Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:12:11 (2830593): wrapper (7.7.26015): starting
22:12:11 (2830593): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 22:12:11] Arguments: --nthreads 4
[2026-03-09 22:12:11] Threads: 4
[2026-03-09 22:12:11] Checking for CVMFS
[2026-03-09 22:12:11] No cvmfs_config command found, will try listing directly
[2026-03-09 22:12:11] CVMFS is ok
[2026-03-09 22:12:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 22:12:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 22:12:11] Further information can be found at the LHC@home message board.
[2026-03-09 22:12:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 22:12:11] Checking for apptainer binary...
[2026-03-09 22:12:11] which: no apptainer in ((null))
[2026-03-09 22:12:11] apptainer is not installed, using version from CVMFS
[2026-03-09 22:12:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 22:12:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-09 22:12:11] apptainer works
[2026-03-09 22:12:11] Set ATHENA_PROC_NUMBER=4
[2026-03-09 22:12:11] Set ATHENA_CORE_NUMBER=4
[2026-03-09 22:12:11] Starting ATLAS job with PandaID=7045814073
[2026-03-09 22:12:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 23:58:36]  *** The last 200 lines of the pilot log: ***
[2026-03-09 23:58:36] 2026-03-09 22:57:45,598 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2376257/.job.ad'
[2026-03-09 23:58:36] 2026-03-09 22:57:45,598 | INFO     | total number of processed events: 400 (read)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,616 | INFO     | using path: /var/lib/boinc/var/slot68/slots/5/PanDA_Pilot-7045814073/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,616 | INFO     | extracted standard info from prmon json
[2026-03-09 23:58:36] 2026-03-09 22:57:45,616 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 23:58:36] 2026-03-09 22:57:45,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 23:58:36] 2026-03-09 22:57:45,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 23:58:36] 2026-03-09 22:57:45,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 23:58:36] 2026-03-09 22:57:45,618 | INFO     | fitting pss+swap vs Time
[2026-03-09 23:58:36] 2026-03-09 22:57:45,618 | INFO     | sum of square deviations: 348769330.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,618 | INFO     | sum of deviations: 4874113896.499999
[2026-03-09 23:58:36] 2026-03-09 22:57:45,618 | INFO     | mean x: 1773093901.5
[2026-03-09 23:58:36] 2026-03-09 22:57:45,618 | INFO     | mean y: 2292340.394230769
[2026-03-09 23:58:36] 2026-03-09 22:57:45,618 | INFO     | intersect: -24777012723.788307
[2026-03-09 23:58:36] 2026-03-09 22:57:45,618 | INFO     | chi2: 1.9409633584787314
[2026-03-09 23:58:36] 2026-03-09 22:57:45,618 | INFO     | sum of square deviations: 300842850.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | sum of deviations: 10990529271.000002
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | mean x: 1773093749.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | mean y: 2310987.515151515
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | intersect: -64773164808.60774
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | chi2: 1.1198812065960841
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | current chi2=1.1198812065960841 (change=42.30281567634469 %)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | sum of square deviations: 257521107.5
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | sum of deviations: 10395982340.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | mean x: 1773093596.5
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | mean y: 2308892.829787234
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | intersect: -71576482823.8107
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | chi2: 1.1215872973556298
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | current chi2=1.1215872973556298 (change=-0.15234569073012316 %)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | right removable region: 93
[2026-03-09 23:58:36] 2026-03-09 22:57:45,619 | INFO     | sum of square deviations: 300842850.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | sum of deviations: -5109614919.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | mean x: 1773094054.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | mean y: 2323131.9494949495
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | intersect: 30117141653.00988
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | chi2: 0.8548791077979128
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | current chi2=0.8548791077979128 (change=55.955937856140615 %)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | sum of square deviations: 257521107.5
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | sum of deviations: -5325669355.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | mean x: 1773094206.5
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | mean y: 2323877.2978723403
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | intersect: 36670826784.71525
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | chi2: 0.8553732799009746
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | current chi2=0.8553732799009746 (change=-0.05780608024621594 %)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,620 | INFO     | left removable region: 20
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | sum of square deviations: 120605052.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | sum of deviations: 246911590.99999988
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | mean x: 1773094176.0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | mean y: 2348038.479452055
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | intersect: -3627661623.0477767
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | chi2: 3.2869386336657544e-05
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | current memory leak: 2.05 B/s (using 73 data points, chi2=0.00)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | could have reported an average CPU frequency of 3638 MHz (7 samples)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | ..............................
