Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:00:54 (2336351): wrapper (7.7.26015): starting
09:00:54 (2336351): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 09:00:54] Arguments: --nthreads 4
[2026-03-10 09:00:54] Threads: 4
[2026-03-10 09:00:54] Checking for CVMFS
[2026-03-10 09:00:54] No cvmfs_config command found, will try listing directly
[2026-03-10 09:00:54] CVMFS is ok
[2026-03-10 09:00:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 09:00:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 09:00:54] Further information can be found at the LHC@home message board.
[2026-03-10 09:00:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 09:00:54] Checking for apptainer binary...
[2026-03-10 09:00:54] which: no apptainer in ((null))
[2026-03-10 09:00:54] apptainer is not installed, using version from CVMFS
[2026-03-10 09:00:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 09:00:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-10 09:00:54] apptainer works
[2026-03-10 09:00:54] Set ATHENA_PROC_NUMBER=4
[2026-03-10 09:00:54] Set ATHENA_CORE_NUMBER=4
[2026-03-10 09:00:55] Starting ATLAS job with PandaID=7045938453
[2026-03-10 09:00:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 12:58:41]  *** The last 200 lines of the pilot log: ***
[2026-03-10 12:58:41] 2026-03-10 11:57:36,884 | INFO     | extracted standard info from prmon json
[2026-03-10 12:58:41] 2026-03-10 11:57:36,884 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 12:58:41] 2026-03-10 11:57:36,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 12:58:41] 2026-03-10 11:57:36,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 12:58:41] 2026-03-10 11:57:36,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 12:58:41] 2026-03-10 11:57:36,889 | INFO     | fitting pss+swap vs Time
[2026-03-10 12:58:41] 2026-03-10 11:57:36,889 | INFO     | sum of square deviations: 3922276332.0
[2026-03-10 12:58:41] 2026-03-10 11:57:36,891 | INFO     | sum of deviations: 21289259371.999996
[2026-03-10 12:58:41] 2026-03-10 11:57:36,891 | INFO     | mean x: 1773136770.0
[2026-03-10 12:58:41] 2026-03-10 11:57:36,891 | INFO     | mean y: 2305668.206008584
[2026-03-10 12:58:41] 2026-03-10 11:57:36,891 | INFO     | intersect: -9621893496.596819
[2026-03-10 12:58:41] 2026-03-10 11:57:36,892 | INFO     | chi2: 2.1157639656455984
[2026-03-10 12:58:41] 2026-03-10 11:57:36,892 | INFO     | sum of square deviations: 3675146117.0
[2026-03-10 12:58:41] 2026-03-10 11:57:36,894 | INFO     | sum of deviations: 34892610426.99999
[2026-03-10 12:58:41] 2026-03-10 11:57:36,894 | INFO     | mean x: 1773136617.5
[2026-03-10 12:58:41] 2026-03-10 11:57:36,894 | INFO     | mean y: 2313909.0263157897
[2026-03-10 12:58:41] 2026-03-10 11:57:36,894 | INFO     | intersect: -16832218177.218895
[2026-03-10 12:58:41] 2026-03-10 11:57:36,894 | INFO     | chi2: 1.350002305603187
[2026-03-10 12:58:41] 2026-03-10 11:57:36,894 | INFO     | current chi2=1.350002305603187 (change=36.19315162165309 %)
[2026-03-10 12:58:41] 2026-03-10 11:57:36,895 | INFO     | sum of square deviations: 3438620752.0
[2026-03-10 12:58:41] 2026-03-10 11:57:36,896 | INFO     | sum of deviations: 33943027575.0
[2026-03-10 12:58:41] 2026-03-10 11:57:36,897 | INFO     | mean x: 1773136465.0
[2026-03-10 12:58:41] 2026-03-10 11:57:36,897 | INFO     | mean y: 2313296.6816143496
