Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:40:59 (702023): wrapper (7.7.26015): starting
05:40:59 (702023): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 05:40:59] Arguments: --nthreads 8
[2026-03-08 05:40:59] Threads: 8
[2026-03-08 05:40:59] Checking for CVMFS
[2026-03-08 05:40:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 05:40:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 05:40:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 05:41:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 05:41:00] 2.13.3.0 11585 106230 248476 157034 0 546 26940082 40960001 30722 16776704 0 349457749 99.640 323834206 35515 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-08 05:41:00] CVMFS is ok
[2026-03-08 05:41:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 05:41:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 05:41:00] Further information can be found at the LHC@home message board.
[2026-03-08 05:41:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 05:41:00] Checking for apptainer binary...
[2026-03-08 05:41:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 05:41:00] Running /usr/bin/apptainer --version
[2026-03-08 05:41:00] apptainer version 1.4.5-2.el9
[2026-03-08 05:41:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 05:41:00] c-212-9.aglt2.org
[2026-03-08 05:41:00] apptainer works
[2026-03-08 05:41:00] Set ATHENA_PROC_NUMBER=8
[2026-03-08 05:41:00] Set ATHENA_CORE_NUMBER=8
[2026-03-08 05:41:00] Starting ATLAS job with PandaID=7045869023
[2026-03-08 05:41:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 08:35:52]  *** The last 200 lines of the pilot log: ***
[2026-03-08 08:35:52] 2026-03-08 12:35:15,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 08:35:52] 2026-03-08 12:35:15,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 08:35:52] 2026-03-08 12:35:15,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 08:35:52] 2026-03-08 12:35:15,180 | INFO     | fitting pss+swap vs Time
[2026-03-08 08:35:52] 2026-03-08 12:35:15,196 | INFO     | sum of square deviations: 1550429070.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,197 | INFO     | sum of deviations: 234815656.99999428
[2026-03-08 08:35:52] 2026-03-08 12:35:15,197 | INFO     | mean x: 1772968092.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,197 | INFO     | mean y: 2501538.3918128656
[2026-03-08 08:35:52] 2026-03-08 12:35:15,197 | INFO     | intersect: -266018109.11647743
[2026-03-08 08:35:52] 2026-03-08 12:35:15,197 | INFO     | chi2: 2.8878972189346706
[2026-03-08 08:35:52] 2026-03-08 12:35:15,197 | INFO     | sum of square deviations: 1418361477.5
[2026-03-08 08:35:52] 2026-03-08 12:35:15,198 | INFO     | sum of deviations: 21417838679.499992
[2026-03-08 08:35:52] 2026-03-08 12:35:15,198 | INFO     | mean x: 1772967939.5
[2026-03-08 08:35:52] 2026-03-08 12:35:15,198 | INFO     | mean y: 2525556.1626506024
[2026-03-08 08:35:52] 2026-03-08 12:35:15,198 | INFO     | intersect: -26770015798.434666
[2026-03-08 08:35:52] 2026-03-08 12:35:15,199 | INFO     | chi2: 1.5036365509617902
[2026-03-08 08:35:52] 2026-03-08 12:35:15,199 | INFO     | current chi2=1.5036365509617902 (change=47.93316946658949 %)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,199 | INFO     | sum of square deviations: 1294014960.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,200 | INFO     | sum of deviations: 20678893311.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,200 | INFO     | mean x: 1772967787.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,200 | INFO     | mean y: 2524649.6273291926
[2026-03-08 08:35:52] 2026-03-08 12:35:15,200 | INFO     | intersect: -28330232578.475174
[2026-03-08 08:35:52] 2026-03-08 12:35:15,200 | INFO     | chi2: 1.5050130988220987
[2026-03-08 08:35:52] 2026-03-08 12:35:15,200 | INFO     | current chi2=1.5050130988220987 (change=-0.09154791158993827 %)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,200 | INFO     | right removable region: 160
[2026-03-08 08:35:52] 2026-03-08 12:35:15,201 | INFO     | sum of square deviations: 1418361477.5
[2026-03-08 08:35:52] 2026-03-08 12:35:15,202 | INFO     | sum of deviations: -26737482668.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,212 | INFO     | mean x: 1772968244.5
[2026-03-08 08:35:52] 2026-03-08 12:35:15,212 | INFO     | mean y: 2532315.204819277