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | . Timing measurements:
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | . get job = 0 s
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | . initial setup = 4 s
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | . payload setup = 3 s
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | . stage-in = 0 s
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | . payload execution = 6299 s
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | . stage-out = 0 s
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | . log creation = 0 s
[2026-03-09 23:58:36] 2026-03-09 22:57:45,621 | INFO     | ..............................
[2026-03-09 23:58:36] 2026-03-09 22:57:45,671 | INFO     | 
[2026-03-09 23:58:36] 2026-03-09 22:57:45,671 | INFO     | job summary report
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | --------------------------------------------------
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | PanDA job id: 7045814073
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | task id: 48997948
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | errors: (none)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | pilot state: finished 
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | transexitcode: 0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | exeerrorcode: 0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | exeerrordiag: 
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | exitcode: 0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | exitmsg: OK
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | cpuconsumptiontime: 24355 s
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | nevents: 400
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | neventsw: 0
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | pid: 2848107
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | pgrp: 2848107
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | corecount: 4
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | event service: False
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | sizes: {0: 2279996, 1: 2280258, 11: 2280286, 6307: 2316200, 6311: 2316200, 6313: 2316394}
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | --------------------------------------------------
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | 
[2026-03-09 23:58:36] 2026-03-09 22:57:45,672 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/5
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,693 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 23:58:36] 2026-03-09 22:57:45,693 | INFO     | job 7045814073 has completed (purged errors)
[2026-03-09 23:58:36] 2026-03-09 22:57:45,693 | INFO     | overall cleanup function is called
[2026-03-09 23:58:36] 2026-03-09 22:57:46,700 | INFO     | --- collectZombieJob: --- 10, [2848107]
[2026-03-09 23:58:36] 2026-03-09 22:57:46,700 | INFO     | zombie collector waiting for pid 2848107
[2026-03-09 23:58:36] 2026-03-09 22:57:46,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 23:58:36] 2026-03-09 22:57:46,700 | INFO     | collected zombie processes
[2026-03-09 23:58:36] 2026-03-09 22:57:46,700 | INFO     | will attempt to kill all subprocesses of pid=2848107
[2026-03-09 23:58:36] 2026-03-09 22:57:47,319 | INFO     | PID=2835176 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 23:58:36] 2026-03-09 22:57:47,319 | INFO     | .. there are 57 such processes running
[2026-03-09 23:58:36] 2026-03-09 22:57:47,592 | INFO     | process IDs to be killed: [2848107] (in reverse order)
[2026-03-09 23:58:36] 2026-03-09 22:57:47,799 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 23:58:36] 2026-03-09 22:57:47,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 23:58:36] 2026-03-09 22:57:47,824 | INFO     | did not find any defunct processes belonging to 2848107
[2026-03-09 23:58:36] 2026-03-09 22:57:47,847 | INFO     | did not find any defunct processes belonging to 2848107
[2026-03-09 23:58:36] 2026-03-09 22:57:47,848 | INFO     | ready for new job
[2026-03-09 23:58:36] 2026-03-09 22:57:47,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 23:58:36] 2026-03-09 22:57:47,849 | INFO     | **************************************
[2026-03-09 23:58:36] 2026-03-09 22:57:47,849 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 23:58:36] 2026-03-09 22:57:47,850 | INFO     | **************************************
[2026-03-09 23:58:36] 2026-03-09 22:57:47,850 | INFO     | 
[2026-03-09 23:58:36] 2026-03-09 22:57:47,856 | INFO     | architecture information:
[2026-03-09 23:58:36] 2026-03-09 22:57:47,857 | INFO     | executing command: cat /etc/os-release
[2026-03-09 23:58:36] 2026-03-09 22:57:47,871 | INFO     | cat /etc/os-release:
[2026-03-09 23:58:36] NAME="CentOS Linux"
[2026-03-09 23:58:36] VERSION="7 (Core)"
[2026-03-09 23:58:36] ID="centos"
[2026-03-09 23:58:36] ID_LIKE="rhel fedora"
