Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:26:24 (2731826): wrapper (7.7.26015): starting
02:26:24 (2731826): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 02:26:24] Arguments: --nthreads 4
[2026-03-09 02:26:24] Threads: 4
[2026-03-09 02:26:24] Checking for CVMFS
[2026-03-09 02:26:24] No cvmfs_config command found, will try listing directly
[2026-03-09 02:26:24] CVMFS is ok
[2026-03-09 02:26:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 02:26:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 02:26:24] Further information can be found at the LHC@home message board.
[2026-03-09 02:26:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 02:26:24] Checking for apptainer binary...
[2026-03-09 02:26:24] which: no apptainer in ((null))
[2026-03-09 02:26:24] apptainer is not installed, using version from CVMFS
[2026-03-09 02:26:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 02:26:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-09 02:26:24] apptainer works
[2026-03-09 02:26:24] Set ATHENA_PROC_NUMBER=4
[2026-03-09 02:26:24] Set ATHENA_CORE_NUMBER=4
[2026-03-09 02:26:24] Starting ATLAS job with PandaID=7039300899
[2026-03-09 02:26:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 03:50:45]  *** The last 200 lines of the pilot log: ***
[2026-03-09 03:50:45]  protocol_id=None
[2026-03-09 03:50:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 03:50:45]  replicas=None
[2026-03-09 03:50:45]  scope=mc23_13p6TeV
[2026-03-09 03:50:45]  status=None
[2026-03-09 03:50:45]  status_code=0
[2026-03-09 03:50:45]  storage_token=
[2026-03-09 03:50:45]  surl=/var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7039300899/log.48955010._013047.job.log.tgz.1
[2026-03-09 03:50:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/ae/log.48955010._013047.job.log.tgz.1
[2026-03-09 03:50:45]  workdir=None
[2026-03-09 03:50:45] ]
[2026-03-09 03:50:45] 2026-03-09 02:49:06,779 | INFO     | time since job start (4949s) is within the limit (349056.0s)
[2026-03-09 03:50:45] 2026-03-09 02:49:06,792 | INFO     | transferring file log.48955010._013047.job.log.tgz.1 from /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7039300899/log.48955010._013047.job.log.tgz.1 to /var/lib/
[2026-03-09 03:50:45] 2026-03-09 02:49:06,792 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7039300899/log.48955010._013047.job.log.tgz.1 /var/lib/boinc/var/slot100/slots/1/
[2026-03-09 03:50:45] 2026-03-09 02:49:06,806 | INFO     | adding to output.list: log.48955010._013047.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/ae/log.48955010._013047.job.log.tg
[2026-03-09 03:50:45] 2026-03-09 02:49:06,806 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 03:50:45] 2026-03-09 02:49:06,806 | INFO     | summary of transferred files:
[2026-03-09 03:50:45] 2026-03-09 02:49:06,806 | INFO     |  -- lfn=log.48955010._013047.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 03:50:45] 2026-03-09 02:49:06,807 | INFO     | stage-out finished correctly
[2026-03-09 03:50:45] 2026-03-09 02:49:07,662 | WARNING  | process 2762638 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 03:50:45] 2026-03-09 02:49:07,662 | INFO     | using path: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7039300899/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 03:50:45] 2026-03-09 02:49:08,100 | INFO     | number of running child processes to parent process 2762638: 1
[2026-03-09 03:50:45] 2026-03-09 02:49:08,100 | INFO     | maximum number of monitored processes: 6
[2026-03-09 03:50:45] 2026-03-09 02:49:08,580 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 03:50:45] 2026-03-09 02:49:08,797 | INFO     | time since job start (4951s) is within the limit (349056.0s)
