Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:05:39 (556471): wrapper (7.7.26015): starting
03:05:39 (556471): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 03:05:39] Arguments: --nthreads 8
[2026-03-08 03:05:39] Threads: 8
[2026-03-08 03:05:39] Checking for CVMFS
[2026-03-08 03:05:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 03:05:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 03:05:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 03:05:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 03:05:41] 2.13.3.0 12357 176560 309636 157030 2 713 26289925 32503808 35468 16776704 0 2388301849 99.630 2283033234 46806 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-08 03:05:41] CVMFS is ok
[2026-03-08 03:05:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 03:05:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 03:05:41] Further information can be found at the LHC@home message board.
[2026-03-08 03:05:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 03:05:41] Checking for apptainer binary...
[2026-03-08 03:05:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 03:05:41] Running /usr/bin/apptainer --version
[2026-03-08 03:05:41] apptainer version 1.4.5-2.el9
[2026-03-08 03:05:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 03:05:42] c8-7-2.aglt2.org
[2026-03-08 03:05:42] apptainer works
[2026-03-08 03:05:42] Set ATHENA_PROC_NUMBER=8
[2026-03-08 03:05:42] Set ATHENA_CORE_NUMBER=8
[2026-03-08 03:05:42] Starting ATLAS job with PandaID=7039300861
[2026-03-08 03:05:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:40:10 (556471): BOINC client no longer exists - exiting
04:40:10 (556471): timer handler: client dead, exiting
04:47:24 (2205780): wrapper (7.7.26015): starting
04:47:24 (2205780): wrapper: running run_atlas (--nthreads 10)
[2026-03-08 04:47:24] Arguments: --nthreads 10
[2026-03-08 04:47:24] Threads: 10
[2026-03-08 04:47:24] This job has been restarted, cleaning up previous attempt
[2026-03-08 04:47:24] Checking for CVMFS
[2026-03-08 04:47:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 04:47:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 04:47:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 04:47:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 04:47:25] 2.13.3.0 12357 176662 282212 157033 1 193 28516753 32503809 28708 16776704 0 2388645555 99.630 2284388250 46821 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-08 04:47:25] CVMFS is ok
[2026-03-08 04:47:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 04:47:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 04:47:25] Further information can be found at the LHC@home message board.
[2026-03-08 04:47:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 04:47:25] Checking for apptainer binary...
[2026-03-08 04:47:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 04:47:25] Running /usr/bin/apptainer --version
[2026-03-08 04:47:25] apptainer version 1.4.5-2.el9
[2026-03-08 04:47:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 04:47:25] c8-7-2.aglt2.org
[2026-03-08 04:47:25] apptainer works
[2026-03-08 04:47:25] Set ATHENA_PROC_NUMBER=10
[2026-03-08 04:47:25] Set ATHENA_CORE_NUMBER=10
[2026-03-08 04:47:26] Starting ATLAS job with PandaID=7039300861
[2026-03-08 04:47:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 07:07:15]  *** The last 200 lines of the pilot log: ***
[2026-03-08 07:07:15] 2026-03-08 11:06:14,908 | INFO     | log transfer has been attempted: DONE
[2026-03-08 07:07:15] 2026-03-08 11:06:14,908 | INFO     | job 7039300861 has finished - writing final server update
[2026-03-08 07:07:15] 2026-03-08 11:06:14,908 | INFO     | total number of processed events: 400 (read)
[2026-03-08 07:07:15] 2026-03-08 11:06:14,983 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7039300861/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 07:07:15] 2026-03-08 11:06:14,983 | INFO     | extracted standard info from prmon json
[2026-03-08 07:07:15] 2026-03-08 11:06:14,983 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 07:07:15] 2026-03-08 11:06:14,984 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 07:07:15] 2026-03-08 11:06:14,984 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 07:07:15] 2026-03-08 11:06:14,991 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 07:07:15] 2026-03-08 11:06:14,992 | INFO     | fitting pss+swap vs Time
