Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:11:08 (1308705): wrapper (7.7.26015): starting
14:11:08 (1308705): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 14:11:08] Arguments: --nthreads 4
[2026-03-08 14:11:08] Threads: 4
[2026-03-08 14:11:08] Checking for CVMFS
[2026-03-08 14:11:08] No cvmfs_config command found, will try listing directly
[2026-03-08 14:11:08] CVMFS is ok
[2026-03-08 14:11:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 14:11:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 14:11:08] Further information can be found at the LHC@home message board.
[2026-03-08 14:11:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 14:11:08] Checking for apptainer binary...
[2026-03-08 14:11:08] which: no apptainer in ((null))
[2026-03-08 14:11:08] apptainer is not installed, using version from CVMFS
[2026-03-08 14:11:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 14:11:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-08 14:11:08] apptainer works
[2026-03-08 14:11:08] Set ATHENA_PROC_NUMBER=4
[2026-03-08 14:11:08] Set ATHENA_CORE_NUMBER=4
[2026-03-08 14:11:08] Starting ATLAS job with PandaID=7045343694
[2026-03-08 14:11:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 16:12:41]  *** The last 200 lines of the pilot log: ***
[2026-03-08 16:12:41] 2026-03-08 15:12:00,370 | INFO     | mean y: 2307795.0168067226
[2026-03-08 16:12:41] 2026-03-08 15:12:00,370 | INFO     | intersect: -18682680130.579903
[2026-03-08 16:12:41] 2026-03-08 15:12:00,371 | INFO     | chi2: 1.9011451119857758
[2026-03-08 16:12:41] 2026-03-08 15:12:00,371 | INFO     | sum of square deviations: 459366752.5
[2026-03-08 16:12:41] 2026-03-08 15:12:00,371 | INFO     | sum of deviations: 12359582496.499998
[2026-03-08 16:12:41] 2026-03-08 15:12:00,371 | INFO     | mean x: 1772978951.5
[2026-03-08 16:12:41] 2026-03-08 15:12:00,371 | INFO     | mean y: 2323737.149122807
[2026-03-08 16:12:41] 2026-03-08 15:12:00,371 | INFO     | intersect: -47700910108.931885
[2026-03-08 16:12:41] 2026-03-08 15:12:00,371 | INFO     | chi2: 1.1160289523404348
[2026-03-08 16:12:41] 2026-03-08 15:12:00,371 | INFO     | current chi2=1.1160289523404348 (change=41.29701382054287 %)
[2026-03-08 16:12:41] 2026-03-08 15:12:00,371 | INFO     | sum of square deviations: 401533110.0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | sum of deviations: 11637710906.000002
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | mean x: 1772978799.0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | mean y: 2321832.5137614678
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | intersect: -51384261717.79192
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | chi2: 1.1176620730301146
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | current chi2=1.1176620730301146 (change=-0.14633318304645848 %)
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | right removable region: 108
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | sum of square deviations: 459366752.5
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | sum of deviations: -5791839864.5
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | mean x: 1772979256.5
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | mean y: 2334321.3771929825
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | intersect: 22356611989.15044
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | chi2: 0.813519011273819
[2026-03-08 16:12:41] 2026-03-08 15:12:00,372 | INFO     | current chi2=0.813519011273819 (change=57.20899966315114 %)
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | sum of square deviations: 401533110.0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | sum of deviations: -5774631551.0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | mean x: 1772979409.0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | mean y: 2334268.4495412842
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | intersect: 25500363147.02629
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | chi2: 0.814337029948579
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | current chi2=0.814337029948579 (change=-0.10055311104275148 %)
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | left removable region: 20
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | sum of square deviations: 211285822.0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | sum of deviations: 496985056.0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | mean x: 1772979378.5
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | mean y: 2353147.8181818184
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | intersect: -4168036740.95849
[2026-03-08 16:12:41] 2026-03-08 15:12:00,373 | INFO     | chi2: 0.0001751601531830584
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | current memory leak: 2.35 B/s (using 88 data points, chi2=0.00)
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | could have reported an average CPU frequency of 3571 MHz (8 samples)
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | ..............................
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | . Timing measurements:
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | . get job = 0 s
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | . initial setup = 5 s
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | . payload setup = 5 s
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | . stage-in = 0 s
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | . payload execution = 7212 s
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | . stage-out = 0 s
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | . log creation = 0 s
[2026-03-08 16:12:41] 2026-03-08 15:12:00,374 | INFO     | ..............................