[2026-03-08 08:35:52] 2026-03-08 12:35:15,213 | INFO     | intersect: 33424694761.26091
[2026-03-08 08:35:52] 2026-03-08 12:35:15,213 | INFO     | chi2: 1.4814586010030013
[2026-03-08 08:35:52] 2026-03-08 12:35:15,213 | INFO     | current chi2=1.4814586010030013 (change=48.701131352953645 %)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,213 | INFO     | sum of square deviations: 1294014960.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,214 | INFO     | sum of deviations: -28957329520.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,214 | INFO     | mean x: 1772968397.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,214 | INFO     | mean y: 2534971.217391304
[2026-03-08 08:35:52] 2026-03-08 12:35:15,214 | INFO     | intersect: 39677833702.28861
[2026-03-08 08:35:52] 2026-03-08 12:35:15,214 | INFO     | chi2: 1.4527605623557687
[2026-03-08 08:35:52] 2026-03-08 12:35:15,215 | INFO     | current chi2=1.4527605623557687 (change=1.9371475266202527 %)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,215 | INFO     | left removable region: 20
[2026-03-08 08:35:52] 2026-03-08 12:35:15,215 | INFO     | sum of square deviations: 850825255.0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,215 | INFO     | sum of deviations: -5343093090.000001
[2026-03-08 08:35:52] 2026-03-08 12:35:15,216 | INFO     | mean x: 1772968366.5
[2026-03-08 08:35:52] 2026-03-08 12:35:15,216 | INFO     | mean y: 2557715.4571428574
[2026-03-08 08:35:52] 2026-03-08 12:35:15,216 | INFO     | intersect: 11136612531.254473
[2026-03-08 08:35:52] 2026-03-08 12:35:15,216 | INFO     | chi2: 0.025369668521382466
[2026-03-08 08:35:52] 2026-03-08 12:35:15,216 | INFO     | current memory leak: -6.28 B/s (using 140 data points, chi2=0.03)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | could have reported an average CPU frequency of 3159 MHz (9 samples)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | ..............................
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | . Timing measurements:
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | . get job = 0 s
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | . initial setup = 11 s
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | . payload setup = 10 s
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | . stage-in = 0 s
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | . payload execution = 10409 s
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | . stage-out = 2 s
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | . log creation = 0 s
[2026-03-08 08:35:52] 2026-03-08 12:35:15,217 | INFO     | ..............................
[2026-03-08 08:35:52] 2026-03-08 12:35:15,548 | INFO     | 
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | job summary report
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | --------------------------------------------------
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | PanDA job id: 7045869023
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | task id: 48997926
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | errors: (none)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | pilot state: finished 
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | transexitcode: 0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | exeerrorcode: 0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | exeerrordiag: 
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | exitcode: 0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | exitmsg: OK
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | cpuconsumptiontime: 45147 s
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | nevents: 400
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | neventsw: 0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | pid: 710438
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | pgrp: 710438
[2026-03-08 08:35:52] 2026-03-08 12:35:15,549 | INFO     | corecount: 8
[2026-03-08 08:35:52] 2026-03-08 12:35:15,550 | INFO     | event service: False
[2026-03-08 08:35:52] 2026-03-08 12:35:15,550 | INFO     | sizes: {0: 2294751, 1: 2295869, 2: 2295869, 10423: 2324799, 10426: 2333853, 10427: 2334055}
[2026-03-08 08:35:52] 2026-03-08 12:35:15,550 | INFO     | --------------------------------------------------
[2026-03-08 08:35:52] 2026-03-08 12:35:15,550 | INFO     | 
