Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:40:30 (2301851): wrapper (7.7.26015): starting
20:40:30 (2301851): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 20:40:30] Arguments: --nthreads 4
[2026-03-09 20:40:30] Threads: 4
[2026-03-09 20:40:30] Checking for CVMFS
[2026-03-09 20:40:30] No cvmfs_config command found, will try listing directly
[2026-03-09 20:40:30] CVMFS is ok
[2026-03-09 20:40:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 20:40:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 20:40:30] Further information can be found at the LHC@home message board.
[2026-03-09 20:40:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 20:40:30] Checking for apptainer binary...
[2026-03-09 20:40:30] which: no apptainer in ((null))
[2026-03-09 20:40:30] apptainer is not installed, using version from CVMFS
[2026-03-09 20:40:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 20:40:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-09 20:40:30] apptainer works
[2026-03-09 20:40:30] Set ATHENA_PROC_NUMBER=4
[2026-03-09 20:40:30] Set ATHENA_CORE_NUMBER=4
[2026-03-09 20:40:30] Starting ATLAS job with PandaID=7045790579
[2026-03-09 20:40:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 22:24:57]  *** The last 200 lines of the pilot log: ***
[2026-03-09 22:24:57] 2026-03-09 21:24:04,452 | INFO     | mean y: 2297864.7647058824
[2026-03-09 22:24:57] 2026-03-09 21:24:04,452 | INFO     | intersect: -22784072909.59682
[2026-03-09 22:24:57] 2026-03-09 21:24:04,452 | INFO     | chi2: 1.8793834917088548
[2026-03-09 22:24:57] 2026-03-09 21:24:04,452 | INFO     | sum of square deviations: 282974608.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | sum of deviations: 10077793774.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | mean x: 1773088189.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | mean y: 2316404.432989691
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | intersect: -63144045872.20328
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | chi2: 1.100966054257026
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | current chi2=1.100966054257026 (change=41.41876529648785 %)
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | sum of square deviations: 241429643.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | sum of deviations: 9498379600.999998
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | mean x: 1773088036.5
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | mean y: 2314275.717391304
[2026-03-09 22:24:57] 2026-03-09 21:24:04,453 | INFO     | intersect: -69754916143.03752
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | chi2: 1.1029614098580829
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | current chi2=1.1029614098580829 (change=-0.18123679593403394 %)
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | right removable region: 91
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | sum of square deviations: 282974608.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | sum of deviations: -5247736609.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | mean x: 1773088494.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | mean y: 2328235.5773195876
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | intersect: 32884082067.569473
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | chi2: 0.810440632433271
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | current chi2=0.810440632433271 (change=56.877314501876 %)
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | sum of square deviations: 241429643.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,454 | INFO     | sum of deviations: -5229738315.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | mean x: 1773088646.5
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | mean y: 2328155.2608695654
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | intersect: 38410162070.222755
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | chi2: 0.8114124077608439
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | current chi2=0.8114124077608439 (change=-0.11990703435675512 %)
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | left removable region: 20
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | sum of square deviations: 110960220.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | sum of deviations: 257826992.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | mean x: 1773088616.0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | mean y: 2351082.8873239434
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | intersect: -4117594825.770059
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | chi2: 8.208809605512603e-05
[2026-03-09 22:24:57] 2026-03-09 21:24:04,455 | INFO     | current memory leak: 2.32 B/s (using 71 data points, chi2=0.00)
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | could have reported an average CPU frequency of 3591 MHz (7 samples)
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | ..............................
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | . Timing measurements:
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | . get job = 0 s
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | . initial setup = 4 s
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | . payload setup = 4 s
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | . stage-in = 0 s
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | . payload execution = 6182 s
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | . stage-out = 0 s
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | . log creation = 0 s
[2026-03-09 22:24:57] 2026-03-09 21:24:04,456 | INFO     | ..............................