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | 
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | job summary report
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | --------------------------------------------------
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | PanDA job id: 7045343694
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | task id: 48997926
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | errors: (none)
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | pilot state: finished 
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | transexitcode: 0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | exeerrorcode: 0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | exeerrordiag: 
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | exitcode: 0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | exitmsg: OK
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | cpuconsumptiontime: 27698 s
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | nevents: 400
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | neventsw: 0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,735 | INFO     | pid: 1319919
[2026-03-08 16:12:41] 2026-03-08 15:12:00,736 | INFO     | pgrp: 1319919
[2026-03-08 16:12:41] 2026-03-08 15:12:00,736 | INFO     | corecount: 4
[2026-03-08 16:12:41] 2026-03-08 15:12:00,736 | INFO     | event service: False
[2026-03-08 16:12:41] 2026-03-08 15:12:00,736 | INFO     | sizes: {0: 2295850, 11: 2295850, 7221: 2332199, 7224: 2332199, 7226: 2332393}
[2026-03-08 16:12:41] 2026-03-08 15:12:00,736 | INFO     | --------------------------------------------------
[2026-03-08 16:12:41] 2026-03-08 15:12:00,736 | INFO     | 
[2026-03-08 16:12:41] 2026-03-08 15:12:00,736 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,757 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 16:12:41] 2026-03-08 15:12:00,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,757 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 16:12:41] 2026-03-08 15:12:00,757 | INFO     | job 7045343694 has completed (purged errors)
[2026-03-08 16:12:41] 2026-03-08 15:12:00,757 | INFO     | overall cleanup function is called
[2026-03-08 16:12:41] 2026-03-08 15:12:01,766 | INFO     | --- collectZombieJob: --- 10, [1319919]
[2026-03-08 16:12:41] 2026-03-08 15:12:01,766 | INFO     | zombie collector waiting for pid 1319919
[2026-03-08 16:12:41] 2026-03-08 15:12:01,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 16:12:41] 2026-03-08 15:12:01,766 | INFO     | collected zombie processes
[2026-03-08 16:12:41] 2026-03-08 15:12:01,766 | INFO     | will attempt to kill all subprocesses of pid=1319919
[2026-03-08 16:12:41] 2026-03-08 15:12:02,248 | WARNING  | process 1319919 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 16:12:41] 2026-03-08 15:12:02,947 | INFO     | process IDs to be killed: [1319919] (in reverse order)
[2026-03-08 16:12:41] 2026-03-08 15:12:02,985 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 16:12:41] 2026-03-08 15:12:02,986 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 16:12:41] 2026-03-08 15:12:02,986 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-08 16:12:41] 2026-03-08 15:12:02,986 | WARNING  | maxPSS not found in memory monitor output
[2026-03-08 16:12:41] 2026-03-08 15:12:02,986 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7045343694/payload.stdout) since it has not been created yet
[2026-03-08 16:12:41] 2026-03-08 15:12:02,986 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-08 16:12:41] 2026-03-08 15:12:03,002 | INFO     | sufficient remaining disk space (20259536896 B)
[2026-03-08 16:12:41] 2026-03-08 15:12:03,002 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-08 16:12:41] 2026-03-08 15:12:03,002 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7045343694/HITS.48997926._000547.pool.root.1 since it does not exist
[2026-03-08 16:12:41] 2026-03-08 15:12:03,191 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 16:12:41] 2026-03-08 15:12:03,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 16:12:41] 2026-03-08 15:12:03,275 | INFO     | did not find any defunct processes belonging to 1319919
[2026-03-08 16:12:41] 2026-03-08 15:12:03,320 | INFO     | did not find any defunct processes belonging to 1319919
[2026-03-08 16:12:41] 2026-03-08 15:12:03,320 | INFO     | ready for new job
[2026-03-08 16:12:41] 2026-03-08 15:12:03,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 16:12:41] 2026-03-08 15:12:03,322 | INFO     | **************************************
[2026-03-08 16:12:41] 2026-03-08 15:12:03,322 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 16:12:41] 2026-03-08 15:12:03,322 | INFO     | **************************************
[2026-03-08 16:12:41] 2026-03-08 15:12:03,322 | INFO     | 
[2026-03-08 16:12:41] 2026-03-08 15:12:03,328 | INFO     | architecture information:
[2026-03-08 16:12:41] 2026-03-08 15:12:03,331 | INFO     | executing command: cat /etc/os-release
[2026-03-08 16:12:41] 2026-03-08 15:12:03,345 | INFO     | cat /etc/os-release:
[2026-03-08 16:12:41] NAME="CentOS Linux"
[2026-03-08 16:12:41] VERSION="7 (Core)"