[2026-03-08 08:35:52] 2026-03-08 12:35:15,550 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-08 08:35:52] 2026-03-08 12:35:15,652 | WARNING  | process 710438 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 08:35:52] 2026-03-08 12:35:15,653 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045869023/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,720 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,721 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,721 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,721 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 08:35:52] 2026-03-08 12:35:15,722 | INFO     | job 7045869023 has completed (purged errors)
[2026-03-08 08:35:52] 2026-03-08 12:35:15,723 | INFO     | overall cleanup function is called
[2026-03-08 08:35:52] 2026-03-08 12:35:16,223 | INFO     | number of running child processes to parent process 710438: 1
[2026-03-08 08:35:52] 2026-03-08 12:35:16,223 | INFO     | maximum number of monitored processes: 6
[2026-03-08 08:35:52] 2026-03-08 12:35:16,223 | INFO     | aborting job monitoring since job object (job id=7045869023) has expired
[2026-03-08 08:35:52] 2026-03-08 12:35:16,737 | INFO     | --- collectZombieJob: --- 10, [710438]
[2026-03-08 08:35:52] 2026-03-08 12:35:16,737 | INFO     | zombie collector waiting for pid 710438
[2026-03-08 08:35:52] 2026-03-08 12:35:16,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 08:35:52] 2026-03-08 12:35:16,737 | INFO     | collected zombie processes
[2026-03-08 08:35:52] 2026-03-08 12:35:16,737 | INFO     | will attempt to kill all subprocesses of pid=710438
[2026-03-08 08:35:52] 2026-03-08 12:35:17,803 | INFO     | process IDs to be killed: [710438] (in reverse order)
[2026-03-08 08:35:52] 2026-03-08 12:35:17,968 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 08:35:52] 2026-03-08 12:35:17,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 08:35:52] 2026-03-08 12:35:18,009 | INFO     | did not find any defunct processes belonging to 710438
[2026-03-08 08:35:52] 2026-03-08 12:35:18,028 | INFO     | did not find any defunct processes belonging to 710438
[2026-03-08 08:35:52] 2026-03-08 12:35:18,028 | INFO     | ready for new job
[2026-03-08 08:35:52] 2026-03-08 12:35:18,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 08:35:52] 2026-03-08 12:35:18,030 | INFO     | **************************************
[2026-03-08 08:35:52] 2026-03-08 12:35:18,031 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 08:35:52] 2026-03-08 12:35:18,031 | INFO     | **************************************
[2026-03-08 08:35:52] 2026-03-08 12:35:18,031 | INFO     | 
[2026-03-08 08:35:52] 2026-03-08 12:35:18,035 | INFO     | architecture information:
[2026-03-08 08:35:52] 2026-03-08 12:35:18,036 | INFO     | executing command: cat /etc/os-release
[2026-03-08 08:35:52] 2026-03-08 12:35:18,072 | INFO     | cat /etc/os-release:
[2026-03-08 08:35:52] NAME="CentOS Linux"
[2026-03-08 08:35:52] VERSION="7 (Core)"
[2026-03-08 08:35:52] ID="centos"
[2026-03-08 08:35:52] ID_LIKE="rhel fedora"
[2026-03-08 08:35:52] VERSION_ID="7"
[2026-03-08 08:35:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 08:35:52] ANSI_COLOR="0;31"
[2026-03-08 08:35:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 08:35:52] HOME_URL="https://www.centos.org/"
[2026-03-08 08:35:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 08:35:52] 
[2026-03-08 08:35:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 08:35:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 08:35:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 08:35:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 08:35:52] 
[2026-03-08 08:35:52] 2026-03-08 12:35:18,072 | INFO     | **************************************
[2026-03-08 08:35:52] 2026-03-08 12:35:18,575 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-08 08:35:52] 2026-03-08 12:35:18,701 | INFO     | sufficient remaining disk space (126676369408 B)
[2026-03-08 08:35:52] 2026-03-08 12:35:18,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 08:35:52] 2026-03-08 12:35:18,701 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 08:35:52] 2026-03-08 12:35:18,701 | INFO     | update_server=False