[2026-03-09 22:24:57] 2026-03-09 21:24:04,504 | INFO     | 
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | job summary report
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | --------------------------------------------------
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | PanDA job id: 7045790579
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | task id: 48997948
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | errors: (none)
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | pilot state: finished 
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | transexitcode: 0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | exeerrorcode: 0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | exeerrordiag: 
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | exitcode: 0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | exitmsg: OK
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | cpuconsumptiontime: 23801 s
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | nevents: 400
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | neventsw: 0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | pid: 2312522
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | pgrp: 2312522
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | corecount: 4
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | event service: False
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | sizes: {0: 2279153, 1: 2280283, 11: 2280283, 6191: 2307120, 6192: 2316336}
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | --------------------------------------------------
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | 
[2026-03-09 22:24:57] 2026-03-09 21:24:04,505 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot124/slots/0
[2026-03-09 22:24:57] 2026-03-09 21:24:04,525 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,525 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,525 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,525 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | job 7045790579 has completed (purged errors)
[2026-03-09 22:24:57] 2026-03-09 21:24:04,526 | INFO     | overall cleanup function is called
[2026-03-09 22:24:57] 2026-03-09 21:24:04,911 | WARNING  | process 2312522 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 22:24:57] 2026-03-09 21:24:05,187 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 22:24:57] 2026-03-09 21:24:05,187 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 22:24:57] 2026-03-09 21:24:05,188 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-09 22:24:57] 2026-03-09 21:24:05,188 | WARNING  | maxPSS not found in memory monitor output
[2026-03-09 22:24:57] 2026-03-09 21:24:05,188 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7045790579/payload.stdout) since it has not been created yet
[2026-03-09 22:24:57] 2026-03-09 21:24:05,188 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-03-09 22:24:57] 2026-03-09 21:24:05,204 | INFO     | sufficient remaining disk space (19911409664 B)
[2026-03-09 22:24:57] 2026-03-09 21:24:05,205 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-09 22:24:57] 2026-03-09 21:24:05,205 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7045790579/HITS.48997948._000685.pool.root.1 since it does not exist
[2026-03-09 22:24:57] 2026-03-09 21:24:05,533 | INFO     | --- collectZombieJob: --- 10, [2312522]
[2026-03-09 22:24:57] 2026-03-09 21:24:05,534 | INFO     | zombie collector waiting for pid 2312522
[2026-03-09 22:24:57] 2026-03-09 21:24:05,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 22:24:57] 2026-03-09 21:24:05,534 | INFO     | collected zombie processes
[2026-03-09 22:24:57] 2026-03-09 21:24:05,534 | INFO     | will attempt to kill all subprocesses of pid=2312522
[2026-03-09 22:24:57] 2026-03-09 21:24:05,875 | INFO     | number of running child processes to parent process 2312522: 1
[2026-03-09 22:24:57] 2026-03-09 21:24:05,875 | INFO     | maximum number of monitored processes: 6
[2026-03-09 22:24:57] 2026-03-09 21:24:05,876 | INFO     | aborting job monitoring since job object (job id=7045790579) has expired
[2026-03-09 22:24:57] 2026-03-09 21:24:06,176 | INFO     | process IDs to be killed: [2312522] (in reverse order)
[2026-03-09 22:24:57] 2026-03-09 21:24:06,396 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 22:24:57] 2026-03-09 21:24:06,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 22:24:57] 2026-03-09 21:24:06,423 | INFO     | did not find any defunct processes belonging to 2312522
[2026-03-09 22:24:57] 2026-03-09 21:24:06,449 | INFO     | did not find any defunct processes belonging to 2312522
[2026-03-09 22:24:57] 2026-03-09 21:24:06,450 | INFO     | ready for new job
[2026-03-09 22:24:57] 2026-03-09 21:24:06,450 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 22:24:57] 2026-03-09 21:24:06,451 | INFO     | **************************************
[2026-03-09 22:24:57] 2026-03-09 21:24:06,451 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 22:24:57] 2026-03-09 21:24:06,451 | INFO     | **************************************
[2026-03-09 22:24:57] 2026-03-09 21:24:06,451 | INFO     | 
