Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:49:37 (1586313): wrapper (7.7.26015): starting
12:49:37 (1586313): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 12:49:37] Arguments: --nthreads 4
[2026-03-09 12:49:37] Threads: 4
[2026-03-09 12:49:37] Checking for CVMFS
[2026-03-09 12:49:37] No cvmfs_config command found, will try listing directly
[2026-03-09 12:49:37] CVMFS is ok
[2026-03-09 12:49:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 12:49:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 12:49:37] Further information can be found at the LHC@home message board.
[2026-03-09 12:49:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 12:49:37] Checking for apptainer binary...
[2026-03-09 12:49:37] which: no apptainer in ((null))
[2026-03-09 12:49:37] apptainer is not installed, using version from CVMFS
[2026-03-09 12:49:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 12:49:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot172/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-09 12:49:37] apptainer works
[2026-03-09 12:49:37] Set ATHENA_PROC_NUMBER=4
[2026-03-09 12:49:37] Set ATHENA_CORE_NUMBER=4
[2026-03-09 12:49:37] Starting ATLAS job with PandaID=7045949839
[2026-03-09 12:49:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot172/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 14:29:12]  *** The last 200 lines of the pilot log: ***
[2026-03-09 14:29:12]  filetype=log
[2026-03-09 14:29:12]  guid=b1ee5c69-5670-4a1e-9a61-c00f77549d74
[2026-03-09 14:29:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 14:29:12]  is_altstaged=None
[2026-03-09 14:29:12]  is_tar=False
[2026-03-09 14:29:12]  lfn=log.48958635._001993.job.log.tgz.1
[2026-03-09 14:29:12]  mtime=0
[2026-03-09 14:29:12]  protocol_id=None
[2026-03-09 14:29:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 14:29:12]  replicas=None
[2026-03-09 14:29:12]  scope=mc23_13p6TeV
[2026-03-09 14:29:12]  status=None
[2026-03-09 14:29:12]  status_code=0
[2026-03-09 14:29:12]  storage_token=
[2026-03-09 14:29:12]  surl=/var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045949839/log.48958635._001993.job.log.tgz.1
[2026-03-09 14:29:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/64/log.48958635._001993.job.log.tgz.1
[2026-03-09 14:29:12]  workdir=None
[2026-03-09 14:29:12] ]
[2026-03-09 14:29:12] 2026-03-09 13:28:11,908 | INFO     | transferring file log.48958635._001993.job.log.tgz.1 from /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045949839/log.48958635._001993.job.log.tgz.1 to /var/lib/
[2026-03-09 14:29:12] 2026-03-09 13:28:11,908 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045949839/log.48958635._001993.job.log.tgz.1 /var/lib/boinc/var/slot172/slots/0/
[2026-03-09 14:29:12] 2026-03-09 13:28:11,923 | INFO     | adding to output.list: log.48958635._001993.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/64/log.48958635._001993.job.log.tg
[2026-03-09 14:29:12] 2026-03-09 13:28:11,923 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 14:29:12] 2026-03-09 13:28:11,923 | INFO     | summary of transferred files:
[2026-03-09 14:29:12] 2026-03-09 13:28:11,923 | INFO     |  -- lfn=log.48958635._001993.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 14:29:12] 2026-03-09 13:28:11,923 | INFO     | stage-out finished correctly
[2026-03-09 14:29:12] 2026-03-09 13:28:11,972 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 14:29:12] 2026-03-09 13:28:12,594 | INFO     | monitor loop #422: job 0:7045949839 is in state 'finished'
[2026-03-09 14:29:12] 2026-03-09 13:28:12,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 14:29:12] 2026-03-09 13:28:13,409 | INFO     | time since job start (5897s) is within the limit (349056.0s)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,073 | INFO     | job 7045949839 has state=finished
[2026-03-09 14:29:12] 2026-03-09 13:28:14,073 | INFO     | preparing for final server update for job 7045949839 in state='finished'
[2026-03-09 14:29:12] 2026-03-09 13:28:14,073 | INFO     | reading metadata from: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045949839/jobReport.json
[2026-03-09 14:29:12] 2026-03-09 13:28:14,075 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot172/slots/0/workernode_map.json
[2026-03-09 14:29:12] 2026-03-09 13:28:14,075 | INFO     | this job has now completed (state=finished)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,075 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,075 | INFO     | log transfer has been attempted: DONE
[2026-03-09 14:29:12] 2026-03-09 13:28:14,075 | INFO     | job 7045949839 has finished - writing final server update
[2026-03-09 14:29:12] 2026-03-09 13:28:14,075 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_59840/.job.ad'
[2026-03-09 14:29:12] 2026-03-09 13:28:14,075 | INFO     | total number of processed events: 400 (read)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,093 | INFO     | using path: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045949839/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,094 | INFO     | extracted standard info from prmon json
[2026-03-09 14:29:12] 2026-03-09 13:28:14,094 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 14:29:12] 2026-03-09 13:28:14,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 14:29:12] 2026-03-09 13:28:14,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 14:29:12] 2026-03-09 13:28:14,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 14:29:12] 2026-03-09 13:28:14,095 | INFO     | fitting pss+swap vs Time
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | sum of square deviations: 226022842.5
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | sum of deviations: 818896940.0000001
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | mean x: 1773060042.5
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | mean y: 2350584.888888889
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | intersect: -6421572887.534125
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | chi2: 0.0007280695336999337
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | current memory leak: 3.62 B/s (using 90 data points, chi2=0.00)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | could have reported an average CPU frequency of 3535 MHz (7 samples)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | ..............................