[2026-03-08 07:07:15] 2026-03-08 11:06:14,993 | INFO     | sum of square deviations: 779950337.6397029
[2026-03-08 07:07:15] 2026-03-08 11:06:14,993 | INFO     | sum of deviations: 4940871778.779415
[2026-03-08 07:07:15] 2026-03-08 11:06:14,993 | INFO     | mean x: 1772963830.5514705
[2026-03-08 07:07:15] 2026-03-08 11:06:14,993 | INFO     | mean y: 2560928.6029411764
[2026-03-08 07:07:15] 2026-03-08 11:06:14,993 | INFO     | intersect: -11228906682.11444
[2026-03-08 07:07:15] 2026-03-08 11:06:14,993 | INFO     | chi2: 1.9886733854135366
[2026-03-08 07:07:15] 2026-03-08 11:06:14,994 | INFO     | sum of square deviations: 697048592.6259533
[2026-03-08 07:07:15] 2026-03-08 11:06:14,994 | INFO     | sum of deviations: 13854865617.786253
[2026-03-08 07:07:15] 2026-03-08 11:06:14,994 | INFO     | mean x: 1772963678.053435
[2026-03-08 07:07:15] 2026-03-08 11:06:14,994 | INFO     | mean y: 2576810.0305343512
[2026-03-08 07:07:15] 2026-03-08 11:06:14,994 | INFO     | intersect: -35237683000.41843
[2026-03-08 07:07:15] 2026-03-08 11:06:14,994 | INFO     | chi2: 1.200947298280212
[2026-03-08 07:07:15] 2026-03-08 11:06:14,994 | INFO     | current chi2=1.200947298280212 (change=39.61063153512863 %)
[2026-03-08 07:07:15] 2026-03-08 11:06:14,994 | INFO     | sum of square deviations: 620239985.1111133
[2026-03-08 07:07:15] 2026-03-08 11:06:14,995 | INFO     | sum of deviations: 13191759297.666674
[2026-03-08 07:07:15] 2026-03-08 11:06:15,035 | INFO     | mean x: 1772963525.5555556
[2026-03-08 07:07:15] 2026-03-08 11:06:15,035 | INFO     | mean y: 2575493.404761905
[2026-03-08 07:07:15] 2026-03-08 11:06:15,035 | INFO     | intersect: -37706228572.94616
[2026-03-08 07:07:15] 2026-03-08 11:06:15,035 | INFO     | chi2: 1.2024835857899012
[2026-03-08 07:07:15] 2026-03-08 11:06:15,035 | INFO     | current chi2=1.2024835857899012 (change=-0.12792297479574274 %)
[2026-03-08 07:07:15] 2026-03-08 11:06:15,035 | INFO     | right removable region: 125
[2026-03-08 07:07:15] 2026-03-08 11:06:15,035 | INFO     | sum of square deviations: 697044322.6259533
[2026-03-08 07:07:15] 2026-03-08 11:06:15,049 | INFO     | sum of deviations: -11549515211.213741
[2026-03-08 07:07:15] 2026-03-08 11:06:15,049 | INFO     | mean x: 1772963983.053435
[2026-03-08 07:07:15] 2026-03-08 11:06:15,049 | INFO     | mean y: 2590609.0305343512
[2026-03-08 07:07:15] 2026-03-08 11:06:15,049 | INFO     | intersect: 29379308597.447483
[2026-03-08 07:07:15] 2026-03-08 11:06:15,049 | INFO     | chi2: 0.8219662922747353
[2026-03-08 07:07:15] 2026-03-08 11:06:15,049 | INFO     | current chi2=0.8219662922747353 (change=58.667607345496265 %)
[2026-03-08 07:07:15] 2026-03-08 11:06:15,049 | INFO     | sum of square deviations: 620231445.1111133
[2026-03-08 07:07:15] 2026-03-08 11:06:15,050 | INFO     | sum of deviations: -10868671733.888887
[2026-03-08 07:07:15] 2026-03-08 11:06:15,050 | INFO     | mean x: 1772964135.5555556
[2026-03-08 07:07:15] 2026-03-08 11:06:15,050 | INFO     | mean y: 2589249.76984127
[2026-03-08 07:07:15] 2026-03-08 11:06:15,050 | INFO     | intersect: 31071257788.268833
[2026-03-08 07:07:15] 2026-03-08 11:06:15,050 | INFO     | chi2: 0.8226857862973967
[2026-03-08 07:07:15] 2026-03-08 11:06:15,050 | INFO     | current chi2=0.8226857862973967 (change=-0.08753327592915285 %)
[2026-03-08 07:07:15] 2026-03-08 11:06:15,050 | INFO     | left removable region: 20
[2026-03-08 07:07:15] 2026-03-08 11:06:15,050 | INFO     | sum of square deviations: 358929372.7619043
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | sum of deviations: -444403848.0000004
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | mean x: 1772964105.047619
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | mean y: 2603013.4
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | intersect: 2197776020.7974753
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | chi2: 0.0046370828143558075
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | current memory leak: -1.24 B/s (using 105 data points, chi2=0.00)
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | ..............................