[2026-03-10 12:58:41] 2026-03-10 11:57:36,897 | INFO     | intersect: -17500524110.06856
[2026-03-10 12:58:41] 2026-03-10 11:57:36,897 | INFO     | chi2: 1.350493930323478
[2026-03-10 12:58:41] 2026-03-10 11:57:36,897 | INFO     | current chi2=1.350493930323478 (change=-0.03641658375327091 %)
[2026-03-10 12:58:41] 2026-03-10 11:57:36,897 | INFO     | right removable region: 222
[2026-03-10 12:58:41] 2026-03-10 11:57:36,898 | INFO     | sum of square deviations: 3675146117.0
[2026-03-10 12:58:41] 2026-03-10 11:57:36,899 | INFO     | sum of deviations: -9775349521.5
[2026-03-10 12:58:41] 2026-03-10 11:57:36,899 | INFO     | mean x: 1773136922.5
[2026-03-10 12:58:41] 2026-03-10 11:57:36,899 | INFO     | mean y: 2324641.057017544
[2026-03-10 12:58:41] 2026-03-10 11:57:36,899 | INFO     | intersect: 4718608732.92959
[2026-03-10 12:58:41] 2026-03-10 11:57:36,900 | INFO     | chi2: 0.7847534617189426
[2026-03-10 12:58:41] 2026-03-10 11:57:36,900 | INFO     | current chi2=0.7847534617189426 (change=62.90921508914701 %)
[2026-03-10 12:58:41] 2026-03-10 11:57:36,900 | INFO     | sum of square deviations: 3438620752.0
[2026-03-10 12:58:41] 2026-03-10 11:57:36,902 | INFO     | sum of deviations: -8699083730.000002
[2026-03-10 12:58:41] 2026-03-10 11:57:36,902 | INFO     | mean x: 1773137075.0
[2026-03-10 12:58:41] 2026-03-10 11:57:36,902 | INFO     | mean y: 2323943.802690583
[2026-03-10 12:58:41] 2026-03-10 11:57:36,902 | INFO     | intersect: 4488037546.043027
[2026-03-10 12:58:41] 2026-03-10 11:57:36,902 | INFO     | chi2: 0.7840650271386611
[2026-03-10 12:58:41] 2026-03-10 11:57:36,903 | INFO     | current chi2=0.7840650271386611 (change=0.08772622407723901 %)
[2026-03-10 12:58:41] 2026-03-10 11:57:36,903 | INFO     | left removable region: 20
[2026-03-10 12:58:41] 2026-03-10 11:57:36,903 | INFO     | sum of square deviations: 2555770710.5
[2026-03-10 12:58:41] 2026-03-10 11:57:36,904 | INFO     | sum of deviations: 4209520177.5
[2026-03-10 12:58:41] 2026-03-10 11:57:36,904 | INFO     | mean x: 1773137044.5
[2026-03-10 12:58:41] 2026-03-10 11:57:36,904 | INFO     | mean y: 2333082.50990099
[2026-03-10 12:58:41] 2026-03-10 11:57:36,904 | INFO     | intersect: -2918138670.151835
[2026-03-10 12:58:41] 2026-03-10 11:57:36,905 | INFO     | chi2: 0.0002849236645303215
[2026-03-10 12:58:41] 2026-03-10 11:57:36,905 | INFO     | current memory leak: 1.65 B/s (using 202 data points, chi2=0.00)
[2026-03-10 12:58:41] 2026-03-10 11:57:36,905 | INFO     | could have reported an average CPU frequency of 2542 MHz (11 samples)
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | ..............................
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | . Timing measurements:
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | . get job = 0 s
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | . initial setup = 6 s
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | . payload setup = 6 s
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | . stage-in = 0 s
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | . payload execution = 14160 s
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | . stage-out = 1 s
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | . log creation = 0 s
[2026-03-10 12:58:41] 2026-03-10 11:57:36,906 | INFO     | ..............................
[2026-03-10 12:58:41] 2026-03-10 11:57:37,028 | INFO     | 
[2026-03-10 12:58:41] 2026-03-10 11:57:37,028 | INFO     | job summary report
[2026-03-10 12:58:41] 2026-03-10 11:57:37,028 | INFO     | --------------------------------------------------
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | PanDA job id: 7045938453
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | task id: 48966988
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | errors: (none)
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | pilot state: finished 
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | transexitcode: 0
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | exeerrorcode: 0
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | exeerrordiag: 
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | exitcode: 0
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | exitmsg: OK
[2026-03-10 12:58:41] 2026-03-10 11:57:37,029 | INFO     | cpuconsumptiontime: 53710 s
[2026-03-10 12:58:41] 2026-03-10 11:57:37,030 | INFO     | nevents: 400
[2026-03-10 12:58:41] 2026-03-10 11:57:37,030 | INFO     | neventsw: 0
[2026-03-10 12:58:41] 2026-03-10 11:57:37,030 | INFO     | pid: 2345305
[2026-03-10 12:58:41] 2026-03-10 11:57:37,030 | INFO     | pgrp: 2345305
[2026-03-10 12:58:41] 2026-03-10 11:57:37,030 | INFO     | corecount: 4
[2026-03-10 12:58:41] 2026-03-10 11:57:37,030 | INFO     | event service: False
[2026-03-10 12:58:41] 2026-03-10 11:57:37,030 | INFO     | sizes: {0: 2280020, 1: 2280226, 11: 2280254, 14170: 2310671, 14171: 2310670, 14172: 2319746, 14173: 2319930, 14174: 2320376}
[2026-03-10 12:58:41] 2026-03-10 11:57:37,030 | INFO     | --------------------------------------------------
[2026-03-10 12:58:41] 2026-03-10 11:57:37,030 | INFO     | 
[2026-03-10 12:58:41] 2026-03-10 11:57:37,031 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/0
[2026-03-10 12:58:41] 2026-03-10 11:57:37,056 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,056 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,056 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,057 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,059 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 12:58:41] 2026-03-10 11:57:37,059 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,059 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 12:58:41] 2026-03-10 11:57:37,059 | INFO     | job 7045938453 has completed (purged errors)
[2026-03-10 12:58:41] 2026-03-10 11:57:37,059 | INFO     | overall cleanup function is called
[2026-03-10 12:58:41] 2026-03-10 11:57:37,126 | INFO     | number of running child processes to parent process 2345305: 1
[2026-03-10 12:58:41] 2026-03-10 11:57:37,126 | INFO     | maximum number of monitored processes: 6
[2026-03-10 12:58:41] 2026-03-10 11:57:37,126 | INFO     | aborting job monitoring since job object (job id=7045938453) has expired
[2026-03-10 12:58:41] 2026-03-10 11:57:38,074 | INFO     | --- collectZombieJob: --- 10, [2345305]
[2026-03-10 12:58:41] 2026-03-10 11:57:38,074 | INFO     | zombie collector waiting for pid 2345305
[2026-03-10 12:58:41] 2026-03-10 11:57:38,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 12:58:41] 2026-03-10 11:57:38,074 | INFO     | collected zombie processes
[2026-03-10 12:58:41] 2026-03-10 11:57:38,074 | INFO     | will attempt to kill all subprocesses of pid=2345305
[2026-03-10 12:58:41] 2026-03-10 11:57:38,464 | INFO     | process IDs to be killed: [2345305] (in reverse order)
[2026-03-10 12:58:41] 2026-03-10 11:57:38,595 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 12:58:41] 2026-03-10 11:57:38,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 12:58:41] 2026-03-10 11:57:38,608 | INFO     | did not find any defunct processes belonging to 2345305
[2026-03-10 12:58:41] 2026-03-10 11:57:38,620 | INFO     | did not find any defunct processes belonging to 2345305
[2026-03-10 12:58:41] 2026-03-10 11:57:38,620 | INFO     | ready for new job
[2026-03-10 12:58:41] 2026-03-10 11:57:38,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 12:58:41] 2026-03-10 11:57:38,623 | INFO     | **************************************
[2026-03-10 12:58:41] 2026-03-10 11:57:38,623 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 12:58:41] 2026-03-10 11:57:38,623 | INFO     | **************************************
[2026-03-10 12:58:41] 2026-03-10 11:57:38,623 | INFO     | 
[2026-03-10 12:58:41] 2026-03-10 11:57:38,627 | INFO     | architecture information:
[2026-03-10 12:58:41] 2026-03-10 11:57:38,627 | INFO     | executing command: cat /etc/os-release
[2026-03-10 12:58:41] 2026-03-10 11:57:38,643 | INFO     | cat /etc/os-release:
[2026-03-10 12:58:41] NAME="CentOS Linux"
[2026-03-10 12:58:41] VERSION="7 (Core)"
[2026-03-10 12:58:41] ID="centos"
[2026-03-10 12:58:41] ID_LIKE="rhel fedora"
[2026-03-10 12:58:41] VERSION_ID="7"
[2026-03-10 12:58:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 12:58:41] ANSI_COLOR="0;31"
[2026-03-10 12:58:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 12:58:41] HOME_URL="https://www.centos.org/"
[2026-03-10 12:58:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 12:58:41] 
[2026-03-10 12:58:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 12:58:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 12:58:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 12:58:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 12:58:41] 
[2026-03-10 12:58:41] 2026-03-10 11:57:38,644 | INFO     | **************************************
[2026-03-10 12:58:41] 2026-03-10 11:57:39,147 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/0
[2026-03-10 12:58:41] 2026-03-10 11:57:39,164 | INFO     | sufficient remaining disk space (19740491776 B)
[2026-03-10 12:58:41] 2026-03-10 11:57:39,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 12:58:41] 2026-03-10 11:57:39,165 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 12:58:41] 2026-03-10 11:57:39,165 | INFO     | update_server=False
[2026-03-10 12:58:41] 2026-03-10 11:57:39,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 12:58:41] 2026-03-10 11:57:39,308 | INFO     | all data control threads have been joined
[2026-03-10 12:58:41] 2026-03-10 11:57:39,629 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 12:58:41] 2026-03-10 11:57:39,629 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 12:58:41] 2026-03-10 11:57:39,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:58:41] 2026-03-10 11:57:39,629 | INFO     | will abort loop
[2026-03-10 12:58:41] 2026-03-10 11:57:39,701 | INFO     | all job control threads have been joined
[2026-03-10 12:58:41] 2026-03-10 11:57:40,170 | INFO     | [job] retrieve thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:40,260 | INFO     | all payload control threads have been joined
[2026-03-10 12:58:41] 2026-03-10 11:57:40,313 | INFO     | [data] control thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:40,376 | INFO     | [data] copytool_in thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:40,447 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:40,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 12:58:41] 2026-03-10 11:57:40,603 | INFO     | [payload] failed_post thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:40,634 | INFO     | [job] job monitor thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:40,706 | INFO     | [job] control thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:40,813 | INFO     | [job] validate thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:40,954 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:41,167 | INFO     | [payload] validate_post thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:41,265 | INFO     | [payload] control thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:41,396 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:41,523 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:41,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 12:58:41] 2026-03-10 11:57:42,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:58:41] 2026-03-10 11:57:42,513 | INFO     | [data] copytool_out thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:43,044 | INFO     | [job] queue monitor thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:57:45,835 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 12:58:41] 2026-03-10 11:58:09,841 | INFO     | PID=2340516 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 12:58:41] 2026-03-10 11:58:09,841 | INFO     | .. there are 13 such processes running
[2026-03-10 12:58:41] 2026-03-10 11:58:09,841 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 12:58:41] 2026-03-10 11:58:09,841 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 12:58:41] 2026-03-10 11:58:09,841 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 12:58:41] 2026-03-10 11:58:34,969 | INFO     | [monitor] cgroup control has ended
[2026-03-10 12:58:41] 2026-03-10 11:58:35,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23341108578112)>', '<ExcThread(monitor, started 23340787934976)>']
[2026-03-10 12:58:41] 2026-03-10 11:58:36,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 12:58:41] 2026-03-10 11:58:36,972 | INFO     | [monitor] control thread has ended
[2026-03-10 12:58:41] 2026-03-10 11:58:40,999 | INFO     | all workflow threads have been joined
[2026-03-10 12:58:41] 2026-03-10 11:58:40,999 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 12:58:41] 2026-03-10 11:58:40,999 | INFO     | traces error code: 0
[2026-03-10 12:58:41] 2026-03-10 11:58:40,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 12:58:41] 2026-03-10 11:58:41,134 [wrapper] ==== pilot stdout END ====
[2026-03-10 12:58:41] 2026-03-10 11:58:41,138 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 12:58:41] 2026-03-10 11:58:41,141 [wrapper] pilotpid: 2340516
[2026-03-10 12:58:41] 2026-03-10 11:58:41,144 [wrapper] Pilot exit status: 0