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | . Timing measurements:
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | . get job = 0 s
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | . initial setup = 6 s
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | . payload setup = 9 s
[2026-03-09 14:29:12] 2026-03-09 13:28:14,096 | INFO     | . stage-in = 0 s
[2026-03-09 14:29:12] 2026-03-09 13:28:14,097 | INFO     | . payload execution = 5870 s
[2026-03-09 14:29:12] 2026-03-09 13:28:14,097 | INFO     | . stage-out = 0 s
[2026-03-09 14:29:12] 2026-03-09 13:28:14,097 | INFO     | . log creation = 0 s
[2026-03-09 14:29:12] 2026-03-09 13:28:14,097 | INFO     | ..............................
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | 
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | job summary report
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | --------------------------------------------------
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | PanDA job id: 7045949839
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | task id: 48958635
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | errors: (none)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | pilot state: finished 
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | transexitcode: 0
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | exeerrorcode: 0
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | exeerrordiag: 
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | exitcode: 0
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | exitmsg: OK
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | cpuconsumptiontime: 22275 s
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | nevents: 400
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | neventsw: 0
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | pid: 1605986
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | pgrp: 1605986
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | corecount: 4
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | event service: False
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | sizes: {0: 2279096, 1: 2280226, 11: 2280226, 5883: 2307062, 5884: 2307061, 5885: 2316323, 5887: 2316461}
[2026-03-09 14:29:12] 2026-03-09 13:28:14,144 | INFO     | --------------------------------------------------
[2026-03-09 14:29:12] 2026-03-09 13:28:14,145 | INFO     | 
[2026-03-09 14:29:12] 2026-03-09 13:28:14,145 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot172/slots/0
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | job 7045949839 has completed (purged errors)
[2026-03-09 14:29:12] 2026-03-09 13:28:14,162 | INFO     | overall cleanup function is called
[2026-03-09 14:29:12] 2026-03-09 13:28:15,168 | INFO     | --- collectZombieJob: --- 10, [1605986]
[2026-03-09 14:29:12] 2026-03-09 13:28:15,169 | INFO     | zombie collector waiting for pid 1605986
[2026-03-09 14:29:12] 2026-03-09 13:28:15,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 14:29:12] 2026-03-09 13:28:15,169 | INFO     | collected zombie processes
[2026-03-09 14:29:12] 2026-03-09 13:28:15,169 | INFO     | will attempt to kill all subprocesses of pid=1605986
[2026-03-09 14:29:12] 2026-03-09 13:28:15,655 | INFO     | process IDs to be killed: [1605986] (in reverse order)
[2026-03-09 14:29:12] 2026-03-09 13:28:15,884 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 14:29:12] 2026-03-09 13:28:15,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 14:29:12] 2026-03-09 13:28:15,912 | INFO     | did not find any defunct processes belonging to 1605986
[2026-03-09 14:29:12] 2026-03-09 13:28:15,937 | INFO     | did not find any defunct processes belonging to 1605986
[2026-03-09 14:29:12] 2026-03-09 13:28:15,938 | INFO     | ready for new job
[2026-03-09 14:29:12] 2026-03-09 13:28:15,938 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 14:29:12] 2026-03-09 13:28:15,939 | INFO     | **************************************
[2026-03-09 14:29:12] 2026-03-09 13:28:15,939 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 14:29:12] 2026-03-09 13:28:15,939 | INFO     | **************************************
[2026-03-09 14:29:12] 2026-03-09 13:28:15,939 | INFO     | 
[2026-03-09 14:29:12] 2026-03-09 13:28:15,945 | INFO     | architecture information:
[2026-03-09 14:29:12] 2026-03-09 13:28:15,945 | INFO     | executing command: cat /etc/os-release
[2026-03-09 14:29:12] 2026-03-09 13:28:15,957 | INFO     | cat /etc/os-release:
[2026-03-09 14:29:12] NAME="CentOS Linux"
[2026-03-09 14:29:12] VERSION="7 (Core)"
[2026-03-09 14:29:12] ID="centos"
[2026-03-09 14:29:12] ID_LIKE="rhel fedora"
[2026-03-09 14:29:12] VERSION_ID="7"
[2026-03-09 14:29:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 14:29:12] ANSI_COLOR="0;31"
