Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:07:25 (2139771): wrapper (7.7.26015): starting
16:07:25 (2139771): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 16:07:25] Arguments: --nthreads 4
[2026-03-09 16:07:25] Threads: 4
[2026-03-09 16:07:25] Checking for CVMFS
[2026-03-09 16:07:25] No cvmfs_config command found, will try listing directly
[2026-03-09 16:07:25] CVMFS is ok
[2026-03-09 16:07:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 16:07:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 16:07:25] Further information can be found at the LHC@home message board.
[2026-03-09 16:07:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:07:25] Checking for apptainer binary...
[2026-03-09 16:07:25] which: no apptainer in ((null))
[2026-03-09 16:07:25] apptainer is not installed, using version from CVMFS
[2026-03-09 16:07:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:07:25] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-09 16:07:25] apptainer works
[2026-03-09 16:07:25] Set ATHENA_PROC_NUMBER=4
[2026-03-09 16:07:25] Set ATHENA_CORE_NUMBER=4
[2026-03-09 16:07:25] Starting ATLAS job with PandaID=7045950246
[2026-03-09 16:07:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:05:59]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:05:59] 2026-03-09 17:05:21,571 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_815905/.job.ad'
[2026-03-09 18:05:59] 2026-03-09 17:05:21,571 | INFO     | total number of processed events: 400 (read)
[2026-03-09 18:05:59] 2026-03-09 17:05:21,584 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7045950246/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:05:59] 2026-03-09 17:05:21,584 | INFO     | extracted standard info from prmon json
[2026-03-09 18:05:59] 2026-03-09 17:05:21,584 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 18:05:59] 2026-03-09 17:05:21,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 18:05:59] 2026-03-09 17:05:21,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 18:05:59] 2026-03-09 17:05:21,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 18:05:59] 2026-03-09 17:05:21,585 | INFO     | fitting pss+swap vs Time
[2026-03-09 18:05:59] 2026-03-09 17:05:21,585 | INFO     | sum of square deviations: 483971865.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,585 | INFO     | sum of deviations: 4103026072.500003
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | mean x: 1773072393.5
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | mean y: 2307382.1120689656
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | intersect: -15029480176.36612
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | chi2: 1.900102277889598
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | sum of square deviations: 424045160.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | sum of deviations: 11015466864.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | mean x: 1773072241.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | mean y: 2324317.4954954954
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | intersect: -46056964552.14688
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | chi2: 1.080609119079238
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | current chi2=1.080609119079238 (change=43.128897236024216 %)
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | sum of square deviations: 369281342.5
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | sum of deviations: 10408487340.000002
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | mean x: 1773072088.5
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | mean y: 2322626.1886792453
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | intersect: -49973119569.51232
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | chi2: 1.0823053987170401
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | current chi2=1.0823053987170401 (change=-0.15697439600061192 %)
[2026-03-09 18:05:59] 2026-03-09 17:05:21,586 | INFO     | right removable region: 105
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | sum of square deviations: 424045160.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | sum of deviations: -5568553421.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | mean x: 1773072546.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | mean y: 2331197.009009009
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | intersect: 23286288008.848297
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | chi2: 0.850164517367909
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | current chi2=0.850164517367909 (change=55.25690762751109 %)
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | sum of square deviations: 369281342.5
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | sum of deviations: -5317898900.5
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | mean x: 1773072698.5
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | mean y: 2330505.103773585
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | intersect: 25535766042.42643
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | chi2: 0.8510912558525892
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | current chi2=0.8510912558525892 (change=-0.1090069587412716 %)
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | left removable region: 20
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | sum of square deviations: 190403570.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | sum of deviations: 798299863.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | mean x: 1773072668.0
[2026-03-09 18:05:59] 2026-03-09 17:05:21,587 | INFO     | mean y: 2351280.8470588233
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | intersect: -7431562211.181711
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | chi2: 9.612996908034684e-05
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | current memory leak: 4.19 B/s (using 85 data points, chi2=0.00)
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | could have reported an average CPU frequency of 3534 MHz (7 samples)
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | ..............................