[2026-03-09 22:24:57] 2026-03-09 21:24:06,458 | INFO     | architecture information:
[2026-03-09 22:24:57] 2026-03-09 21:24:06,458 | INFO     | executing command: cat /etc/os-release
[2026-03-09 22:24:57] 2026-03-09 21:24:06,471 | INFO     | cat /etc/os-release:
[2026-03-09 22:24:57] NAME="CentOS Linux"
[2026-03-09 22:24:57] VERSION="7 (Core)"
[2026-03-09 22:24:57] ID="centos"
[2026-03-09 22:24:57] ID_LIKE="rhel fedora"
[2026-03-09 22:24:57] VERSION_ID="7"
[2026-03-09 22:24:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 22:24:57] ANSI_COLOR="0;31"
[2026-03-09 22:24:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 22:24:57] HOME_URL="https://www.centos.org/"
[2026-03-09 22:24:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 22:24:57] 
[2026-03-09 22:24:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 22:24:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 22:24:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 22:24:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 22:24:57] 
[2026-03-09 22:24:57] 2026-03-09 21:24:06,471 | INFO     | **************************************
[2026-03-09 22:24:57] 2026-03-09 21:24:06,974 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-03-09 22:24:57] 2026-03-09 21:24:06,991 | INFO     | sufficient remaining disk space (19911409664 B)
[2026-03-09 22:24:57] 2026-03-09 21:24:06,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 22:24:57] 2026-03-09 21:24:06,991 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 22:24:57] 2026-03-09 21:24:06,991 | INFO     | update_server=False
[2026-03-09 22:24:57] 2026-03-09 21:24:06,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 22:24:57] 2026-03-09 21:24:06,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 22:24:57] 2026-03-09 21:24:06,991 | INFO     | aborting loop
[2026-03-09 22:24:57] 2026-03-09 21:24:07,100 | INFO     | all payload control threads have been joined
[2026-03-09 22:24:57] 2026-03-09 21:24:07,226 | INFO     | all job control threads have been joined
[2026-03-09 22:24:57] 2026-03-09 21:24:07,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 22:24:57] 2026-03-09 21:24:07,805 | INFO     | all data control threads have been joined
[2026-03-09 22:24:57] 2026-03-09 21:24:07,996 | INFO     | [job] retrieve thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:07,997 | INFO     | [job] job monitor thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:08,003 | INFO     | job.realtimelogging is not enabled
[2026-03-09 22:24:57] 2026-03-09 21:24:08,072 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:08,105 | INFO     | [payload] control thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:08,231 | INFO     | [job] control thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:08,533 | INFO     | [data] copytool_in thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:08,621 | INFO     | [payload] failed_post thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:08,776 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:08,809 | INFO     | [data] control thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:09,008 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:09,196 | INFO     | [payload] validate_post thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:09,378 | INFO     | [data] copytool_out thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:09,435 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:09,444 | INFO     | [job] validate thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:09,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 22:24:57] 2026-03-09 21:24:10,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 22:24:57] 2026-03-09 21:24:10,518 | INFO     | [job] queue monitor thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:14,435 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 22:24:57] 2026-03-09 21:24:36,208 | INFO     | PID=2306554 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 22:24:57] 2026-03-09 21:24:36,208 | INFO     | .. there are 59 such processes running
[2026-03-09 22:24:57] 2026-03-09 21:24:36,208 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 22:24:57] 2026-03-09 21:24:36,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 22:24:57] 2026-03-09 21:24:36,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 22:24:57] 2026-03-09 21:24:51,410 | INFO     | [monitor] cgroup control has ended
[2026-03-09 22:24:57] 2026-03-09 21:24:52,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22507888498496)>', '<ExcThread(monitor, started 22507645306624)>']
[2026-03-09 22:24:57] 2026-03-09 21:24:53,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 22:24:57] 2026-03-09 21:24:53,293 | INFO     | [monitor] control thread has ended
[2026-03-09 22:24:57] 2026-03-09 21:24:57,552 | INFO     | all workflow threads have been joined
[2026-03-09 22:24:57] 2026-03-09 21:24:57,552 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 22:24:57] 2026-03-09 21:24:57,552 | INFO     | traces error code: 0
[2026-03-09 22:24:57] 2026-03-09 21:24:57,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 22:24:57] 2026-03-09 21:24:57,715 [wrapper] ==== pilot stdout END ====