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | . Timing measurements:
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | . get job = 0 s
[2026-03-08 07:07:15] 2026-03-08 11:06:15,051 | INFO     | . initial setup = 1 s
[2026-03-08 07:07:15] 2026-03-08 11:06:15,052 | INFO     | . payload setup = 13 s
[2026-03-08 07:07:15] 2026-03-08 11:06:15,052 | INFO     | . stage-in = 0 s
[2026-03-08 07:07:15] 2026-03-08 11:06:15,052 | INFO     | . payload execution = 8261 s
[2026-03-08 07:07:15] 2026-03-08 11:06:15,052 | INFO     | . stage-out = 5 s
[2026-03-08 07:07:15] 2026-03-08 11:06:15,052 | INFO     | . log creation = 1 s
[2026-03-08 07:07:15] 2026-03-08 11:06:15,052 | INFO     | ..............................
[2026-03-08 07:07:15] 2026-03-08 11:06:15,249 | INFO     | 
[2026-03-08 07:07:15] 2026-03-08 11:06:15,249 | INFO     | job summary report
[2026-03-08 07:07:15] 2026-03-08 11:06:15,249 | INFO     | --------------------------------------------------
[2026-03-08 07:07:15] 2026-03-08 11:06:15,249 | INFO     | PanDA job id: 7039300861
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | task id: 48955010
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | errors: (none)
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | pilot state: finished 
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | transexitcode: 0
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | exeerrorcode: 0
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | exeerrordiag: 
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | exitcode: 0
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | exitmsg: OK
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | cpuconsumptiontime: 21557 s
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | nevents: 400
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | neventsw: 0
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | pid: 2252817
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | pgrp: 2252817
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | corecount: 10
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | event service: False
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | sizes: {0: 2294664, 1: 2295782, 11: 2295782, 8279: 2323478, 8287: 2332476, 8290: 2332532, 8291: 2332854}
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | --------------------------------------------------
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | 
[2026-03-08 07:07:15] 2026-03-08 11:06:15,250 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-08 07:07:15] 2026-03-08 11:06:15,267 | INFO     | time since job start (8302s) is within the limit (349056.0s)
[2026-03-08 07:07:15] 2026-03-08 11:06:15,290 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,290 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,290 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,290 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | job 7039300861 has completed (purged errors)
[2026-03-08 07:07:15] 2026-03-08 11:06:15,291 | INFO     | overall cleanup function is called
[2026-03-08 07:07:15] 2026-03-08 11:06:16,304 | INFO     | --- collectZombieJob: --- 10, [2252817]
[2026-03-08 07:07:15] 2026-03-08 11:06:16,304 | INFO     | zombie collector waiting for pid 2252817
[2026-03-08 07:07:15] 2026-03-08 11:06:16,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 07:07:15] 2026-03-08 11:06:16,304 | INFO     | collected zombie processes
[2026-03-08 07:07:15] 2026-03-08 11:06:16,304 | INFO     | will attempt to kill all subprocesses of pid=2252817
[2026-03-08 07:07:15] 2026-03-08 11:06:19,482 | INFO     | process IDs to be killed: [2252817] (in reverse order)
[2026-03-08 07:07:15] 2026-03-08 11:06:20,986 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 07:07:15] 2026-03-08 11:06:20,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 07:07:15] 2026-03-08 11:06:21,083 | INFO     | did not find any defunct processes belonging to 2252817
[2026-03-08 07:07:15] 2026-03-08 11:06:21,180 | INFO     | did not find any defunct processes belonging to 2252817
[2026-03-08 07:07:15] 2026-03-08 11:06:21,181 | INFO     | ready for new job
[2026-03-08 07:07:15] 2026-03-08 11:06:21,181 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 07:07:15] 2026-03-08 11:06:21,182 | INFO     | **************************************
[2026-03-08 07:07:15] 2026-03-08 11:06:21,182 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 07:07:15] 2026-03-08 11:06:21,182 | INFO     | **************************************
[2026-03-08 07:07:15] 2026-03-08 11:06:21,182 | INFO     | 
[2026-03-08 07:07:15] 2026-03-08 11:06:21,195 | INFO     | architecture information:
[2026-03-08 07:07:15] 2026-03-08 11:06:21,203 | INFO     | executing command: cat /etc/os-release
[2026-03-08 07:07:15] 2026-03-08 11:06:21,312 | INFO     | cat /etc/os-release:
[2026-03-08 07:07:15] NAME="CentOS Linux"
[2026-03-08 07:07:15] VERSION="7 (Core)"
[2026-03-08 07:07:15] ID="centos"
[2026-03-08 07:07:15] ID_LIKE="rhel fedora"
