INFO     | [job] retrieve thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:29,049 | INFO     | [job] job monitor thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:29,079 | INFO     | all data control threads have been joined
[2026-03-09 15:34:59] 2026-03-09 14:34:29,142 | INFO     | [job] validate thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:29,214 | INFO     | all payload control threads have been joined
[2026-03-09 15:34:59] 2026-03-09 14:34:29,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 15:34:59] 2026-03-09 14:34:29,251 | INFO     | all job control threads have been joined
[2026-03-09 15:34:59] 2026-03-09 14:34:29,331 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:29,531 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:29,564 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:29,576 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:29,849 | INFO     | [payload] failed_post thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:29,964 | INFO     | [data] copytool_in thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:30,084 | INFO     | [data] control thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:30,218 | INFO     | [payload] control thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:30,256 | INFO     | [job] control thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:30,466 | INFO     | [payload] validate_post thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:30,696 | INFO     | [data] copytool_out thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:30,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:34:59] 2026-03-09 14:34:31,794 | INFO     | [job] queue monitor thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:33,249 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 15:34:59] 2026-03-09 14:34:52,312 | INFO     | [monitor] cgroup control has ended
[2026-03-09 15:34:59] 2026-03-09 14:34:53,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23289338386240)>', '<ExcThread(monitor, started 23289100777216)>']
[2026-03-09 15:34:59] 2026-03-09 14:34:58,208 | INFO     | PID=1660500 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 15:34:59] 2026-03-09 14:34:58,209 | INFO     | .. there are 57 such processes running
[2026-03-09 15:34:59] 2026-03-09 14:34:58,209 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 15:34:59] 2026-03-09 14:34:58,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 15:34:59] 2026-03-09 14:34:58,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 15:34:59] 2026-03-09 14:34:58,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 15:34:59] 2026-03-09 14:34:58,209 | INFO     | [monitor] control thread has ended
[2026-03-09 15:34:59] 2026-03-09 14:34:58,840 | INFO     | all workflow threads have been joined
[2026-03-09 15:34:59] 2026-03-09 14:34:58,840 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 15:34:59] 2026-03-09 14:34:58,840 | INFO     | traces error code: 0
[2026-03-09 15:34:59] 2026-03-09 14:34:58,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 15:34:59] 2026-03-09 14:34:58,993 [wrapper] ==== pilot stdout END ====
[2026-03-09 15:34:59] 2026-03-09 14:34:58,996 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 15:34:59] 2026-03-09 14:34:58,998 [wrapper] pilotpid: 1660500
[2026-03-09 15:34:59] 2026-03-09 14:34:58,999 [wrapper] Pilot exit status: 0
[2026-03-09 15:34:59] 2026-03-09 14:34:59,008 [wrapper] pandaids: 7045869112
[2026-03-09 15:34:59] 2026-03-09 14:34:59,121 [wrapper] cleanup supervisor_pilot 2844456 1660501
[2026-03-09 15:34:59] 2026-03-09 14:34:59,123 [wrapper] Test setup, not cleaning
[2026-03-09 15:34:59] 2026-03-09 14:34:59,126 [wrapper] apfmon messages muted
[2026-03-09 15:34:59] 2026-03-09 14:34:59,129 [wrapper] ==== wrapper stdout END ====
[2026-03-09 15:34:59] 2026-03-09 14:34:59,131 [wrapper] ==== wrapper stderr END ====
[2026-03-09 15:34:59]  *** Error codes and diagnostics ***
[2026-03-09 15:34:59]     "exeErrorCode": 0,
[2026-03-09 15:34:59]     "exeErrorDiag": "",
[2026-03-09 15:34:59]     "pilotErrorCode": 0,
[2026-03-09 15:34:59]     "pilotErrorDiag": "",
[2026-03-09 15:34:59]  *** Listing of results directory ***
[2026-03-09 15:34:59] total 597264
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc      5111 Mar  8 06:00 queuedata.json
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc    584627 Mar  8 06:00 pilot3.tar.gz
[2026-03-09 15:34:59] -rwx------. 1 boinc boinc     36322 Mar  8 06:01 runpilot2-wrapper.sh
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc       100 Mar  9 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 15:34:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 13:35 run_atlas
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc       105 Mar  9 13:35 job.xml
[2026-03-09 15:34:59] -rw-r--r--. 2 boinc boinc 340036218 Mar  9 13:35 EVNT.48997924._000071.pool.root.1
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc      6709 Mar  9 13:35 init_data.xml
[2026-03-09 15:34:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 13:35 start_atlas.sh
[2026-03-09 15:34:59] drwxrwx--x. 2 boinc boinc      4096 Mar  9 13:35 shared
[2026-03-09 15:34:59] -rw-r--r--. 2 boinc boinc    597965 Mar  9 13:35 input.tar.gz
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc         0 Mar  9 13:35 boinc_lockfile
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc      2586 Mar  9 13:35 pandaJob.out
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc    990710 Mar  9 13:35 agis_schedconf.cvmfs.json
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc   1511578 Mar  9 13:35 agis_ddmendpoints.agis.ALL.json
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc       444 Mar  9 13:35 workernode_map.json
[2026-03-09 15:34:59] drwx------. 5 boinc boinc      4096 Mar  9 13:35 pilot3
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc 265011359 Mar  9 15:33 HITS.48997926._001770.pool.root.1
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc        95 Mar  9 15:34 pilot_heartbeat.json
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc       529 Mar  9 15:34 boinc_task_state.xml
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc      1031 Mar  9 15:34 memory_monitor_summary.json
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc    291887 Mar  9 15:34 log.48997926._001770.job.log.tgz.1
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc      6350 Mar  9 15:34 heartbeat.json
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc        27 Mar  9 15:34 wrapper_checkpoint.txt
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc      8192 Mar  9 15:34 boinc_mmap_file
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc      4830 Mar  9 15:34 pilotlog.txt
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc   1023249 Mar  9 15:34 log.48997926._001770.job.log.1
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc       357 Mar  9 15:34 output.list
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc       620 Mar  9 15:34 runtime_log
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc   1331200 Mar  9 15:34 result.tar.gz
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc      9221 Mar  9 15:34 runtime_log.err
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc       663 Mar  9 15:34 d9oKDmLRLJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYiVLDmTJf6am.diag
[2026-03-09 15:34:59] -rw-r--r--. 1 boinc boinc     20860 Mar  9 15:34 stderr.txt
[2026-03-09 15:34:59] HITS file was successfully produced:
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc 265011359 Mar  9 15:33 shared/HITS.pool.root.1
[2026-03-09 15:34:59]  *** Contents of shared directory: ***
[2026-03-09 15:34:59] total 592780
[2026-03-09 15:34:59] -rw-r--r--. 2 boinc boinc 340036218 Mar  9 13:35 ATLAS.root_0
[2026-03-09 15:34:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 13:35 start_atlas.sh
[2026-03-09 15:34:59] -rw-r--r--. 2 boinc boinc    597965 Mar  9 13:35 input.tar.gz
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc 265011359 Mar  9 15:33 HITS.pool.root.1
[2026-03-09 15:34:59] -rw-------. 1 boinc boinc   1331200 Mar  9 15:34 result.tar.gz
15:35:00 (1655954): run_atlas exited; CPU time 27706.918887
15:35:00 (1655954): called boinc_finish(0)

</stderr_txt>
]]>

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