[2026-03-08 16:12:41] ID="centos"
[2026-03-08 16:12:41] ID_LIKE="rhel fedora"
[2026-03-08 16:12:41] VERSION_ID="7"
[2026-03-08 16:12:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 16:12:41] ANSI_COLOR="0;31"
[2026-03-08 16:12:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 16:12:41] HOME_URL="https://www.centos.org/"
[2026-03-08 16:12:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 16:12:41] 
[2026-03-08 16:12:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 16:12:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 16:12:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 16:12:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 16:12:41] 
[2026-03-08 16:12:41] 2026-03-08 15:12:03,346 | INFO     | **************************************
[2026-03-08 16:12:41] 2026-03-08 15:12:03,583 | INFO     | number of running child processes to parent process 1319919: 1
[2026-03-08 16:12:41] 2026-03-08 15:12:03,583 | INFO     | maximum number of monitored processes: 6
[2026-03-08 16:12:41] 2026-03-08 15:12:03,583 | INFO     | aborting job monitoring since job object (job id=7045343694) has expired
[2026-03-08 16:12:41] 2026-03-08 15:12:03,848 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-08 16:12:41] 2026-03-08 15:12:03,863 | INFO     | sufficient remaining disk space (20256391168 B)
[2026-03-08 16:12:41] 2026-03-08 15:12:03,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 16:12:41] 2026-03-08 15:12:03,863 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 16:12:41] 2026-03-08 15:12:03,863 | INFO     | update_server=False
[2026-03-08 16:12:41] 2026-03-08 15:12:03,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 16:12:41] 2026-03-08 15:12:03,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 16:12:41] 2026-03-08 15:12:03,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 16:12:41] 2026-03-08 15:12:03,864 | INFO     | will abort loop
[2026-03-08 16:12:41] 2026-03-08 15:12:03,873 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 16:12:41] 2026-03-08 15:12:04,617 | INFO     | all job control threads have been joined
[2026-03-08 16:12:41] 2026-03-08 15:12:04,825 | INFO     | all data control threads have been joined
[2026-03-08 16:12:41] 2026-03-08 15:12:04,869 | INFO     | [job] retrieve thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:04,869 | INFO     | [job] job monitor thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:04,911 | INFO     | all payload control threads have been joined
[2026-03-08 16:12:41] 2026-03-08 15:12:05,040 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:05,044 | INFO     | [data] copytool_in thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:05,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 16:12:41] 2026-03-08 15:12:05,622 | INFO     | [job] control thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:05,765 | INFO     | [payload] validate_post thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:05,829 | INFO     | [job] validate thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:05,831 | INFO     | [data] control thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:05,870 | INFO     | [data] copytool_out thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:05,916 | INFO     | [payload] control thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:06,270 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:06,336 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:06,375 | INFO     | [payload] failed_post thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:06,440 | INFO     | [job] queue monitor thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:07,880 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:14,334 | INFO     | job.realtimelogging is not enabled
[2026-03-08 16:12:41] 2026-03-08 15:12:15,339 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 16:12:41] 2026-03-08 15:12:33,077 | INFO     | PID=1313409 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 16:12:41] 2026-03-08 15:12:33,078 | INFO     | .. there are 47 such processes running
[2026-03-08 16:12:41] 2026-03-08 15:12:33,078 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 16:12:41] 2026-03-08 15:12:33,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 16:12:41] 2026-03-08 15:12:33,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 16:12:41] 2026-03-08 15:12:34,560 | INFO     | [monitor] cgroup control has ended
[2026-03-08 16:12:41] 2026-03-08 15:12:35,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22820378486592)>', '<ExcThread(monitor, started 22820139841280)>']
[2026-03-08 16:12:41] 2026-03-08 15:12:36,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 16:12:41] 2026-03-08 15:12:36,096 | INFO     | [monitor] control thread has ended
[2026-03-08 16:12:41] 2026-03-08 15:12:40,705 | INFO     | all workflow threads have been joined
[2026-03-08 16:12:41] 2026-03-08 15:12:40,705 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 16:12:41] 2026-03-08 15:12:40,706 | INFO     | traces error code: 0
[2026-03-08 16:12:41] 2026-03-08 15:12:40,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 16:12:41] 2026-03-08 15:12:40,915 [wrapper] ==== pilot stdout END ====