[2026-03-09 03:50:45] 2026-03-09 02:49:10,398 | INFO     | PID=2745751 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 03:50:45] 2026-03-09 02:49:10,398 | INFO     | .. there are 42 such processes running
[2026-03-09 03:50:45] 2026-03-09 02:49:10,603 | INFO     | monitor loop #355: job 0:7039300899 is in state 'finished'
[2026-03-09 03:50:45] 2026-03-09 02:49:10,603 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 03:50:45] 2026-03-09 02:49:10,937 | INFO     | job 7039300899 has state=finished
[2026-03-09 03:50:45] 2026-03-09 02:49:10,938 | INFO     | preparing for final server update for job 7039300899 in state='finished'
[2026-03-09 03:50:45] 2026-03-09 02:49:10,938 | INFO     | reading metadata from: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7039300899/jobReport.json
[2026-03-09 03:50:45] 2026-03-09 02:49:10,939 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot100/slots/1/workernode_map.json
[2026-03-09 03:50:45] 2026-03-09 02:49:10,940 | INFO     | this job has now completed (state=finished)
[2026-03-09 03:50:45] 2026-03-09 02:49:10,940 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 03:50:45] 2026-03-09 02:49:10,940 | INFO     | log transfer has been attempted: DONE
[2026-03-09 03:50:45] 2026-03-09 02:49:10,940 | INFO     | job 7039300899 has finished - writing final server update
[2026-03-09 03:50:45] 2026-03-09 02:49:10,940 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_878023/.job.ad'
[2026-03-09 03:50:45] 2026-03-09 02:49:10,940 | INFO     | total number of processed events: 400 (read)
[2026-03-09 03:50:45] 2026-03-09 02:49:10,958 | INFO     | using path: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7039300899/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 03:50:45] 2026-03-09 02:49:10,958 | INFO     | extracted standard info from prmon json
[2026-03-09 03:50:45] 2026-03-09 02:49:10,958 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 03:50:45] 2026-03-09 02:49:10,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 03:50:45] 2026-03-09 02:49:10,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 03:50:45] 2026-03-09 02:49:10,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 03:50:45] 2026-03-09 02:49:10,959 | INFO     | fitting pss+swap vs Time
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | sum of square deviations: 125630262.5
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | sum of deviations: -395714838.4999999
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | mean x: 1773022149.5
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | mean y: 2335819.9324324327
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | intersect: 5587066438.053326
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | chi2: 0.0007586962369750234
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | current memory leak: -3.15 B/s (using 74 data points, chi2=0.00)
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | could have reported an average CPU frequency of 3544 MHz (6 samples)
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | ..............................
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | . Timing measurements:
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | . get job = 0 s
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | . initial setup = 5 s
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | . payload setup = 5 s
[2026-03-09 03:50:45] 2026-03-09 02:49:10,960 | INFO     | . stage-in = 0 s
[2026-03-09 03:50:45] 2026-03-09 02:49:10,961 | INFO     | . payload execution = 4928 s
[2026-03-09 03:50:45] 2026-03-09 02:49:10,961 | INFO     | . stage-out = 0 s
[2026-03-09 03:50:45] 2026-03-09 02:49:10,961 | INFO     | . log creation = 0 s
[2026-03-09 03:50:45] 2026-03-09 02:49:10,961 | INFO     | ..............................