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | . Timing measurements:
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | . get job = 0 s
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | . initial setup = 6 s
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | . payload setup = 6 s
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | . stage-in = 0 s
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | . payload execution = 7030 s
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | . stage-out = 0 s
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | . log creation = 0 s
[2026-03-09 18:05:59] 2026-03-09 17:05:21,588 | INFO     | ..............................
[2026-03-09 18:05:59] 2026-03-09 17:05:21,928 | INFO     | time since job start (7059s) is within the limit (349056.0s)
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | 
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | job summary report
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | --------------------------------------------------
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | PanDA job id: 7045950246
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | task id: 48998012
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | errors: (none)
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | pilot state: finished 
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | transexitcode: 0
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | exeerrorcode: 0
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | exeerrordiag: 
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | exitcode: 0
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | exitmsg: OK
[2026-03-09 18:05:59] 2026-03-09 17:05:22,107 | INFO     | cpuconsumptiontime: 26955 s
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | nevents: 400
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | neventsw: 0
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | pid: 2150198
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | pgrp: 2150198
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | corecount: 4
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | event service: False
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | sizes: {0: 2280275, 11: 2280275, 7040: 2307606, 7042: 2316628, 7045: 2316684, 7047: 2316878}
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | --------------------------------------------------
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | 
[2026-03-09 18:05:59] 2026-03-09 17:05:22,108 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,124 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 18:05:59] 2026-03-09 17:05:22,125 | INFO     | job 7045950246 has completed (purged errors)
[2026-03-09 18:05:59] 2026-03-09 17:05:22,125 | INFO     | overall cleanup function is called
[2026-03-09 18:05:59] 2026-03-09 17:05:23,132 | INFO     | --- collectZombieJob: --- 10, [2150198]
[2026-03-09 18:05:59] 2026-03-09 17:05:23,132 | INFO     | zombie collector waiting for pid 2150198
[2026-03-09 18:05:59] 2026-03-09 17:05:23,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 18:05:59] 2026-03-09 17:05:23,132 | INFO     | collected zombie processes
[2026-03-09 18:05:59] 2026-03-09 17:05:23,132 | INFO     | will attempt to kill all subprocesses of pid=2150198
[2026-03-09 18:05:59] 2026-03-09 17:05:23,552 | INFO     | process IDs to be killed: [2150198] (in reverse order)
[2026-03-09 18:05:59] 2026-03-09 17:05:23,758 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 18:05:59] 2026-03-09 17:05:23,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 18:05:59] 2026-03-09 17:05:23,784 | INFO     | did not find any defunct processes belonging to 2150198
[2026-03-09 18:05:59] 2026-03-09 17:05:23,808 | INFO     | did not find any defunct processes belonging to 2150198
[2026-03-09 18:05:59] 2026-03-09 17:05:23,808 | INFO     | ready for new job
[2026-03-09 18:05:59] 2026-03-09 17:05:23,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 18:05:59] 2026-03-09 17:05:23,809 | INFO     | **************************************
[2026-03-09 18:05:59] 2026-03-09 17:05:23,810 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 18:05:59] 2026-03-09 17:05:23,810 | INFO     | **************************************
[2026-03-09 18:05:59] 2026-03-09 17:05:23,810 | INFO     | 
[2026-03-09 18:05:59] 2026-03-09 17:05:23,816 | INFO     | architecture information:
[2026-03-09 18:05:59] 2026-03-09 17:05:23,817 | INFO     | executing command: cat /etc/os-release
[2026-03-09 18:05:59] 2026-03-09 17:05:23,829 | INFO     | cat /etc/os-release:
[2026-03-09 18:05:59] NAME="CentOS Linux"
[2026-03-09 18:05:59] VERSION="7 (Core)"
[2026-03-09 18:05:59] ID="centos"
[2026-03-09 18:05:59] ID_LIKE="rhel fedora"