[2026-03-08 07:07:15] VERSION_ID="7"
[2026-03-08 07:07:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 07:07:15] ANSI_COLOR="0;31"
[2026-03-08 07:07:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 07:07:15] HOME_URL="https://www.centos.org/"
[2026-03-08 07:07:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 07:07:15] 
[2026-03-08 07:07:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 07:07:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 07:07:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 07:07:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 07:07:15] 
[2026-03-08 07:07:15] 2026-03-08 11:06:21,313 | INFO     | **************************************
[2026-03-08 07:07:15] 2026-03-08 11:06:21,816 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-08 07:07:15] 2026-03-08 11:06:21,885 | INFO     | sufficient remaining disk space (90339016704 B)
[2026-03-08 07:07:15] 2026-03-08 11:06:21,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 07:07:15] 2026-03-08 11:06:21,886 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 07:07:15] 2026-03-08 11:06:21,886 | INFO     | update_server=False
[2026-03-08 07:07:15] 2026-03-08 11:06:21,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 07:07:15] 2026-03-08 11:06:21,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 07:07:15] 2026-03-08 11:06:21,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 07:07:15] 2026-03-08 11:06:21,886 | INFO     | aborting loop
[2026-03-08 07:07:15] 2026-03-08 11:06:22,892 | INFO     | [job] retrieve thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:22,892 | INFO     | [job] job monitor thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:22,973 | INFO     | all job control threads have been joined
[2026-03-08 07:07:15] 2026-03-08 11:06:22,996 | INFO     | all data control threads have been joined
[2026-03-08 07:07:15] 2026-03-08 11:06:23,097 | INFO     | all payload control threads have been joined
[2026-03-08 07:07:15] 2026-03-08 11:06:23,299 | INFO     | [payload] failed_post thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:23,366 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:23,903 | INFO     | [data] copytool_out thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:23,979 | INFO     | [job] control thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:23,983 | INFO     | [job] validate thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:23,987 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:23,992 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:24,002 | INFO     | [data] control thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:24,013 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:24,025 | INFO     | [data] copytool_in thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:24,103 | INFO     | [payload] control thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:24,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 07:07:15] 2026-03-08 11:06:24,383 | INFO     | [payload] validate_post thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:24,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 07:07:15] 2026-03-08 11:06:25,329 | INFO     | [job] queue monitor thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:28,858 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 07:07:15] 2026-03-08 11:06:51,341 | INFO     | PID=2233864 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 07:07:15] 2026-03-08 11:06:51,341 | INFO     | .. there are 42 such processes running
[2026-03-08 07:07:15] 2026-03-08 11:06:51,342 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 07:07:15] 2026-03-08 11:06:51,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 07:07:15] 2026-03-08 11:06:51,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 07:07:15] 2026-03-08 11:07:07,402 | INFO     | [monitor] cgroup control has ended
[2026-03-08 07:07:15] 2026-03-08 11:07:08,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895291938624)>', '<ExcThread(monitor, started 139894659737344)>']
[2026-03-08 07:07:15] 2026-03-08 11:07:09,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 07:07:15] 2026-03-08 11:07:09,502 | INFO     | [monitor] control thread has ended
[2026-03-08 07:07:15] 2026-03-08 11:07:13,878 | INFO     | all workflow threads have been joined
[2026-03-08 07:07:15] 2026-03-08 11:07:13,878 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 07:07:15] 2026-03-08 11:07:13,878 | INFO     | traces error code: 0
[2026-03-08 07:07:15] 2026-03-08 11:07:13,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 07:07:15] 2026-03-08 11:07:14,231 [wrapper] ==== pilot stdout END ====
[2026-03-08 07:07:15] 2026-03-08 11:07:14,252 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 07:07:15] 2026-03-08 11:07:14,272 [wrapper] pilotpid: 2233864
[2026-03-08 07:07:15] 2026-03-08 11:07:14,305 [wrapper] Pilot exit status: 0
[2026-03-08 07:07:15] 2026-03-08 11:07:14,435 [wrapper] pandaids: 7039300861 7039300861