[2026-03-08 08:35:52] 2026-03-08 12:35:18,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 08:35:52] 2026-03-08 12:35:18,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 08:35:52] 2026-03-08 12:35:18,748 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-08 08:35:52] 2026-03-08 12:35:18,749 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-08 08:35:52] 2026-03-08 12:35:18,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 08:35:52] 2026-03-08 12:35:18,749 | INFO     | will abort loop
[2026-03-08 08:35:52] 2026-03-08 12:35:19,511 | INFO     | all data control threads have been joined
[2026-03-08 08:35:52] 2026-03-08 12:35:19,707 | INFO     | [job] retrieve thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:19,754 | INFO     | [job] job monitor thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:19,933 | INFO     | [job] validate thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:19,937 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:20,122 | INFO     | all payload control threads have been joined
[2026-03-08 08:35:52] 2026-03-08 12:35:20,226 | INFO     | all job control threads have been joined
[2026-03-08 08:35:52] 2026-03-08 12:35:20,241 | INFO     | [data] copytool_in thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:20,294 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:20,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 08:35:52] 2026-03-08 12:35:20,515 | INFO     | [data] control thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:20,560 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:20,669 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:20,708 | INFO     | [data] copytool_out thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:21,128 | INFO     | [payload] control thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:21,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 08:35:52] 2026-03-08 12:35:21,232 | INFO     | [job] control thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:21,279 | INFO     | [payload] failed_post thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:21,283 | INFO     | [payload] validate_post thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:21,340 | INFO     | [job] queue monitor thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:25,149 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 08:35:52] 2026-03-08 12:35:44,948 | INFO     | [monitor] cgroup control has ended
[2026-03-08 08:35:52] 2026-03-08 12:35:46,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503089502016)>', '<ExcThread(monitor, started 140502733154048)>']
[2026-03-08 08:35:52] 2026-03-08 12:35:48,107 | INFO     | PID=705771 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 08:35:52] 2026-03-08 12:35:48,107 | INFO     | .. there are 35 such processes running
[2026-03-08 08:35:52] 2026-03-08 12:35:48,108 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 08:35:52] 2026-03-08 12:35:48,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 08:35:52] 2026-03-08 12:35:48,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 08:35:52] 2026-03-08 12:35:48,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 08:35:52] 2026-03-08 12:35:48,108 | INFO     | [monitor] control thread has ended
[2026-03-08 08:35:52] 2026-03-08 12:35:51,634 | INFO     | all workflow threads have been joined
[2026-03-08 08:35:52] 2026-03-08 12:35:51,635 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 08:35:52] 2026-03-08 12:35:51,635 | INFO     | traces error code: 0
[2026-03-08 08:35:52] 2026-03-08 12:35:51,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 08:35:52] 2026-03-08 12:35:51,815 [wrapper] ==== pilot stdout END ====
[2026-03-08 08:35:52] 2026-03-08 12:35:51,825 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 08:35:52] 2026-03-08 12:35:51,828 [wrapper] pilotpid: 705771
[2026-03-08 08:35:52] 2026-03-08 12:35:51,830 [wrapper] Pilot exit status: 0
[2026-03-08 08:35:52] 2026-03-08 12:35:51,842 [wrapper] pandaids: 7045869023
[2026-03-08 08:35:52] 2026-03-08 12:35:52,038 [wrapper] cleanup supervisor_pilot 1589744 705772
[2026-03-08 08:35:52] 2026-03-08 12:35:52,046 [wrapper] Test setup, not cleaning
[2026-03-08 08:35:52] 2026-03-08 12:35:52,048 [wrapper] apfmon messages muted
[2026-03-08 08:35:52] 2026-03-08 12:35:52,051 [wrapper] ==== wrapper stdout END ====
[2026-03-08 08:35:52] 2026-03-08 12:35:52,053 [wrapper] ==== wrapper stderr END ====
[2026-03-08 08:35:52]  *** Error codes and diagnostics ***
[2026-03-08 08:35:52]     "exeErrorCode": 0,
[2026-03-08 08:35:52]     "exeErrorDiag": "",
[2026-03-08 08:35:52]     "pilotErrorCode": 0,