[2026-03-09 14:29:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 14:29:12] HOME_URL="https://www.centos.org/"
[2026-03-09 14:29:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 14:29:12] 
[2026-03-09 14:29:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 14:29:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 14:29:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 14:29:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 14:29:12] 
[2026-03-09 14:29:12] 2026-03-09 13:28:15,957 | INFO     | **************************************
[2026-03-09 14:29:12] 2026-03-09 13:28:16,460 | INFO     | executing command: df -mP /var/lib/boinc/var/slot172/slots/0
[2026-03-09 14:29:12] 2026-03-09 13:28:16,476 | INFO     | sufficient remaining disk space (21447573504 B)
[2026-03-09 14:29:12] 2026-03-09 13:28:16,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 14:29:12] 2026-03-09 13:28:16,477 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 14:29:12] 2026-03-09 13:28:16,477 | INFO     | update_server=False
[2026-03-09 14:29:12] 2026-03-09 13:28:16,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 14:29:12] 2026-03-09 13:28:16,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:29:12] 2026-03-09 13:28:16,478 | INFO     | aborting loop
[2026-03-09 14:29:12] 2026-03-09 13:28:16,851 | INFO     | all payload control threads have been joined
[2026-03-09 14:29:12] 2026-03-09 13:28:16,863 | INFO     | all data control threads have been joined
[2026-03-09 14:29:12] 2026-03-09 13:28:16,988 | INFO     | job.realtimelogging is not enabled
[2026-03-09 14:29:12] 2026-03-09 13:28:17,459 | INFO     | all job control threads have been joined
[2026-03-09 14:29:12] 2026-03-09 13:28:17,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 14:29:12] 2026-03-09 13:28:17,482 | INFO     | [job] retrieve thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:17,483 | INFO     | [job] job monitor thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:17,759 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:17,782 | INFO     | [data] copytool_in thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:17,857 | INFO     | [payload] control thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:17,869 | INFO     | [data] control thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:17,939 | INFO     | [payload] failed_post thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:17,994 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:18,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 14:29:12] 2026-03-09 13:28:18,464 | INFO     | [job] control thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:18,724 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:18,737 | INFO     | [job] validate thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:18,738 | INFO     | [payload] validate_post thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:18,844 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:19,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:29:12] 2026-03-09 13:28:19,483 | INFO     | [data] copytool_out thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:20,158 | INFO     | [job] queue monitor thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:22,034 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 14:29:12] 2026-03-09 13:28:46,986 | INFO     | PID=1591376 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 14:29:12] 2026-03-09 13:28:46,986 | INFO     | .. there are 59 such processes running
[2026-03-09 14:29:12] 2026-03-09 13:28:46,987 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 14:29:12] 2026-03-09 13:28:46,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 14:29:12] 2026-03-09 13:28:46,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 14:29:12] 2026-03-09 13:29:06,168 | INFO     | [monitor] cgroup control has ended
[2026-03-09 14:29:12] 2026-03-09 13:29:07,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22607874840384)>', '<ExcThread(monitor, started 22607639627520)>']
[2026-03-09 14:29:12] 2026-03-09 13:29:08,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 14:29:12] 2026-03-09 13:29:08,090 | INFO     | [monitor] control thread has ended
[2026-03-09 14:29:12] 2026-03-09 13:29:12,189 | INFO     | all workflow threads have been joined
[2026-03-09 14:29:12] 2026-03-09 13:29:12,190 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 14:29:12] 2026-03-09 13:29:12,190 | INFO     | traces error code: 0
[2026-03-09 14:29:12] 2026-03-09 13:29:12,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 14:29:12] 2026-03-09 13:29:12,393 [wrapper] ==== pilot stdout END ====
[2026-03-09 14:29:12] 2026-03-09 13:29:12,395 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 14:29:12] 2026-03-09 13:29:12,397 [wrapper] pilotpid: 1591376
[2026-03-09 14:29:12] 2026-03-09 13:29:12,399 [wrapper] Pilot exit status: 0