[2026-03-09 22:24:57] 2026-03-09 21:24:57,717 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 22:24:57] 2026-03-09 21:24:57,719 [wrapper] pilotpid: 2306554
[2026-03-09 22:24:57] 2026-03-09 21:24:57,721 [wrapper] Pilot exit status: 0
[2026-03-09 22:24:57] 2026-03-09 21:24:57,728 [wrapper] pandaids: 7045790579
[2026-03-09 22:24:57] 2026-03-09 21:24:57,837 [wrapper] cleanup supervisor_pilot 3230827 2306555
[2026-03-09 22:24:57] 2026-03-09 21:24:57,840 [wrapper] Test setup, not cleaning
[2026-03-09 22:24:57] 2026-03-09 21:24:57,843 [wrapper] apfmon messages muted
[2026-03-09 22:24:57] 2026-03-09 21:24:57,846 [wrapper] ==== wrapper stdout END ====
[2026-03-09 22:24:57] 2026-03-09 21:24:57,848 [wrapper] ==== wrapper stderr END ====
[2026-03-09 22:24:57]  *** Error codes and diagnostics ***
[2026-03-09 22:24:57]     "exeErrorCode": 0,
[2026-03-09 22:24:57]     "exeErrorDiag": "",
[2026-03-09 22:24:57]     "pilotErrorCode": 0,
[2026-03-09 22:24:57]     "pilotErrorDiag": "",
[2026-03-09 22:24:57]  *** Listing of results directory ***
[2026-03-09 22:24:57] total 561704
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc    584627 Mar  8 04:14 pilot3.tar.gz
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc      5111 Mar  8 04:15 queuedata.json
[2026-03-09 22:24:57] -rwx------. 1 boinc boinc     36322 Mar  8 04:15 runpilot2-wrapper.sh
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc       100 Mar  9 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 22:24:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 20:40 run_atlas
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc       105 Mar  9 20:40 job.xml
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc      6709 Mar  9 20:40 init_data.xml
[2026-03-09 22:24:57] -rw-r--r--. 2 boinc boinc 328186089 Mar  9 20:40 EVNT.48997945._000028.pool.root.1
[2026-03-09 22:24:57] -rw-r--r--. 2 boinc boinc     15845 Mar  9 20:40 start_atlas.sh
[2026-03-09 22:24:57] drwxrwx--x. 2 boinc boinc      4096 Mar  9 20:40 shared
[2026-03-09 22:24:57] -rw-r--r--. 2 boinc boinc    597948 Mar  9 20:40 input.tar.gz
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc         0 Mar  9 20:40 boinc_lockfile
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc      2569 Mar  9 20:40 pandaJob.out
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc   1002746 Mar  9 20:40 agis_schedconf.cvmfs.json
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc   1511578 Mar  9 20:40 agis_ddmendpoints.agis.ALL.json
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc       442 Mar  9 20:40 workernode_map.json
[2026-03-09 22:24:57] drwx------. 5 boinc boinc      4096 Mar  9 20:40 pilot3
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc 240700464 Mar  9 22:23 HITS.48997948._000685.pool.root.1
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc        95 Mar  9 22:23 pilot_heartbeat.json
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc      1043 Mar  9 22:24 memory_monitor_summary.json
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc       529 Mar  9 22:24 boinc_task_state.xml
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc    286116 Mar  9 22:24 log.48997948._000685.job.log.tgz.1
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc      6342 Mar  9 22:24 heartbeat.json
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc      8192 Mar  9 22:24 boinc_mmap_file
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc        27 Mar  9 22:24 wrapper_checkpoint.txt
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc      4902 Mar  9 22:24 pilotlog.txt
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc    899572 Mar  9 22:24 log.48997948._000685.job.log.1
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc       357 Mar  9 22:24 output.list
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc       620 Mar  9 22:24 runtime_log
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc   1198080 Mar  9 22:24 result.tar.gz
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc       662 Mar  9 22:24 PbMKDmTnJJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7wXLDmwRErMn.diag
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc      9221 Mar  9 22:24 runtime_log.err
[2026-03-09 22:24:57] -rw-r--r--. 1 boinc boinc     21233 Mar  9 22:24 stderr.txt
[2026-03-09 22:24:57] HITS file was successfully produced:
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc 240700464 Mar  9 22:23 shared/HITS.pool.root.1
[2026-03-09 22:24:57]  *** Contents of shared directory: ***
[2026-03-09 22:24:57] total 557336
[2026-03-09 22:24:57] -rw-r--r--. 2 boinc boinc 328186089 Mar  9 20:40 ATLAS.root_0
[2026-03-09 22:24:57] -rw-r--r--. 2 boinc boinc     15845 Mar  9 20:40 start_atlas.sh
[2026-03-09 22:24:57] -rw-r--r--. 2 boinc boinc    597948 Mar  9 20:40 input.tar.gz
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc 240700464 Mar  9 22:23 HITS.pool.root.1
[2026-03-09 22:24:57] -rw-------. 1 boinc boinc   1198080 Mar  9 22:24 result.tar.gz
22:24:59 (2301851): run_atlas exited; CPU time 24074.244221
22:24:59 (2301851): called boinc_finish(0)

</stderr_txt>
]]>

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