[2026-03-10 12:58:41] 2026-03-10 11:58:41,155 [wrapper] pandaids: 7045938453
[2026-03-10 12:58:41] 2026-03-10 11:58:41,234 [wrapper] cleanup supervisor_pilot 2679056 2340517
[2026-03-10 12:58:41] 2026-03-10 11:58:41,238 [wrapper] Test setup, not cleaning
[2026-03-10 12:58:41] 2026-03-10 11:58:41,241 [wrapper] apfmon messages muted
[2026-03-10 12:58:41] 2026-03-10 11:58:41,244 [wrapper] ==== wrapper stdout END ====
[2026-03-10 12:58:41] 2026-03-10 11:58:41,247 [wrapper] ==== wrapper stderr END ====
[2026-03-10 12:58:41]  *** Error codes and diagnostics ***
[2026-03-10 12:58:41]     "exeErrorCode": 0,
[2026-03-10 12:58:41]     "exeErrorDiag": "",
[2026-03-10 12:58:41]     "pilotErrorCode": 0,
[2026-03-10 12:58:41]     "pilotErrorDiag": "",
[2026-03-10 12:58:41]  *** Listing of results directory ***
[2026-03-10 12:58:41] total 409552
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc    584627 Mar  8 06:00 pilot3.tar.gz
[2026-03-10 12:58:41] -rwx------. 1 boinc boinc     36322 Mar  8 06:45 runpilot2-wrapper.sh
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc      5111 Mar  8 06:45 queuedata.json
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc       100 Mar 10 09:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 12:58:41] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 09:00 run_atlas
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc       105 Mar 10 09:00 job.xml
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc      6562 Mar 10 09:00 init_data.xml
[2026-03-10 12:58:41] -rw-r--r--. 2 boinc boinc 213694902 Mar 10 09:00 EVNT.48966985._000579.pool.root.1
[2026-03-10 12:58:41] -rw-r--r--. 2 boinc boinc     15845 Mar 10 09:00 start_atlas.sh
[2026-03-10 12:58:41] drwxrwx--x. 2 boinc boinc      4096 Mar 10 09:00 shared
[2026-03-10 12:58:41] -rw-r--r--. 2 boinc boinc    597974 Mar 10 09:00 input.tar.gz
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc         0 Mar 10 09:00 boinc_lockfile
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc      2589 Mar 10 09:00 pandaJob.out
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc   1005057 Mar 10 09:01 agis_schedconf.cvmfs.json
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc       451 Mar 10 09:01 workernode_map.json
[2026-03-10 12:58:41] drwx------. 5 boinc boinc      4096 Mar 10 09:01 pilot3
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc 196991046 Mar 10 12:56 HITS.48966988._015605.pool.root.1
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc       530 Mar 10 12:57 boinc_task_state.xml
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc        95 Mar 10 12:57 pilot_heartbeat.json
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc      1033 Mar 10 12:57 memory_monitor_summary.json
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc   1511578 Mar 10 12:57 agis_ddmendpoints.agis.ALL.json
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc    386845 Mar 10 12:57 log.48966988._015605.job.log.tgz.1
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc      6396 Mar 10 12:57 heartbeat.json
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc        28 Mar 10 12:58 wrapper_checkpoint.txt
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc      8192 Mar 10 12:58 boinc_mmap_file
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc      5015 Mar 10 12:58 pilotlog.txt
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc   1991881 Mar 10 12:58 log.48966988._015605.job.log.1
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc       357 Mar 10 12:58 output.list
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc       620 Mar 10 12:58 runtime_log
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc   2396160 Mar 10 12:58 result.tar.gz
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc      9205 Mar 10 12:58 runtime_log.err
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc       665 Mar 10 12:58 2C0LDm57LJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyvVLDmFNDtJn.diag
[2026-03-10 12:58:41] -rw-r--r--. 1 boinc boinc     20818 Mar 10 12:58 stderr.txt
[2026-03-10 12:58:41] HITS file was successfully produced:
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc 196991046 Mar 10 12:56 shared/HITS.pool.root.1
[2026-03-10 12:58:41]  *** Contents of shared directory: ***
[2026-03-10 12:58:41] total 404012
[2026-03-10 12:58:41] -rw-r--r--. 2 boinc boinc 213694902 Mar 10 09:00 ATLAS.root_0
[2026-03-10 12:58:41] -rw-r--r--. 2 boinc boinc     15845 Mar 10 09:00 start_atlas.sh
[2026-03-10 12:58:41] -rw-r--r--. 2 boinc boinc    597974 Mar 10 09:00 input.tar.gz
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc 196991046 Mar 10 12:56 HITS.pool.root.1
[2026-03-10 12:58:41] -rw-------. 1 boinc boinc   2396160 Mar 10 12:58 result.tar.gz
12:58:43 (2336351): run_atlas exited; CPU time 54267.487285
12:58:43 (2336351): called boinc_finish(0)

</stderr_txt>
]]>

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