Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:56:30 (440926): wrapper (7.7.26015): starting
11:56:30 (440926): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 11:56:30] Arguments: --nthreads 4
[2026-03-09 11:56:30] Threads: 4
[2026-03-09 11:56:30] Checking for CVMFS
[2026-03-09 11:56:30] No cvmfs_config command found, will try listing directly
[2026-03-09 11:56:30] CVMFS is ok
[2026-03-09 11:56:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 11:56:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 11:56:30] Further information can be found at the LHC@home message board.
[2026-03-09 11:56:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 11:56:30] Checking for apptainer binary...
[2026-03-09 11:56:30] which: no apptainer in ((null))
[2026-03-09 11:56:30] apptainer is not installed, using version from CVMFS
[2026-03-09 11:56:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 11:56:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-09 11:56:30] apptainer works
[2026-03-09 11:56:30] Set ATHENA_PROC_NUMBER=4
[2026-03-09 11:56:30] Set ATHENA_CORE_NUMBER=4
[2026-03-09 11:56:30] Starting ATLAS job with PandaID=7043052533
[2026-03-09 11:56:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 13:46:05]  *** The last 200 lines of the pilot log: ***
[2026-03-09 13:46:05] 2026-03-09 12:45:06,974 | INFO     | log transfer has been attempted: DONE
[2026-03-09 13:46:05] 2026-03-09 12:45:06,974 | INFO     | job 7043052533 has finished - writing final server update
[2026-03-09 13:46:05] 2026-03-09 12:45:06,974 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3469374/.job.ad'
[2026-03-09 13:46:05] 2026-03-09 12:45:06,974 | INFO     | total number of processed events: 400 (read)
[2026-03-09 13:46:05] 2026-03-09 12:45:06,996 | INFO     | using path: /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7043052533/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 13:46:05] 2026-03-09 12:45:06,996 | INFO     | extracted standard info from prmon json
[2026-03-09 13:46:05] 2026-03-09 12:45:06,997 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 13:46:05] 2026-03-09 12:45:06,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 13:46:05] 2026-03-09 12:45:06,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 13:46:05] 2026-03-09 12:45:06,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 13:46:05] 2026-03-09 12:45:06,998 | INFO     | fitting pss+swap vs Time
[2026-03-09 13:46:05] 2026-03-09 12:45:06,998 | INFO     | sum of square deviations: 379832238.0
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | sum of deviations: 5153331422.999999
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | mean x: 1773057066.0
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | mean y: 2278901.9813084113
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | intersect: -24053474609.36225
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | chi2: 1.8240315513907424
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | sum of square deviations: 329031285.5
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | sum of deviations: 10938120145.0
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | mean x: 1773056913.5
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | mean y: 2295554.5098039214
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | intersect: -58940152773.20666
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | chi2: 1.1130317133229615
[2026-03-09 13:46:05] 2026-03-09 12:45:06,999 | INFO     | current chi2=1.1130317133229615 (change=38.97958001470289 %)
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | sum of square deviations: 282974608.0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | sum of deviations: 10318433772.0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | mean x: 1773056761.0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | mean y: 2293500.9793814435
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | intersect: -64650746896.11283
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | chi2: 1.1148915183712564
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | current chi2=1.1148915183712564 (change=-0.16709362599763797 %)
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | right removable region: 96
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | sum of square deviations: 329031285.5
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | sum of deviations: -4910529554.5
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | mean x: 1773057218.5
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | mean y: 2308194.9901960786
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | intersect: 26463773280.3941
[2026-03-09 13:46:05] 2026-03-09 12:45:07,000 | INFO     | chi2: 0.738888923100956
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | current chi2=0.738888923100956 (change=59.49143957857602 %)
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | sum of square deviations: 282974608.0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | sum of deviations: -4908612294.0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | mean x: 1773057371.0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | mean y: 2308179.6082474226
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | intersect: 30758605611.27716
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | chi2: 0.7396327863746226
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | current chi2=0.7396327863746226 (change=-0.10067322034613381 %)
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | left removable region: 20
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | sum of square deviations: 136095575.0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,001 | INFO     | sum of deviations: 602139204.5
[2026-03-09 13:46:05] 2026-03-09 12:45:07,004 | INFO     | mean x: 1773057340.5
[2026-03-09 13:46:05] 2026-03-09 12:45:07,004 | INFO     | mean y: 2328051.25
[2026-03-09 13:46:05] 2026-03-09 12:45:07,004 | INFO     | intersect: -7842360040.494023
[2026-03-09 13:46:05] 2026-03-09 12:45:07,004 | INFO     | chi2: 0.00010180604225283995
[2026-03-09 13:46:05] 2026-03-09 12:45:07,004 | INFO     | current memory leak: 4.42 B/s (using 76 data points, chi2=0.00)
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | could have reported an average CPU frequency of 3567 MHz (7 samples)
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | ..............................
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | . Timing measurements:
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | . get job = 0 s
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | . initial setup = 7 s
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | . payload setup = 7 s
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | . stage-in = 0 s
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | . payload execution = 6472 s
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | . stage-out = 0 s
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | . log creation = 0 s
[2026-03-09 13:46:05] 2026-03-09 12:45:07,005 | INFO     | ..............................
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | 
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | job summary report
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | --------------------------------------------------
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | PanDA job id: 7043052533
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | task id: 48967011
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | errors: (none)
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | pilot state: finished 
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | transexitcode: 0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | exeerrorcode: 0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | exeerrordiag: 
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | exitcode: 0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | exitmsg: OK
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | cpuconsumptiontime: 24819 s
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | nevents: 400
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | neventsw: 0
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | pid: 451554
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | pgrp: 451554
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | corecount: 4
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | event service: False
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | sizes: {0: 2280044, 1: 2280278, 11: 2280278, 6483: 2307387, 6484: 2316407, 6487: 2316785}
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | --------------------------------------------------
[2026-03-09 13:46:05] 2026-03-09 12:45:07,542 | INFO     | 
[2026-03-09 13:46:05] 2026-03-09 12:45:07,543 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/2
[2026-03-09 13:46:05] 2026-03-09 12:45:07,557 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,557 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,557 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,557 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | job 7043052533 has completed (purged errors)
[2026-03-09 13:46:05] 2026-03-09 12:45:07,558 | INFO     | overall cleanup function is called
[2026-03-09 13:46:05] 2026-03-09 12:45:08,565 | INFO     | --- collectZombieJob: --- 10, [451554]
[2026-03-09 13:46:05] 2026-03-09 12:45:08,565 | INFO     | zombie collector waiting for pid 451554
[2026-03-09 13:46:05] 2026-03-09 12:45:08,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 13:46:05] 2026-03-09 12:45:08,565 | INFO     | collected zombie processes
[2026-03-09 13:46:05] 2026-03-09 12:45:08,565 | INFO     | will attempt to kill all subprocesses of pid=451554
[2026-03-09 13:46:05] 2026-03-09 12:45:09,008 | INFO     | process IDs to be killed: [451554] (in reverse order)
[2026-03-09 13:46:05] 2026-03-09 12:45:09,277 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 13:46:05] 2026-03-09 12:45:09,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 13:46:05] 2026-03-09 12:45:09,310 | INFO     | did not find any defunct processes belonging to 451554
[2026-03-09 13:46:05] 2026-03-09 12:45:09,337 | INFO     | did not find any defunct processes belonging to 451554
[2026-03-09 13:46:05] 2026-03-09 12:45:09,338 | INFO     | ready for new job
[2026-03-09 13:46:05] 2026-03-09 12:45:09,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 13:46:05] 2026-03-09 12:45:09,339 | INFO     | **************************************
[2026-03-09 13:46:05] 2026-03-09 12:45:09,342 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 13:46:05] 2026-03-09 12:45:09,342 | INFO     | **************************************
[2026-03-09 13:46:05] 2026-03-09 12:45:09,342 | INFO     | 
[2026-03-09 13:46:05] 2026-03-09 12:45:09,348 | INFO     | architecture information:
[2026-03-09 13:46:05] 2026-03-09 12:45:09,350 | INFO     | executing command: cat /etc/os-release
[2026-03-09 13:46:05] 2026-03-09 12:45:09,370 | INFO     | cat /etc/os-release:
[2026-03-09 13:46:05] NAME="CentOS Linux"
[2026-03-09 13:46:05] VERSION="7 (Core)"
[2026-03-09 13:46:05] ID="centos"
[2026-03-09 13:46:05] ID_LIKE="rhel fedora"
[2026-03-09 13:46:05] VERSION_ID="7"
[2026-03-09 13:46:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 13:46:05] ANSI_COLOR="0;31"
[2026-03-09 13:46:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 13:46:05] HOME_URL="https://www.centos.org/"
[2026-03-09 13:46:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 13:46:05] 
[2026-03-09 13:46:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 13:46:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 13:46:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 13:46:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 13:46:05] 
[2026-03-09 13:46:05] 2026-03-09 12:45:09,371 | INFO     | **************************************
[2026-03-09 13:46:05] 2026-03-09 12:45:09,873 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/2
[2026-03-09 13:46:05] 2026-03-09 12:45:09,887 | INFO     | sufficient remaining disk space (19943915520 B)
[2026-03-09 13:46:05] 2026-03-09 12:45:09,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 13:46:05] 2026-03-09 12:45:09,888 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 13:46:05] 2026-03-09 12:45:09,888 | INFO     | update_server=False
[2026-03-09 13:46:05] 2026-03-09 12:45:09,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 13:46:05] 2026-03-09 12:45:10,066 | INFO     | all payload control threads have been joined
[2026-03-09 13:46:05] 2026-03-09 12:45:10,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 13:46:05] 2026-03-09 12:45:10,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:46:05] 2026-03-09 12:45:10,312 | INFO     | aborting loop
[2026-03-09 13:46:05] 2026-03-09 12:45:10,796 | INFO     | all data control threads have been joined
[2026-03-09 13:46:05] 2026-03-09 12:45:10,893 | INFO     | [job] retrieve thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:11,071 | INFO     | [payload] control thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:11,194 | INFO     | all job control threads have been joined
[2026-03-09 13:46:05] 2026-03-09 12:45:11,290 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:11,317 | INFO     | [job] job monitor thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:11,437 | INFO     | [job] validate thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:11,730 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:11,801 | INFO     | [data] control thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:11,805 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:11,916 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:11,993 | INFO     | [payload] failed_post thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:12,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:46:05] 2026-03-09 12:45:12,067 | INFO     | [data] copytool_in thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:12,199 | INFO     | [job] control thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:12,234 | INFO     | [data] copytool_out thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:12,470 | INFO     | [payload] validate_post thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:12,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 13:46:05] 2026-03-09 12:45:13,066 | INFO     | [job] queue monitor thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:16,988 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 13:46:05] 2026-03-09 12:45:39,479 | INFO     | PID=445573 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 13:46:05] 2026-03-09 12:45:39,480 | INFO     | .. there are 53 such processes running
[2026-03-09 13:46:05] 2026-03-09 12:45:39,480 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 13:46:05] 2026-03-09 12:45:39,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 13:46:05] 2026-03-09 12:45:39,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 13:46:05] 2026-03-09 12:45:59,729 | INFO     | [monitor] cgroup control has ended
[2026-03-09 13:46:05] 2026-03-09 12:46:00,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23451255932736)>', '<ExcThread(monitor, started 23451017688832)>']
[2026-03-09 13:46:05] 2026-03-09 12:46:00,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 13:46:05] 2026-03-09 12:46:00,585 | INFO     | [monitor] control thread has ended
[2026-03-09 13:46:05] 2026-03-09 12:46:05,402 | INFO     | all workflow threads have been joined
[2026-03-09 13:46:05] 2026-03-09 12:46:05,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 13:46:05] 2026-03-09 12:46:05,402 | INFO     | traces error code: 0
[2026-03-09 13:46:05] 2026-03-09 12:46:05,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 13:46:05] 2026-03-09 12:46:05,533 [wrapper] ==== pilot stdout END ====
[2026-03-09 13:46:05] 2026-03-09 12:46:05,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 13:46:05] 2026-03-09 12:46:05,541 [wrapper] pilotpid: 445573
[2026-03-09 13:46:05] 2026-03-09 12:46:05,542 [wrapper] Pilot exit status: 0
[2026-03-09 13:46:05] 2026-03-09 12:46:05,552 [wrapper] pandaids: 7043052533
[2026-03-09 13:46:05] 2026-03-09 12:46:05,677 [wrapper] cleanup supervisor_pilot 1494174 445574
[2026-03-09 13:46:05] 2026-03-09 12:46:05,680 [wrapper] Test setup, not cleaning
[2026-03-09 13:46:05] 2026-03-09 12:46:05,682 [wrapper] apfmon messages muted
[2026-03-09 13:46:05] 2026-03-09 12:46:05,687 [wrapper] ==== wrapper stdout END ====
[2026-03-09 13:46:05] 2026-03-09 12:46:05,690 [wrapper] ==== wrapper stderr END ====
[2026-03-09 13:46:05]  *** Error codes and diagnostics ***
[2026-03-09 13:46:05]     "exeErrorCode": 0,
[2026-03-09 13:46:05]     "exeErrorDiag": "",
[2026-03-09 13:46:05]     "pilotErrorCode": 0,
[2026-03-09 13:46:05]     "pilotErrorDiag": "",
[2026-03-09 13:46:05]  *** Listing of results directory ***
[2026-03-09 13:46:05] total 424060
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc    584627 Mar  6 11:24 pilot3.tar.gz
[2026-03-09 13:46:05] -rwx------. 1 boinc boinc     36322 Mar  6 11:24 runpilot2-wrapper.sh
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc      5111 Mar  6 11:25 queuedata.json
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc       100 Mar  9 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 13:46:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 11:56 run_atlas
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc       105 Mar  9 11:56 job.xml
[2026-03-09 13:46:05] -rw-r--r--. 2 boinc boinc     15845 Mar  9 11:56 start_atlas.sh
[2026-03-09 13:46:05] drwxrwx--x. 2 boinc boinc      4096 Mar  9 11:56 shared
[2026-03-09 13:46:05] -rw-r--r--. 2 boinc boinc    597950 Mar  9 11:56 input.tar.gz
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc      6707 Mar  9 11:56 init_data.xml
[2026-03-09 13:46:05] -rw-r--r--. 2 boinc boinc 217715977 Mar  9 11:56 EVNT.48967008._000046.pool.root.1
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc         0 Mar  9 11:56 boinc_lockfile
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc      2563 Mar  9 11:56 pandaJob.out
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc    990726 Mar  9 11:56 agis_schedconf.cvmfs.json
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc   1511578 Mar  9 11:56 agis_ddmendpoints.agis.ALL.json
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc       444 Mar  9 11:56 workernode_map.json
[2026-03-09 13:46:05] drwx------. 5 boinc boinc      4096 Mar  9 11:56 pilot3
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc 210144759 Mar  9 13:44 HITS.48967011._001140.pool.root.1
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc        95 Mar  9 13:44 pilot_heartbeat.json
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc       529 Mar  9 13:44 boinc_task_state.xml
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc      1031 Mar  9 13:45 memory_monitor_summary.json
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc    294431 Mar  9 13:45 log.48967011._001140.job.log.tgz.1
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc      6353 Mar  9 13:45 heartbeat.json
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc      8192 Mar  9 13:45 boinc_mmap_file
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc        27 Mar  9 13:45 wrapper_checkpoint.txt
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc      4828 Mar  9 13:46 pilotlog.txt
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc    933242 Mar  9 13:46 log.48967011._001140.job.log.1
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc       357 Mar  9 13:46 output.list
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc       620 Mar  9 13:46 runtime_log
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc   1249280 Mar  9 13:46 result.tar.gz
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc      9204 Mar  9 13:46 runtime_log.err
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc       663 Mar  9 13:46 XZAODmTXhI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJTRLDmFK66rn.diag
[2026-03-09 13:46:05] -rw-r--r--. 1 boinc boinc     20836 Mar  9 13:46 stderr.txt
[2026-03-09 13:46:05] HITS file was successfully produced:
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc 210144759 Mar  9 13:44 shared/HITS.pool.root.1
[2026-03-09 13:46:05]  *** Contents of shared directory: ***
[2026-03-09 13:46:05] total 419664
[2026-03-09 13:46:05] -rw-r--r--. 2 boinc boinc     15845 Mar  9 11:56 start_atlas.sh
[2026-03-09 13:46:05] -rw-r--r--. 2 boinc boinc    597950 Mar  9 11:56 input.tar.gz
[2026-03-09 13:46:05] -rw-r--r--. 2 boinc boinc 217715977 Mar  9 11:56 ATLAS.root_0
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc 210144759 Mar  9 13:44 HITS.pool.root.1
[2026-03-09 13:46:05] -rw-------. 1 boinc boinc   1249280 Mar  9 13:46 result.tar.gz
13:46:07 (440926): run_atlas exited; CPU time 25087.930134
13:46:07 (440926): called boinc_finish(0)

</stderr_txt>
]]>

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