[2026-03-09 18:05:59] VERSION_ID="7"
[2026-03-09 18:05:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 18:05:59] ANSI_COLOR="0;31"
[2026-03-09 18:05:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 18:05:59] HOME_URL="https://www.centos.org/"
[2026-03-09 18:05:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:05:59] 
[2026-03-09 18:05:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:05:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:05:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:05:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:05:59] 
[2026-03-09 18:05:59] 2026-03-09 17:05:23,829 | INFO     | **************************************
[2026-03-09 18:05:59] 2026-03-09 17:05:24,332 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-09 18:05:59] 2026-03-09 17:05:24,345 | INFO     | sufficient remaining disk space (21388853248 B)
[2026-03-09 18:05:59] 2026-03-09 17:05:24,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:05:59] 2026-03-09 17:05:24,345 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:05:59] 2026-03-09 17:05:24,345 | INFO     | update_server=False
[2026-03-09 18:05:59] 2026-03-09 17:05:24,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:05:59] 2026-03-09 17:05:24,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:05:59] 2026-03-09 17:05:24,346 | INFO     | aborting loop
[2026-03-09 18:05:59] 2026-03-09 17:05:24,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:05:59] 2026-03-09 17:05:24,617 | INFO     | all job control threads have been joined
[2026-03-09 18:05:59] 2026-03-09 17:05:25,093 | INFO     | all payload control threads have been joined
[2026-03-09 18:05:59] 2026-03-09 17:05:25,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:05:59] 2026-03-09 17:05:25,350 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:25,351 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:25,366 | INFO     | all data control threads have been joined
[2026-03-09 18:05:59] 2026-03-09 17:05:25,622 | INFO     | [job] control thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:25,869 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:26,074 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:26,092 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:26,098 | INFO     | [payload] control thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:26,154 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:26,275 | INFO     | [job] validate thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:26,371 | INFO     | [data] control thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:26,387 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:26,454 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:26,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:05:59] 2026-03-09 17:05:26,859 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:27,633 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:29,282 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:34,617 | INFO     | job.realtimelogging is not enabled
[2026-03-09 18:05:59] 2026-03-09 17:05:35,622 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:05:59] 2026-03-09 17:05:54,189 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:05:59] 2026-03-09 17:05:54,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22676818888512)>', '<ExcThread(monitor, started 22676579297024)>']
[2026-03-09 18:05:59] 2026-03-09 17:05:55,487 | INFO     | PID=2144359 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 18:05:59] 2026-03-09 17:05:55,487 | INFO     | .. there are 62 such processes running
[2026-03-09 18:05:59] 2026-03-09 17:05:55,487 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:05:59] 2026-03-09 17:05:55,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:05:59] 2026-03-09 17:05:55,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:05:59] 2026-03-09 17:05:55,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:05:59] 2026-03-09 17:05:55,488 | INFO     | [monitor] control thread has ended
[2026-03-09 18:05:59] 2026-03-09 17:05:59,590 | INFO     | all workflow threads have been joined
[2026-03-09 18:05:59] 2026-03-09 17:05:59,590 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:05:59] 2026-03-09 17:05:59,590 | INFO     | traces error code: 0
[2026-03-09 18:05:59] 2026-03-09 17:05:59,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:05:59] 2026-03-09 17:05:59,717 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:05:59] 2026-03-09 17:05:59,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:05:59] 2026-03-09 17:05:59,723 [wrapper] pilotpid: 2144359
[2026-03-09 18:05:59] 2026-03-09 17:05:59,724 [wrapper] Pilot exit status: 0
[2026-03-09 18:05:59] 2026-03-09 17:05:59,734 [wrapper] pandaids: 7045950246