[2026-03-09 14:29:12] 2026-03-09 13:29:12,407 [wrapper] pandaids: 7045949839
[2026-03-09 14:29:12] 2026-03-09 13:29:12,522 [wrapper] cleanup supervisor_pilot 2506002 1591377
[2026-03-09 14:29:12] 2026-03-09 13:29:12,526 [wrapper] Test setup, not cleaning
[2026-03-09 14:29:12] 2026-03-09 13:29:12,528 [wrapper] apfmon messages muted
[2026-03-09 14:29:12] 2026-03-09 13:29:12,530 [wrapper] ==== wrapper stdout END ====
[2026-03-09 14:29:12] 2026-03-09 13:29:12,533 [wrapper] ==== wrapper stderr END ====
[2026-03-09 14:29:12]  *** Error codes and diagnostics ***
[2026-03-09 14:29:12]     "exeErrorCode": 0,
[2026-03-09 14:29:12]     "exeErrorDiag": "",
[2026-03-09 14:29:12]     "pilotErrorCode": 0,
[2026-03-09 14:29:12]     "pilotErrorDiag": "",
[2026-03-09 14:29:12]  *** Listing of results directory ***
[2026-03-09 14:29:12] total 454868
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc    584627 Mar  8 08:59 pilot3.tar.gz
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc      5111 Mar  8 09:56 queuedata.json
[2026-03-09 14:29:12] -rwx------. 1 boinc boinc     36322 Mar  8 09:56 runpilot2-wrapper.sh
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc       100 Mar  9 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 14:29:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 12:49 run_atlas
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc       105 Mar  9 12:49 job.xml
[2026-03-09 14:29:12] -rw-r--r--. 2 boinc boinc 264798934 Mar  9 12:49 EVNT.48958633._000078.pool.root.1
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc      6707 Mar  9 12:49 init_data.xml
[2026-03-09 14:29:12] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:49 start_atlas.sh
[2026-03-09 14:29:12] drwxrwx--x. 2 boinc boinc      4096 Mar  9 12:49 shared
[2026-03-09 14:29:12] -rw-r--r--. 2 boinc boinc    597938 Mar  9 12:49 input.tar.gz
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc         0 Mar  9 12:49 boinc_lockfile
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc      2526 Mar  9 12:49 pandaJob.out
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc    990710 Mar  9 12:49 agis_schedconf.cvmfs.json
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc   1511578 Mar  9 12:49 agis_ddmendpoints.agis.ALL.json
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc       445 Mar  9 12:49 workernode_map.json
[2026-03-09 14:29:12] drwx------. 5 boinc boinc      4096 Mar  9 12:49 pilot3
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc 194772263 Mar  9 14:27 HITS.48958635._001993.pool.root.1
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc       529 Mar  9 14:27 boinc_task_state.xml
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc      1031 Mar  9 14:28 memory_monitor_summary.json
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc    294693 Mar  9 14:28 log.48958635._001993.job.log.tgz.1
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc      6353 Mar  9 14:28 heartbeat.json
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc        95 Mar  9 14:28 pilot_heartbeat.json
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc      8192 Mar  9 14:29 boinc_mmap_file
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc        27 Mar  9 14:29 wrapper_checkpoint.txt
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc      4902 Mar  9 14:29 pilotlog.txt
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc    851316 Mar  9 14:29 log.48958635._001993.job.log.1
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc       357 Mar  9 14:29 output.list
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc       620 Mar  9 14:29 runtime_log
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc   1167360 Mar  9 14:29 result.tar.gz
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc      9221 Mar  9 14:29 runtime_log.err
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc       662 Mar  9 14:29 pi3NDmu6OJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm6FWLDmrCGu4m.diag
[2026-03-09 14:29:12] -rw-r--r--. 1 boinc boinc     21164 Mar  9 14:29 stderr.txt
[2026-03-09 14:29:12] HITS file was successfully produced:
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc 194772263 Mar  9 14:27 shared/HITS.pool.root.1
[2026-03-09 14:29:12]  *** Contents of shared directory: ***
[2026-03-09 14:29:12] total 450552
[2026-03-09 14:29:12] -rw-r--r--. 2 boinc boinc 264798934 Mar  9 12:49 ATLAS.root_0
[2026-03-09 14:29:12] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:49 start_atlas.sh
[2026-03-09 14:29:12] -rw-r--r--. 2 boinc boinc    597938 Mar  9 12:49 input.tar.gz
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc 194772263 Mar  9 14:27 HITS.pool.root.1
[2026-03-09 14:29:12] -rw-------. 1 boinc boinc   1167360 Mar  9 14:29 result.tar.gz
14:29:14 (1586313): run_atlas exited; CPU time 22525.490156
14:29:14 (1586313): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN