Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:10:54 (4158978): wrapper (7.7.26015): starting
12:10:54 (4158978): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 12:10:54] Arguments: --nthreads 4
[2026-03-09 12:10:54] Threads: 4
[2026-03-09 12:10:54] Checking for CVMFS
[2026-03-09 12:10:54] No cvmfs_config command found, will try listing directly
[2026-03-09 12:10:54] CVMFS is ok
[2026-03-09 12:10:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 12:10:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 12:10:54] Further information can be found at the LHC@home message board.
[2026-03-09 12:10:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 12:10:54] Checking for apptainer binary...
[2026-03-09 12:10:54] which: no apptainer in ((null))
[2026-03-09 12:10:54] apptainer is not installed, using version from CVMFS
[2026-03-09 12:10:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 12:10:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-09 12:10:54] apptainer works
[2026-03-09 12:10:54] Set ATHENA_PROC_NUMBER=4
[2026-03-09 12:10:54] Set ATHENA_CORE_NUMBER=4
[2026-03-09 12:10:54] Starting ATLAS job with PandaID=7045940621
[2026-03-09 12:10:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 14:13:28]  *** The last 200 lines of the pilot log: ***
[2026-03-09 14:13:28] 2026-03-09 13:12:33,789 | INFO     | mean y: 2370481.232323232
[2026-03-09 14:13:28] 2026-03-09 13:12:33,789 | INFO     | intersect: -4312240379.526114
[2026-03-09 14:13:28] 2026-03-09 13:12:33,789 | INFO     | chi2: 0.00039836504405545565
[2026-03-09 14:13:28] 2026-03-09 13:12:33,789 | INFO     | current chi2=0.00039836504405545565 (change=38.50926143351819 %)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,789 | INFO     | sum of square deviations: 257521107.5
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | sum of deviations: 446388758.5
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | mean x: 1773059054.5
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | mean y: 2371485.1170212766
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | intersect: -3071060583.302609
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | chi2: 0.0002393220670902776
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | current chi2=0.0002393220670902776 (change=39.923928903520455 %)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | sum of square deviations: 218571540.0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | sum of deviations: 229776874.0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | mean x: 1773059207.0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | mean y: 2372328.3483146066
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | intersect: -1861584900.4902565
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | chi2: 0.00010849499743938961
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | current chi2=0.00010849499743938961 (change=54.665694326272515 %)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | sum of square deviations: 183761585.0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,790 | INFO     | sum of deviations: 81251207.00000001
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | mean x: 1773059359.5
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | mean y: 2372979.4285714286
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | intersect: -781595079.1948996
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | chi2: 3.2205627933000506e-05
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | current chi2=3.2205627933000506e-05 (change=70.31602498447721 %)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | sum of square deviations: 152858680.0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | sum of deviations: 16662393.99999999
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | mean x: 1773059512.0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | mean y: 2373293.6835443038
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | intersect: -190899448.00434488
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | chi2: 5.694033314020407e-06
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | current chi2=5.694033314020407e-06 (change=82.31975688887023 %)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | left removable region not found
[2026-03-09 14:13:28] 2026-03-09 13:12:33,791 | INFO     | sum of square deviations: 447383272.0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | sum of deviations: 14157517632.999998
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | mean x: 1773058109.0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | mean y: 2334149.5575221237
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | intersect: -56106382947.27021
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | chi2: 1.119933011566534
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | current memory leak: 31.65 B/s (using 113 data points, chi2=1.12)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | could have reported an average CPU frequency of 3584 MHz (8 samples)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | ..............................
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | . Timing measurements:
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | . get job = 0 s
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | . initial setup = 6 s
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | . payload setup = 5 s
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | . stage-in = 0 s
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | . payload execution = 7260 s
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | . stage-out = 0 s
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | . log creation = 0 s
[2026-03-09 14:13:28] 2026-03-09 13:12:33,792 | INFO     | ..............................
[2026-03-09 14:13:28] 2026-03-09 13:12:33,839 | INFO     | 
[2026-03-09 14:13:28] 2026-03-09 13:12:33,839 | INFO     | job summary report
[2026-03-09 14:13:28] 2026-03-09 13:12:33,839 | INFO     | --------------------------------------------------
[2026-03-09 14:13:28] 2026-03-09 13:12:33,839 | INFO     | PanDA job id: 7045940621
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | task id: 48997968
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | errors: (none)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | pilot state: finished 
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | transexitcode: 0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | exeerrorcode: 0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | exeerrordiag: 
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | exitcode: 0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | exitmsg: OK
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | cpuconsumptiontime: 27980 s
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | nevents: 400
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | neventsw: 0
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | pid: 4169419
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | pgrp: 4169419
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | corecount: 4
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | event service: False
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | sizes: {0: 2279984, 1: 2280246, 11: 2280274, 7270: 2316644, 7272: 2316644, 7273: 2316838}
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | --------------------------------------------------
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | 
[2026-03-09 14:13:28] 2026-03-09 13:12:33,840 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/1
[2026-03-09 14:13:28] 2026-03-09 13:12:33,864 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 14:13:28] 2026-03-09 13:12:33,867 | INFO     | job 7045940621 has completed (purged errors)
[2026-03-09 14:13:28] 2026-03-09 13:12:33,868 | INFO     | overall cleanup function is called
[2026-03-09 14:13:28] 2026-03-09 13:12:34,180 | WARNING  | process 4169419 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 14:13:28] 2026-03-09 13:12:34,456 | INFO     | using path: /var/lib/boinc/var/slot80/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 14:13:28] 2026-03-09 13:12:34,457 | INFO     | using path: /var/lib/boinc/var/slot80/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 14:13:28] 2026-03-09 13:12:34,457 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-09 14:13:28] 2026-03-09 13:12:34,457 | WARNING  | maxPSS not found in memory monitor output
[2026-03-09 14:13:28] 2026-03-09 13:12:34,457 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7045940621/payload.stdout) since it has not been created yet
[2026-03-09 14:13:28] 2026-03-09 13:12:34,457 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/1
[2026-03-09 14:13:28] 2026-03-09 13:12:34,472 | INFO     | sufficient remaining disk space (21113077760 B)
[2026-03-09 14:13:28] 2026-03-09 13:12:34,472 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-09 14:13:28] 2026-03-09 13:12:34,472 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7045940621/HITS.48997968._000337.pool.root.1 since it does not exist
[2026-03-09 14:13:28] 2026-03-09 13:12:34,874 | INFO     | --- collectZombieJob: --- 10, [4169419]
[2026-03-09 14:13:28] 2026-03-09 13:12:34,876 | INFO     | zombie collector waiting for pid 4169419
[2026-03-09 14:13:28] 2026-03-09 13:12:34,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 14:13:28] 2026-03-09 13:12:34,876 | INFO     | collected zombie processes
[2026-03-09 14:13:28] 2026-03-09 13:12:34,876 | INFO     | will attempt to kill all subprocesses of pid=4169419
[2026-03-09 14:13:28] 2026-03-09 13:12:34,983 | INFO     | number of running child processes to parent process 4169419: 1
[2026-03-09 14:13:28] 2026-03-09 13:12:34,983 | INFO     | maximum number of monitored processes: 6
[2026-03-09 14:13:28] 2026-03-09 13:12:34,983 | INFO     | aborting job monitoring since job object (job id=7045940621) has expired
[2026-03-09 14:13:28] 2026-03-09 13:12:35,366 | INFO     | process IDs to be killed: [4169419] (in reverse order)
[2026-03-09 14:13:28] 2026-03-09 13:12:35,572 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 14:13:28] 2026-03-09 13:12:35,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 14:13:28] 2026-03-09 13:12:35,599 | INFO     | did not find any defunct processes belonging to 4169419
[2026-03-09 14:13:28] 2026-03-09 13:12:35,624 | INFO     | did not find any defunct processes belonging to 4169419
[2026-03-09 14:13:28] 2026-03-09 13:12:35,624 | INFO     | ready for new job
[2026-03-09 14:13:28] 2026-03-09 13:12:35,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 14:13:28] 2026-03-09 13:12:35,625 | INFO     | **************************************
[2026-03-09 14:13:28] 2026-03-09 13:12:35,626 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 14:13:28] 2026-03-09 13:12:35,626 | INFO     | **************************************
[2026-03-09 14:13:28] 2026-03-09 13:12:35,626 | INFO     | 
[2026-03-09 14:13:28] 2026-03-09 13:12:35,632 | INFO     | architecture information:
[2026-03-09 14:13:28] 2026-03-09 13:12:35,632 | INFO     | executing command: cat /etc/os-release
[2026-03-09 14:13:28] 2026-03-09 13:12:35,645 | INFO     | cat /etc/os-release:
[2026-03-09 14:13:28] NAME="CentOS Linux"
[2026-03-09 14:13:28] VERSION="7 (Core)"
[2026-03-09 14:13:28] ID="centos"
[2026-03-09 14:13:28] ID_LIKE="rhel fedora"
[2026-03-09 14:13:28] VERSION_ID="7"
[2026-03-09 14:13:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 14:13:28] ANSI_COLOR="0;31"
[2026-03-09 14:13:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 14:13:28] HOME_URL="https://www.centos.org/"
[2026-03-09 14:13:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 14:13:28] 
[2026-03-09 14:13:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 14:13:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 14:13:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 14:13:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 14:13:28] 
[2026-03-09 14:13:28] 2026-03-09 13:12:35,645 | INFO     | **************************************
[2026-03-09 14:13:28] 2026-03-09 13:12:36,148 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/1
[2026-03-09 14:13:28] 2026-03-09 13:12:36,166 | INFO     | sufficient remaining disk space (21110980608 B)
[2026-03-09 14:13:28] 2026-03-09 13:12:36,166 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 14:13:28] 2026-03-09 13:12:36,166 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 14:13:28] 2026-03-09 13:12:36,166 | INFO     | update_server=False
[2026-03-09 14:13:28] 2026-03-09 13:12:36,166 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 14:13:28] 2026-03-09 13:12:36,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:13:28] 2026-03-09 13:12:36,166 | INFO     | aborting loop
[2026-03-09 14:13:28] 2026-03-09 13:12:36,225 | INFO     | all payload control threads have been joined
[2026-03-09 14:13:28] 2026-03-09 13:12:36,869 | INFO     | all data control threads have been joined
[2026-03-09 14:13:28] 2026-03-09 13:12:37,171 | INFO     | [job] retrieve thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:37,171 | INFO     | [job] job monitor thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:37,227 | INFO     | [payload] control thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:37,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 14:13:28] 2026-03-09 13:12:37,523 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:37,613 | INFO     | all job control threads have been joined
[2026-03-09 14:13:28] 2026-03-09 13:12:37,628 | INFO     | [job] validate thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:37,874 | INFO     | [data] control thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:38,018 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:38,051 | INFO     | [data] copytool_in thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:38,160 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:38,570 | INFO     | [payload] validate_post thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:38,619 | INFO     | [job] control thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:38,715 | INFO     | [payload] failed_post thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:38,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:13:28] 2026-03-09 13:12:39,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 14:13:28] 2026-03-09 13:12:39,270 | INFO     | [data] copytool_out thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:39,855 | INFO     | [job] queue monitor thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:43,048 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:12:46,418 | INFO     | job.realtimelogging is not enabled
[2026-03-09 14:13:28] 2026-03-09 13:12:47,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 14:13:28] 2026-03-09 13:13:07,089 | INFO     | PID=4163609 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 14:13:28] 2026-03-09 13:13:07,090 | INFO     | .. there are 54 such processes running
[2026-03-09 14:13:28] 2026-03-09 13:13:07,090 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 14:13:28] 2026-03-09 13:13:07,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 14:13:28] 2026-03-09 13:13:07,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 14:13:28] 2026-03-09 13:13:21,909 | INFO     | [monitor] cgroup control has ended
[2026-03-09 14:13:28] 2026-03-09 13:13:23,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22801129740096)>', '<ExcThread(monitor, started 22800885876480)>']
[2026-03-09 14:13:28] 2026-03-09 13:13:24,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 14:13:28] 2026-03-09 13:13:24,169 | INFO     | [monitor] control thread has ended
[2026-03-09 14:13:28] 2026-03-09 13:13:28,457 | INFO     | all workflow threads have been joined
[2026-03-09 14:13:28] 2026-03-09 13:13:28,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 14:13:28] 2026-03-09 13:13:28,457 | INFO     | traces error code: 0
[2026-03-09 14:13:28] 2026-03-09 13:13:28,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 14:13:28] 2026-03-09 13:13:28,581 [wrapper] ==== pilot stdout END ====
[2026-03-09 14:13:28] 2026-03-09 13:13:28,585 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 14:13:28] 2026-03-09 13:13:28,587 [wrapper] pilotpid: 4163609
[2026-03-09 14:13:28] 2026-03-09 13:13:28,589 [wrapper] Pilot exit status: 0
[2026-03-09 14:13:28] 2026-03-09 13:13:28,597 [wrapper] pandaids: 7045940621
[2026-03-09 14:13:28] 2026-03-09 13:13:28,715 [wrapper] cleanup supervisor_pilot 1170211 4163610
[2026-03-09 14:13:28] 2026-03-09 13:13:28,717 [wrapper] Test setup, not cleaning
[2026-03-09 14:13:28] 2026-03-09 13:13:28,720 [wrapper] apfmon messages muted
[2026-03-09 14:13:28] 2026-03-09 13:13:28,722 [wrapper] ==== wrapper stdout END ====
[2026-03-09 14:13:28] 2026-03-09 13:13:28,723 [wrapper] ==== wrapper stderr END ====
[2026-03-09 14:13:28]  *** Error codes and diagnostics ***
[2026-03-09 14:13:28]     "exeErrorCode": 0,
[2026-03-09 14:13:28]     "exeErrorDiag": "",
[2026-03-09 14:13:28]     "pilotErrorCode": 0,
[2026-03-09 14:13:28]     "pilotErrorDiag": "",
[2026-03-09 14:13:28]  *** Listing of results directory ***
[2026-03-09 14:13:28] total 641708
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc    584627 Mar  8 06:46 pilot3.tar.gz
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc      5111 Mar  8 06:48 queuedata.json
[2026-03-09 14:13:28] -rwx------. 1 boinc boinc     36322 Mar  8 06:49 runpilot2-wrapper.sh
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc       100 Mar  9 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 14:13:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 12:10 run_atlas
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc       105 Mar  9 12:10 job.xml
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc      6707 Mar  9 12:10 init_data.xml
[2026-03-09 14:13:28] -rw-r--r--. 2 boinc boinc 361028331 Mar  9 12:10 EVNT.48997965._000014.pool.root.1
[2026-03-09 14:13:28] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:10 start_atlas.sh
[2026-03-09 14:13:28] drwxrwx--x. 2 boinc boinc      4096 Mar  9 12:10 shared
[2026-03-09 14:13:28] -rw-r--r--. 2 boinc boinc    597952 Mar  9 12:10 input.tar.gz
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc         0 Mar  9 12:10 boinc_lockfile
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc      2565 Mar  9 12:10 pandaJob.out
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc    990726 Mar  9 12:11 agis_schedconf.cvmfs.json
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc   1511578 Mar  9 12:11 agis_ddmendpoints.agis.ALL.json
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc       443 Mar  9 12:11 workernode_map.json
[2026-03-09 14:13:28] drwx------. 5 boinc boinc      4096 Mar  9 12:11 pilot3
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc 289446550 Mar  9 14:11 HITS.48997968._000337.pool.root.1
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc       530 Mar  9 14:12 boinc_task_state.xml
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc      1031 Mar  9 14:12 memory_monitor_summary.json
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc    305050 Mar  9 14:12 log.48997968._000337.job.log.tgz.1
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc      6347 Mar  9 14:12 heartbeat.json
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc        95 Mar  9 14:13 pilot_heartbeat.json
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc      8192 Mar  9 14:13 boinc_mmap_file
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc        27 Mar  9 14:13 wrapper_checkpoint.txt
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc      4901 Mar  9 14:13 pilotlog.txt
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc   1053157 Mar  9 14:13 log.48997968._000337.job.log.1
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc       357 Mar  9 14:13 output.list
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc       620 Mar  9 14:13 runtime_log
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc   1372160 Mar  9 14:13 result.tar.gz
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc      9204 Mar  9 14:13 runtime_log.err
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc       662 Mar  9 14:13 8bPKDm1BMJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0RYLDmcAoaVo.diag
[2026-03-09 14:13:28] -rw-r--r--. 1 boinc boinc     21325 Mar  9 14:13 stderr.txt
[2026-03-09 14:13:28] HITS file was successfully produced:
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc 289446550 Mar  9 14:11 shared/HITS.pool.root.1
[2026-03-09 14:13:28]  *** Contents of shared directory: ***
[2026-03-09 14:13:28] total 637180
[2026-03-09 14:13:28] -rw-r--r--. 2 boinc boinc 361028331 Mar  9 12:10 ATLAS.root_0
[2026-03-09 14:13:28] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:10 start_atlas.sh
[2026-03-09 14:13:28] -rw-r--r--. 2 boinc boinc    597952 Mar  9 12:10 input.tar.gz
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc 289446550 Mar  9 14:11 HITS.pool.root.1
[2026-03-09 14:13:28] -rw-------. 1 boinc boinc   1372160 Mar  9 14:13 result.tar.gz
14:13:29 (4158978): run_atlas exited; CPU time 28308.806394
14:13:29 (4158978): called boinc_finish(0)

</stderr_txt>
]]>

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