[2026-03-09 03:50:45] 2026-03-09 02:49:11,011 | INFO     | 
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | job summary report
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | --------------------------------------------------
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | PanDA job id: 7039300899
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | task id: 48955010
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | errors: (none)
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | pilot state: finished 
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | transexitcode: 0
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | exeerrorcode: 0
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | exeerrordiag: 
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | exitcode: 0
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | exitmsg: OK
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | cpuconsumptiontime: 18759 s
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | nevents: 400
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | neventsw: 0
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | pid: 2762638
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | pgrp: 2762638
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | corecount: 4
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | event service: False
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | sizes: {0: 2279929, 1: 2280191, 11: 2280219, 4937: 2306590, 4938: 2306589, 4939: 2315667, 4940: 2315851, 4943: 2316045}
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | --------------------------------------------------
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | 
[2026-03-09 03:50:45] 2026-03-09 02:49:11,012 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/1
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 03:50:45] 2026-03-09 02:49:11,033 | INFO     | job 7039300899 has completed (purged errors)
[2026-03-09 03:50:45] 2026-03-09 02:49:11,034 | INFO     | overall cleanup function is called
[2026-03-09 03:50:45] 2026-03-09 02:49:12,041 | INFO     | --- collectZombieJob: --- 10, [2762638]
[2026-03-09 03:50:45] 2026-03-09 02:49:12,041 | INFO     | zombie collector waiting for pid 2762638
[2026-03-09 03:50:45] 2026-03-09 02:49:12,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 03:50:45] 2026-03-09 02:49:12,041 | INFO     | collected zombie processes
[2026-03-09 03:50:45] 2026-03-09 02:49:12,041 | INFO     | will attempt to kill all subprocesses of pid=2762638
[2026-03-09 03:50:45] 2026-03-09 02:49:12,536 | INFO     | process IDs to be killed: [2762638] (in reverse order)
[2026-03-09 03:50:45] 2026-03-09 02:49:12,751 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 03:50:45] 2026-03-09 02:49:12,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 03:50:45] 2026-03-09 02:49:12,782 | INFO     | did not find any defunct processes belonging to 2762638
[2026-03-09 03:50:45] 2026-03-09 02:49:12,813 | INFO     | did not find any defunct processes belonging to 2762638
[2026-03-09 03:50:45] 2026-03-09 02:49:12,814 | INFO     | ready for new job
[2026-03-09 03:50:45] 2026-03-09 02:49:12,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 03:50:45] 2026-03-09 02:49:12,815 | INFO     | **************************************
[2026-03-09 03:50:45] 2026-03-09 02:49:12,818 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 03:50:45] 2026-03-09 02:49:12,818 | INFO     | **************************************
[2026-03-09 03:50:45] 2026-03-09 02:49:12,818 | INFO     | 
[2026-03-09 03:50:45] 2026-03-09 02:49:12,824 | INFO     | architecture information:
[2026-03-09 03:50:45] 2026-03-09 02:49:12,825 | INFO     | executing command: cat /etc/os-release
[2026-03-09 03:50:45] 2026-03-09 02:49:12,841 | INFO     | cat /etc/os-release:
[2026-03-09 03:50:45] NAME="CentOS Linux"
[2026-03-09 03:50:45] VERSION="7 (Core)"
[2026-03-09 03:50:45] ID="centos"
[2026-03-09 03:50:45] ID_LIKE="rhel fedora"
[2026-03-09 03:50:45] VERSION_ID="7"
[2026-03-09 03:50:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 03:50:45] ANSI_COLOR="0;31"
[2026-03-09 03:50:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 03:50:45] HOME_URL="https://www.centos.org/"
[2026-03-09 03:50:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 03:50:45] 
[2026-03-09 03:50:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 03:50:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 03:50:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 03:50:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 03:50:45] 