[2026-03-08 16:12:41] 2026-03-08 15:12:40,916 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 16:12:41] 2026-03-08 15:12:40,918 [wrapper] pilotpid: 1313409
[2026-03-08 16:12:41] 2026-03-08 15:12:40,919 [wrapper] Pilot exit status: 0
[2026-03-08 16:12:41] 2026-03-08 15:12:40,928 [wrapper] pandaids: 7045343694
[2026-03-08 16:12:41] 2026-03-08 15:12:41,064 [wrapper] cleanup supervisor_pilot 2347131 1313410
[2026-03-08 16:12:41] 2026-03-08 15:12:41,065 [wrapper] Test setup, not cleaning
[2026-03-08 16:12:41] 2026-03-08 15:12:41,067 [wrapper] apfmon messages muted
[2026-03-08 16:12:41] 2026-03-08 15:12:41,068 [wrapper] ==== wrapper stdout END ====
[2026-03-08 16:12:41] 2026-03-08 15:12:41,070 [wrapper] ==== wrapper stderr END ====
[2026-03-08 16:12:41]  *** Error codes and diagnostics ***
[2026-03-08 16:12:41]     "exeErrorCode": 0,
[2026-03-08 16:12:41]     "exeErrorDiag": "",
[2026-03-08 16:12:41]     "pilotErrorCode": 0,
[2026-03-08 16:12:41]     "pilotErrorDiag": "",
[2026-03-08 16:12:41]  *** Listing of results directory ***
[2026-03-08 16:12:41] total 603924
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc    584627 Mar  7 19:09 pilot3.tar.gz
[2026-03-08 16:12:41] -rwx------. 1 boinc boinc     36322 Mar  7 19:10 runpilot2-wrapper.sh
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc      5111 Mar  7 19:12 queuedata.json
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc       100 Mar  8 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 16:12:41] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 14:11 run_atlas
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc       105 Mar  8 14:11 job.xml
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc      6707 Mar  8 14:11 init_data.xml
[2026-03-08 16:12:41] -rw-r--r--. 2 boinc boinc 346165027 Mar  8 14:11 EVNT.48997924._000022.pool.root.1
[2026-03-08 16:12:41] -rw-r--r--. 2 boinc boinc     15845 Mar  8 14:11 start_atlas.sh
[2026-03-08 16:12:41] drwxrwx--x. 2 boinc boinc      4096 Mar  8 14:11 shared
[2026-03-08 16:12:41] -rw-r--r--. 2 boinc boinc    597957 Mar  8 14:11 input.tar.gz
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc         0 Mar  8 14:11 boinc_lockfile
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc      2585 Mar  8 14:11 pandaJob.out
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc    999177 Mar  8 14:11 agis_schedconf.cvmfs.json
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc   1521291 Mar  8 14:11 agis_ddmendpoints.agis.ALL.json
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc       444 Mar  8 14:11 workernode_map.json
[2026-03-08 16:12:41] drwx------. 5 boinc boinc      4096 Mar  8 14:11 pilot3
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc 265611368 Mar  8 16:11 HITS.48997926._000547.pool.root.1
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc       529 Mar  8 16:11 boinc_task_state.xml
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc      1031 Mar  8 16:11 memory_monitor_summary.json
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc    313652 Mar  8 16:11 log.48997926._000547.job.log.tgz.1
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc      6350 Mar  8 16:12 heartbeat.json
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc        27 Mar  8 16:12 wrapper_checkpoint.txt
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc      8192 Mar  8 16:12 boinc_mmap_file
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc        95 Mar  8 16:12 pilot_heartbeat.json
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc      5192 Mar  8 16:12 pilotlog.txt
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc   1038233 Mar  8 16:12 log.48997926._000547.job.log.1
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc       357 Mar  8 16:12 output.list
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc       620 Mar  8 16:12 runtime_log
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc   1372160 Mar  8 16:12 result.tar.gz
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc      9221 Mar  8 16:12 runtime_log.err
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc       663 Mar  8 16:12 KXvMDm5HBJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYOULDmw5hYcm.diag
[2026-03-08 16:12:41] -rw-r--r--. 1 boinc boinc     21247 Mar  8 16:12 stderr.txt
[2026-03-08 16:12:41] HITS file was successfully produced:
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc 265611368 Mar  8 16:11 shared/HITS.pool.root.1
[2026-03-08 16:12:41]  *** Contents of shared directory: ***
[2026-03-08 16:12:41] total 599388
[2026-03-08 16:12:41] -rw-r--r--. 2 boinc boinc 346165027 Mar  8 14:11 ATLAS.root_0
[2026-03-08 16:12:41] -rw-r--r--. 2 boinc boinc     15845 Mar  8 14:11 start_atlas.sh
[2026-03-08 16:12:41] -rw-r--r--. 2 boinc boinc    597957 Mar  8 14:11 input.tar.gz
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc 265611368 Mar  8 16:11 HITS.pool.root.1
[2026-03-08 16:12:41] -rw-------. 1 boinc boinc   1372160 Mar  8 16:12 result.tar.gz
16:12:42 (1308705): run_atlas exited; CPU time 28027.243296
16:12:42 (1308705): called boinc_finish(0)

</stderr_txt>
]]>

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