[2026-03-09 18:05:59] 2026-03-09 17:05:59,848 [wrapper] cleanup supervisor_pilot 3334395 2144360
[2026-03-09 18:05:59] 2026-03-09 17:05:59,851 [wrapper] Test setup, not cleaning
[2026-03-09 18:05:59] 2026-03-09 17:05:59,854 [wrapper] apfmon messages muted
[2026-03-09 18:05:59] 2026-03-09 17:05:59,856 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:05:59] 2026-03-09 17:05:59,858 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:05:59]  *** Error codes and diagnostics ***
[2026-03-09 18:05:59]     "exeErrorCode": 0,
[2026-03-09 18:05:59]     "exeErrorDiag": "",
[2026-03-09 18:05:59]     "pilotErrorCode": 0,
[2026-03-09 18:05:59]     "pilotErrorDiag": "",
[2026-03-09 18:05:59]  *** Listing of results directory ***
[2026-03-09 18:05:59] total 596708
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc    584627 Mar  8 08:59 pilot3.tar.gz
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc      5111 Mar  8 09:56 queuedata.json
[2026-03-09 18:05:59] -rwx------. 1 boinc boinc     36322 Mar  8 09:56 runpilot2-wrapper.sh
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc       100 Mar  9 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:05:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 16:07 run_atlas
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc       105 Mar  9 16:07 job.xml
[2026-03-09 18:05:59] -rw-r--r--. 2 boinc boinc 342782974 Mar  9 16:07 EVNT.48998009._000033.pool.root.1
[2026-03-09 18:05:59] -rw-r--r--. 2 boinc boinc    597962 Mar  9 16:07 input.tar.gz
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc      6708 Mar  9 16:07 init_data.xml
[2026-03-09 18:05:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 16:07 start_atlas.sh
[2026-03-09 18:05:59] drwxrwx--x. 2 boinc boinc      4096 Mar  9 16:07 shared
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc         0 Mar  9 16:07 boinc_lockfile
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc      2585 Mar  9 16:07 pandaJob.out
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc    990760 Mar  9 16:07 agis_schedconf.cvmfs.json
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc   1511578 Mar  9 16:07 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc       445 Mar  9 16:07 workernode_map.json
[2026-03-09 18:05:59] drwx------. 5 boinc boinc      4096 Mar  9 16:07 pilot3
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc 261678701 Mar  9 18:04 HITS.48998012._000570.pool.root.1
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc        95 Mar  9 18:05 pilot_heartbeat.json
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc       529 Mar  9 18:05 boinc_task_state.xml
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc      1030 Mar  9 18:05 memory_monitor_summary.json
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc    309620 Mar  9 18:05 log.48998012._000570.job.log.tgz.1
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc      6350 Mar  9 18:05 heartbeat.json
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc      8192 Mar  9 18:05 boinc_mmap_file
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc        27 Mar  9 18:05 wrapper_checkpoint.txt
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc      4902 Mar  9 18:05 pilotlog.txt
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc   1011297 Mar  9 18:05 log.48998012._000570.job.log.1
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc       357 Mar  9 18:05 output.list
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc       620 Mar  9 18:05 runtime_log
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc   1341440 Mar  9 18:05 result.tar.gz
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc       663 Mar  9 18:05 jXQLDmv6OJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8GWLDmSsEZRo.diag
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc      9221 Mar  9 18:05 runtime_log.err
[2026-03-09 18:05:59] -rw-r--r--. 1 boinc boinc     20865 Mar  9 18:05 stderr.txt
[2026-03-09 18:05:59] HITS file was successfully produced:
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc 261678701 Mar  9 18:04 shared/HITS.pool.root.1
[2026-03-09 18:05:59]  *** Contents of shared directory: ***
[2026-03-09 18:05:59] total 592220
[2026-03-09 18:05:59] -rw-r--r--. 2 boinc boinc 342782974 Mar  9 16:07 ATLAS.root_0
[2026-03-09 18:05:59] -rw-r--r--. 2 boinc boinc    597962 Mar  9 16:07 input.tar.gz
[2026-03-09 18:05:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 16:07 start_atlas.sh
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc 261678701 Mar  9 18:04 HITS.pool.root.1
[2026-03-09 18:05:59] -rw-------. 1 boinc boinc   1341440 Mar  9 18:05 result.tar.gz
18:06:01 (2139771): run_atlas exited; CPU time 27272.723056
18:06:01 (2139771): called boinc_finish(0)

</stderr_txt>
]]>

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