[2026-03-08 08:35:52]     "pilotErrorDiag": "",
[2026-03-08 08:35:52]  *** Listing of results directory ***
[2026-03-08 08:35:52] total 593144
[2026-03-08 08:35:52] -rwx------. 1 boincer umatlas     36322 Mar  8 00:00 runpilot2-wrapper.sh
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas      5111 Mar  8 00:00 queuedata.json
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas    584627 Mar  8 00:00 pilot3.tar.gz
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas       100 Mar  8 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 08:35:52] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 05:40 run_atlas
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas       105 Mar  8 05:40 job.xml
[2026-03-08 08:35:52] -rw-r--r--. 2 boincer umatlas 338442890 Mar  8 05:40 EVNT.48997924._000067.pool.root.1
[2026-03-08 08:35:52] -rw-r--r--. 2 boincer umatlas    597952 Mar  8 05:40 input.tar.gz
[2026-03-08 08:35:52] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 05:40 start_atlas.sh
[2026-03-08 08:35:52] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 05:40 shared
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas         0 Mar  8 05:40 boinc_lockfile
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas      2586 Mar  8 05:41 pandaJob.out
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas        57 Mar  8 05:41 setup.sh.local
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas    999169 Mar  8 05:41 agis_schedconf.cvmfs.json
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas   1521291 Mar  8 05:41 agis_ddmendpoints.agis.ALL.json
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas       429 Mar  8 05:41 workernode_map.json
[2026-03-08 08:35:52] drwx------. 5 boincer umatlas      4096 Mar  8 05:41 pilot3
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas      6958 Mar  8 08:28 init_data.xml
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas 261444778 Mar  8 08:33 HITS.48997926._001681.pool.root.1
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas       529 Mar  8 08:33 boinc_task_state.xml
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas        95 Mar  8 08:34 pilot_heartbeat.json
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas      1059 Mar  8 08:35 memory_monitor_summary.json
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas    408219 Mar  8 08:35 log.48997926._001681.job.log.tgz.1
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas      6354 Mar  8 08:35 heartbeat.json
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas        27 Mar  8 08:35 wrapper_checkpoint.txt
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 08:35 boinc_mmap_file
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas      5006 Mar  8 08:35 pilotlog.txt
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas   1365968 Mar  8 08:35 log.48997926._001681.job.log.1
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas       357 Mar  8 08:35 output.list
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas       620 Mar  8 08:35 runtime_log
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas   1792000 Mar  8 08:35 result.tar.gz
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas      9337 Mar  8 08:35 runtime_log.err
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas       657 Mar  8 08:35 dE4LDmDRLJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmghVLDm7IB4Yn.diag
[2026-03-08 08:35:52] -rw-r--r--. 1 boincer umatlas     21108 Mar  8 08:35 stderr.txt
[2026-03-08 08:35:52] HITS file was successfully produced:
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas 261444778 Mar  8 08:33 shared/HITS.pool.root.1
[2026-03-08 08:35:52]  *** Contents of shared directory: ***
[2026-03-08 08:35:52] total 588192
[2026-03-08 08:35:52] -rw-r--r--. 2 boincer umatlas 338442890 Mar  8 05:40 ATLAS.root_0
[2026-03-08 08:35:52] -rw-r--r--. 2 boincer umatlas    597952 Mar  8 05:40 input.tar.gz
[2026-03-08 08:35:52] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 05:40 start_atlas.sh
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas 261444778 Mar  8 08:33 HITS.pool.root.1
[2026-03-08 08:35:52] -rw-------. 1 boincer umatlas   1792000 Mar  8 08:35 result.tar.gz
08:35:54 (702023): run_atlas exited; CPU time 45567.879036
08:35:54 (702023): called boinc_finish(0)

</stderr_txt>
]]>

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