[2026-03-09 03:50:45] 2026-03-09 02:49:12,842 | INFO     | **************************************
[2026-03-09 03:50:45] 2026-03-09 02:49:13,345 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/1
[2026-03-09 03:50:45] 2026-03-09 02:49:13,360 | INFO     | sufficient remaining disk space (21804089344 B)
[2026-03-09 03:50:45] 2026-03-09 02:49:13,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 03:50:45] 2026-03-09 02:49:13,361 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 03:50:45] 2026-03-09 02:49:13,361 | INFO     | update_server=False
[2026-03-09 03:50:45] 2026-03-09 02:49:13,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 03:50:45] 2026-03-09 02:49:13,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 03:50:45] 2026-03-09 02:49:13,813 | INFO     | all job control threads have been joined
[2026-03-09 03:50:45] 2026-03-09 02:49:14,111 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 03:50:45] 2026-03-09 02:49:14,111 | INFO     | aborting loop
[2026-03-09 03:50:45] 2026-03-09 02:49:14,221 | INFO     | all data control threads have been joined
[2026-03-09 03:50:45] 2026-03-09 02:49:14,366 | INFO     | [job] retrieve thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:14,372 | INFO     | [job] validate thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:14,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 03:50:45] 2026-03-09 02:49:14,639 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:14,704 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:14,818 | INFO     | [job] control thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:14,825 | INFO     | all payload control threads have been joined
[2026-03-09 03:50:45] 2026-03-09 02:49:14,840 | INFO     | [payload] validate_post thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:15,000 | INFO     | [data] copytool_in thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:15,116 | INFO     | [job] job monitor thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:15,226 | INFO     | [data] control thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:15,346 | INFO     | [payload] failed_post thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:15,366 | INFO     | [data] copytool_out thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:15,795 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:15,830 | INFO     | [payload] control thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:16,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 03:50:45] 2026-03-09 02:49:17,026 | INFO     | [job] queue monitor thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:18,637 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:23,702 | INFO     | job.realtimelogging is not enabled
[2026-03-09 03:50:45] 2026-03-09 02:49:24,707 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 03:50:45] 2026-03-09 02:49:42,865 | INFO     | PID=2745751 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 03:50:45] 2026-03-09 02:49:42,868 | INFO     | .. there are 47 such processes running
[2026-03-09 03:50:45] 2026-03-09 02:49:42,868 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 03:50:45] 2026-03-09 02:49:42,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 03:50:45] 2026-03-09 02:49:42,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 03:50:45] 2026-03-09 02:49:45,136 | INFO     | [monitor] cgroup control has ended
[2026-03-09 03:50:45] 2026-03-09 02:49:46,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23154567747392)>', '<ExcThread(monitor, started 23154325198592)>']
[2026-03-09 03:50:45] 2026-03-09 02:49:47,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 03:50:45] 2026-03-09 02:49:47,893 | INFO     | [monitor] control thread has ended
[2026-03-09 03:50:45] 2026-03-09 02:49:51,948 | INFO     | all workflow threads have been joined
[2026-03-09 03:50:45] 2026-03-09 02:49:51,948 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 03:50:45] 2026-03-09 02:49:51,948 | INFO     | traces error code: 0
[2026-03-09 03:50:45] 2026-03-09 02:49:51,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 03:50:45] 2026-03-09 02:49:52,124 [wrapper] ==== pilot stdout END ====
[2026-03-09 03:50:45] 2026-03-09 02:49:52,127 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 03:50:45] 2026-03-09 02:49:52,129 [wrapper] pilotpid: 2745751
[2026-03-09 03:50:45] 2026-03-09 02:49:52,132 [wrapper] Pilot exit status: 0
[2026-03-09 03:50:45] 2026-03-09 02:49:52,140 [wrapper] pandaids: 7039300899
[2026-03-09 03:50:45] 2026-03-09 02:49:52,280 [wrapper] cleanup supervisor_pilot 3340663 2745753
[2026-03-09 03:50:45] 2026-03-09 02:49:52,283 [wrapper] Test setup, not cleaning