[2026-03-09 23:58:36] VERSION_ID="7"
[2026-03-09 23:58:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 23:58:36] ANSI_COLOR="0;31"
[2026-03-09 23:58:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 23:58:36] HOME_URL="https://www.centos.org/"
[2026-03-09 23:58:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 23:58:36] 
[2026-03-09 23:58:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 23:58:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 23:58:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 23:58:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 23:58:36] 
[2026-03-09 23:58:36] 2026-03-09 22:57:47,871 | INFO     | **************************************
[2026-03-09 23:58:36] 2026-03-09 22:57:48,372 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/5
[2026-03-09 23:58:36] 2026-03-09 22:57:48,390 | INFO     | sufficient remaining disk space (19571671040 B)
[2026-03-09 23:58:36] 2026-03-09 22:57:48,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 23:58:36] 2026-03-09 22:57:48,391 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 23:58:36] 2026-03-09 22:57:48,391 | INFO     | update_server=False
[2026-03-09 23:58:36] 2026-03-09 22:57:48,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 23:58:36] 2026-03-09 22:57:48,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 23:58:36] 2026-03-09 22:57:48,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:58:36] 2026-03-09 22:57:48,392 | INFO     | aborting loop
[2026-03-09 23:58:36] 2026-03-09 22:57:48,567 | INFO     | all data control threads have been joined
[2026-03-09 23:58:36] 2026-03-09 22:57:49,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 23:58:36] 2026-03-09 22:57:49,110 | INFO     | all job control threads have been joined
[2026-03-09 23:58:36] 2026-03-09 22:57:49,305 | INFO     | all payload control threads have been joined
[2026-03-09 23:58:36] 2026-03-09 22:57:49,394 | INFO     | [job] retrieve thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:49,395 | INFO     | [job] job monitor thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:49,481 | INFO     | [job] validate thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:49,572 | INFO     | [data] control thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:49,624 | INFO     | [payload] validate_post thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:49,749 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:49,774 | INFO     | [payload] failed_post thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:49,779 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:50,075 | INFO     | [data] copytool_in thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:50,115 | INFO     | [job] control thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:50,309 | INFO     | [payload] control thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:50,397 | INFO     | [data] copytool_out thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:50,481 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:50,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:58:36] 2026-03-09 22:57:50,702 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:51,688 | INFO     | [job] queue monitor thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:57:53,073 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 23:58:36] 2026-03-09 22:58:19,832 | INFO     | PID=2835176 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 23:58:36] 2026-03-09 22:58:19,833 | INFO     | .. there are 57 such processes running
[2026-03-09 23:58:36] 2026-03-09 22:58:19,833 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 23:58:36] 2026-03-09 22:58:19,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 23:58:36] 2026-03-09 22:58:19,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 23:58:36] 2026-03-09 22:58:31,113 | INFO     | [monitor] cgroup control has ended
[2026-03-09 23:58:36] 2026-03-09 22:58:31,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22780525389632)>', '<ExcThread(monitor, started 22780289763072)>']
[2026-03-09 23:58:36] 2026-03-09 22:58:31,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 23:58:36] 2026-03-09 22:58:31,884 | INFO     | [monitor] control thread has ended
[2026-03-09 23:58:36] 2026-03-09 22:58:36,307 | INFO     | all workflow threads have been joined
[2026-03-09 23:58:36] 2026-03-09 22:58:36,307 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 23:58:36] 2026-03-09 22:58:36,307 | INFO     | traces error code: 0
[2026-03-09 23:58:36] 2026-03-09 22:58:36,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 23:58:36] 2026-03-09 22:58:36,424 [wrapper] ==== pilot stdout END ====
[2026-03-09 23:58:36] 2026-03-09 22:58:36,428 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 23:58:36] 2026-03-09 22:58:36,429 [wrapper] pilotpid: 2835176
[2026-03-09 23:58:36] 2026-03-09 22:58:36,431 [wrapper] Pilot exit status: 0