[2026-03-08 07:07:15] 2026-03-08 11:07:15,052 [wrapper] cleanup supervisor_pilot  422540 2233865
[2026-03-08 07:07:15] 2026-03-08 11:07:15,071 [wrapper] Test setup, not cleaning
[2026-03-08 07:07:15] 2026-03-08 11:07:15,114 [wrapper] apfmon messages muted
[2026-03-08 07:07:15] 2026-03-08 11:07:15,130 [wrapper] ==== wrapper stdout END ====
[2026-03-08 07:07:15] 2026-03-08 11:07:15,141 [wrapper] ==== wrapper stderr END ====
[2026-03-08 07:07:15]  *** Error codes and diagnostics ***
[2026-03-08 07:07:15]     "exeErrorCode": 0,
[2026-03-08 07:07:15]     "exeErrorDiag": "",
[2026-03-08 07:07:15]     "pilotErrorCode": 0,
[2026-03-08 07:07:15]     "pilotErrorDiag": "",
[2026-03-08 07:07:15]  *** Listing of results directory ***
[2026-03-08 07:07:15] total 1059332
[2026-03-08 07:07:15] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas    584627 Mar  7 17:32 pilot3.tar.gz
[2026-03-08 07:07:15] -rwx------. 1 boincer umatlas     36322 Mar  7 17:35 runpilot2-wrapper.sh
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas      5111 Mar  7 17:36 queuedata.json
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas       100 Mar  8 03:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 07:07:15] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 03:05 run_atlas
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas       105 Mar  8 03:05 job.xml
[2026-03-08 07:07:15] -rw-r--r--. 3 boincer umatlas 445982392 Mar  8 03:05 EVNT.46701403._001260.pool.root.1
[2026-03-08 07:07:15] -rw-r--r--. 3 boincer umatlas 445982392 Mar  8 03:05 ATLAS.root_0
[2026-03-08 07:07:15] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 03:05 start_atlas.sh
[2026-03-08 07:07:15] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 03:05 shared
[2026-03-08 07:07:15] -rw-r--r--. 2 boincer umatlas    597956 Mar  8 03:05 input.tar.gz
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas         0 Mar  8 03:05 boinc_lockfile
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas      2563 Mar  8 04:47 pandaJob.out
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas        57 Mar  8 04:47 setup.sh.local
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas    999169 Mar  8 04:47 agis_schedconf.cvmfs.json
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas       429 Mar  8 04:47 workernode_map.json
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas      7170 Mar  8 07:01 init_data.xml
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas 185903591 Mar  8 07:04 HITS.48955010._013009.pool.root.1
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas       532 Mar  8 07:05 boinc_task_state.xml
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas      1033 Mar  8 07:05 memory_monitor_summary.json
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas   1521291 Mar  8 07:06 agis_ddmendpoints.agis.ALL.json
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas        96 Mar  8 07:06 pilot_heartbeat.json
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas    442652 Mar  8 07:06 log.48955010._013009.job.log.tgz.1
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas      6323 Mar  8 07:06 heartbeat.json
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas        28 Mar  8 07:07 wrapper_checkpoint.txt
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 07:07 boinc_mmap_file
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas      4820 Mar  8 07:07 pilotlog.txt
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas   1025929 Mar  8 07:07 log.48955010._013009.job.log.1
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas       357 Mar  8 07:07 output.list
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas       620 Mar  8 07:07 runtime_log
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas   1484800 Mar  8 07:07 result.tar.gz
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas      9418 Mar  8 07:07 runtime_log.err
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas       775 Mar  8 07:07 5WbMDm4PFJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJ2ULDmKJFACo.diag
[2026-03-08 07:07:15] -rw-r--r--. 1 boincer umatlas     22160 Mar  8 07:07 stderr.txt
[2026-03-08 07:07:15] HITS file was successfully produced:
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas 185903591 Mar  8 07:04 shared/HITS.pool.root.1
[2026-03-08 07:07:15]  *** Contents of shared directory: ***
[2026-03-08 07:07:15] total 619140
[2026-03-08 07:07:15] -rw-r--r--. 3 boincer umatlas 445982392 Mar  8 03:05 ATLAS.root_0
[2026-03-08 07:07:15] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 03:05 start_atlas.sh
[2026-03-08 07:07:15] -rw-r--r--. 2 boincer umatlas    597956 Mar  8 03:05 input.tar.gz
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas 185903591 Mar  8 07:04 HITS.pool.root.1
[2026-03-08 07:07:15] -rw-------. 1 boincer umatlas   1484800 Mar  8 07:07 result.tar.gz
07:07:17 (2205780): run_atlas exited; CPU time 21895.931115
07:07:17 (2205780): called boinc_finish(0)

</stderr_txt>
]]>

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