[2026-03-09 03:50:45] 2026-03-09 02:49:52,286 [wrapper] apfmon messages muted
[2026-03-09 03:50:45] 2026-03-09 02:49:52,288 [wrapper] ==== wrapper stdout END ====
[2026-03-09 03:50:45] 2026-03-09 02:49:52,291 [wrapper] ==== wrapper stderr END ====
[2026-03-09 03:50:45]  *** Error codes and diagnostics ***
[2026-03-09 03:50:45]     "exeErrorCode": 0,
[2026-03-09 03:50:45]     "exeErrorDiag": "",
[2026-03-09 03:50:45]     "pilotErrorCode": 0,
[2026-03-09 03:50:45]     "pilotErrorDiag": "",
[2026-03-09 03:50:45]  *** Listing of results directory ***
[2026-03-09 03:50:45] total 619996
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc    584627 Mar  7 23:32 pilot3.tar.gz
[2026-03-09 03:50:45] -rwx------. 1 boinc boinc     36322 Mar  7 23:35 runpilot2-wrapper.sh
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc      5111 Mar  7 23:36 queuedata.json
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc       100 Mar  9 02:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 03:50:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 02:26 run_atlas
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc       105 Mar  9 02:26 job.xml
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc      6708 Mar  9 02:26 init_data.xml
[2026-03-09 03:50:45] -rw-r--r--. 2 boinc boinc 444543236 Mar  9 02:26 EVNT.46701403._001261.pool.root.1
[2026-03-09 03:50:45] -rw-r--r--. 2 boinc boinc     15845 Mar  9 02:26 start_atlas.sh
[2026-03-09 03:50:45] drwxrwx--x. 2 boinc boinc      4096 Mar  9 02:26 shared
[2026-03-09 03:50:45] -rw-r--r--. 2 boinc boinc    597957 Mar  9 02:26 input.tar.gz
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc         0 Mar  9 02:26 boinc_lockfile
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc      2563 Mar  9 02:26 pandaJob.out
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc    999108 Mar  9 02:26 agis_schedconf.cvmfs.json
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc   1511578 Mar  9 02:26 agis_ddmendpoints.agis.ALL.json
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc       444 Mar  9 02:26 workernode_map.json
[2026-03-09 03:50:45] drwx------. 5 boinc boinc      4096 Mar  9 02:26 pilot3
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc 184351427 Mar  9 03:48 HITS.48955010._013047.pool.root.1
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc        95 Mar  9 03:48 pilot_heartbeat.json
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc       530 Mar  9 03:48 boinc_task_state.xml
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc      1031 Mar  9 03:49 memory_monitor_summary.json
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc    299178 Mar  9 03:49 log.48955010._013047.job.log.tgz.1
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc      6357 Mar  9 03:49 heartbeat.json
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc      4902 Mar  9 03:49 pilotlog.txt
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc    722679 Mar  9 03:49 log.48955010._013047.job.log.1
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc       357 Mar  9 03:49 output.list
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc       620 Mar  9 03:49 runtime_log
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc   1044480 Mar  9 03:49 result.tar.gz
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc       661 Mar  9 03:49 xi5MDm4PFJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmc2ULDmKXTHTm.diag
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc      9221 Mar  9 03:49 runtime_log.err
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc        27 Mar  9 03:50 wrapper_checkpoint.txt
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc      8192 Mar  9 03:50 boinc_mmap_file
[2026-03-09 03:50:45] -rw-r--r--. 1 boinc boinc     21808 Mar  9 03:50 stderr.txt
[2026-03-09 03:50:45] HITS file was successfully produced:
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc 184351427 Mar  9 03:48 shared/HITS.pool.root.1
[2026-03-09 03:50:45]  *** Contents of shared directory: ***
[2026-03-09 03:50:45] total 615788
[2026-03-09 03:50:45] -rw-r--r--. 2 boinc boinc 444543236 Mar  9 02:26 ATLAS.root_0
[2026-03-09 03:50:45] -rw-r--r--. 2 boinc boinc     15845 Mar  9 02:26 start_atlas.sh
[2026-03-09 03:50:45] -rw-r--r--. 2 boinc boinc    597957 Mar  9 02:26 input.tar.gz
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc 184351427 Mar  9 03:48 HITS.pool.root.1
[2026-03-09 03:50:45] -rw-------. 1 boinc boinc   1044480 Mar  9 03:49 result.tar.gz
03:50:46 (2731826): run_atlas exited; CPU time 18977.721800
03:50:46 (2731826): called boinc_finish(0)

</stderr_txt>
]]>

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