[2026-03-09 23:58:36] 2026-03-09 22:58:36,439 [wrapper] pandaids: 7045814073
[2026-03-09 23:58:36] 2026-03-09 22:58:36,544 [wrapper] cleanup supervisor_pilot 4024754 2835177
[2026-03-09 23:58:36] 2026-03-09 22:58:36,546 [wrapper] Test setup, not cleaning
[2026-03-09 23:58:36] 2026-03-09 22:58:36,548 [wrapper] apfmon messages muted
[2026-03-09 23:58:36] 2026-03-09 22:58:36,549 [wrapper] ==== wrapper stdout END ====
[2026-03-09 23:58:36] 2026-03-09 22:58:36,550 [wrapper] ==== wrapper stderr END ====
[2026-03-09 23:58:36]  *** Error codes and diagnostics ***
[2026-03-09 23:58:36]     "exeErrorCode": 0,
[2026-03-09 23:58:36]     "exeErrorDiag": "",
[2026-03-09 23:58:36]     "pilotErrorCode": 0,
[2026-03-09 23:58:36]     "pilotErrorDiag": "",
[2026-03-09 23:58:36]  *** Listing of results directory ***
[2026-03-09 23:58:36] total 567692
[2026-03-09 23:58:36] -rwx------. 1 boinc boinc     36322 Mar  8 04:54 runpilot2-wrapper.sh
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc      5111 Mar  8 04:55 queuedata.json
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc    584627 Mar  8 04:55 pilot3.tar.gz
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc       100 Mar  9 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 23:58:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 22:12 run_atlas
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc       105 Mar  9 22:12 job.xml
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc      6705 Mar  9 22:12 init_data.xml
[2026-03-09 23:58:36] -rw-r--r--. 2 boinc boinc 327760096 Mar  9 22:12 EVNT.48997945._000051.pool.root.1
[2026-03-09 23:58:36] -rw-r--r--. 2 boinc boinc     15845 Mar  9 22:12 start_atlas.sh
[2026-03-09 23:58:36] drwxrwx--x. 2 boinc boinc      4096 Mar  9 22:12 shared
[2026-03-09 23:58:36] -rw-r--r--. 2 boinc boinc    597947 Mar  9 22:12 input.tar.gz
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc         0 Mar  9 22:12 boinc_lockfile
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc      2571 Mar  9 22:12 pandaJob.out
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc   1002738 Mar  9 22:12 agis_schedconf.cvmfs.json
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc   1511578 Mar  9 22:12 agis_ddmendpoints.agis.ALL.json
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc       444 Mar  9 22:12 workernode_map.json
[2026-03-09 23:58:36] drwx------. 5 boinc boinc      4096 Mar  9 22:12 pilot3
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc 247221113 Mar  9 23:57 HITS.48997948._001258.pool.root.1
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc       529 Mar  9 23:57 boinc_task_state.xml
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc        95 Mar  9 23:57 pilot_heartbeat.json
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc      1033 Mar  9 23:57 memory_monitor_summary.json
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc    283475 Mar  9 23:57 log.48997948._001258.job.log.tgz.1
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc      6348 Mar  9 23:57 heartbeat.json
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc        27 Mar  9 23:58 wrapper_checkpoint.txt
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc      8192 Mar  9 23:58 boinc_mmap_file
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc      4829 Mar  9 23:58 pilotlog.txt
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc    917447 Mar  9 23:58 log.48997948._001258.job.log.1
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc       357 Mar  9 23:58 output.list
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc       620 Mar  9 23:58 runtime_log
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc   1218560 Mar  9 23:58 result.tar.gz
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc      9204 Mar  9 23:58 runtime_log.err
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc       662 Mar  9 23:58 oibNDmEPKJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDme7XLDm062RGn.diag
[2026-03-09 23:58:36] -rw-r--r--. 1 boinc boinc     20976 Mar  9 23:58 stderr.txt
[2026-03-09 23:58:36] HITS file was successfully produced:
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc 247221113 Mar  9 23:57 shared/HITS.pool.root.1
[2026-03-09 23:58:36]  *** Contents of shared directory: ***
[2026-03-09 23:58:36] total 563308
[2026-03-09 23:58:36] -rw-r--r--. 2 boinc boinc 327760096 Mar  9 22:12 ATLAS.root_0
[2026-03-09 23:58:36] -rw-r--r--. 2 boinc boinc     15845 Mar  9 22:12 start_atlas.sh
[2026-03-09 23:58:36] -rw-r--r--. 2 boinc boinc    597947 Mar  9 22:12 input.tar.gz
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc 247221113 Mar  9 23:57 HITS.pool.root.1
[2026-03-09 23:58:36] -rw-------. 1 boinc boinc   1218560 Mar  9 23:58 result.tar.gz
23:58:38 (2830593): run_atlas exited; CPU time 24614.053218
23:58:38 (2830593): called boinc_finish(0)

</stderr_txt>
]]>

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