Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:50:42 (551838): wrapper (7.7.26015): starting
05:50:42 (551838): wrapper: running run_atlas (--nthreads 2)
[2026-03-09 05:50:42] Arguments: --nthreads 2
[2026-03-09 05:50:42] Threads: 2
[2026-03-09 05:50:42] Checking for CVMFS
[2026-03-09 05:50:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 05:50:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 05:50:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 05:50:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 05:50:43] 2.9.2.0 3296841 16539 67960 157065 1 50 25689132 36864000 0 130560 0 4085377 99.972 612610 11988 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-09 05:50:43] CVMFS is ok
[2026-03-09 05:50:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 05:50:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 05:50:43] Further information can be found at the LHC@home message board.
[2026-03-09 05:50:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 05:50:43] Checking for apptainer binary...
[2026-03-09 05:50:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 05:50:43] Running /usr/bin/apptainer --version
[2026-03-09 05:50:43] apptainer version 1.4.1-1.1
[2026-03-09 05:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 05:50:43] thA354
[2026-03-09 05:50:43] apptainer works
[2026-03-09 05:50:43] Set ATHENA_PROC_NUMBER=2
[2026-03-09 05:50:43] Set ATHENA_CORE_NUMBER=2
[2026-03-09 05:50:43] Starting ATLAS job with PandaID=7039534223
[2026-03-09 05:50:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 07:51:22]  *** The last 200 lines of the pilot log: ***
[2026-03-09 07:51:22] 2026-03-09 06:50:40,270 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 07:51:22] 2026-03-09 06:50:40,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 07:51:22] 2026-03-09 06:50:40,270 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 07:51:22] 2026-03-09 06:50:40,270 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 07:51:22] 2026-03-09 06:50:40,271 | INFO     | fitting pss+swap vs Time
[2026-03-09 07:51:22] 2026-03-09 06:50:40,271 | INFO     | sum of square deviations: 509440249.5
[2026-03-09 07:51:22] 2026-03-09 06:50:40,271 | INFO     | sum of deviations: -13563721947.5
[2026-03-09 07:51:22] 2026-03-09 06:50:40,271 | INFO     | mean x: 1773035455.5
[2026-03-09 07:51:22] 2026-03-09 06:50:40,271 | INFO     | mean y: 2319435.194915254
[2026-03-09 07:51:22] 2026-03-09 06:50:40,271 | INFO     | intersect: 47208954452.872314
[2026-03-09 07:51:22] 2026-03-09 06:50:40,271 | INFO     | chi2: 2.3565137343521885
[2026-03-09 07:51:22] 2026-03-09 06:50:40,271 | INFO     | sum of square deviations: 447383272.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | sum of deviations: -6596815170.999993
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | mean x: 1773035303.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | mean y: 2336005.8230088498
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | intersect: 26146331361.887573
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | chi2: 1.735363919880853
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | current chi2=1.735363919880853 (change=26.358845502001333 %)
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | sum of square deviations: 390582207.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | sum of deviations: -6036421987.5
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | mean x: 1773035150.5
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | mean y: 2337513.3055555555
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | intersect: 27404477639.695316
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | chi2: 1.7329795751083281
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | current chi2=1.7329795751083281 (change=0.1373973922823416 %)
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | right removable region: 107
[2026-03-09 07:51:22] 2026-03-09 06:50:40,272 | INFO     | sum of square deviations: 447383272.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | sum of deviations: -27946814256.000004
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | mean x: 1773035608.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | mean y: 2353868.575221239
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | intersect: 110759058258.83243
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | chi2: 0.8909369084576483
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | current chi2=0.8909369084576483 (change=62.192585790187685 %)
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | sum of square deviations: 390582207.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | sum of deviations: -22460628281.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | mean x: 1773035760.5
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | mean y: 2339118.592592593
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | intersect: 101961661463.01941
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | chi2: 0.8733573181885594
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | current chi2=0.8733573181885594 (change=1.9731577064779897 %)
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | left removable region: 20
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | sum of square deviations: 204163828.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | sum of deviations: -4884244868.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | mean x: 1773035730.0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,273 | INFO     | mean y: 2323515.0689655175
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | intersect: 42418949172.348145
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | chi2: 0.1129005174976296
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | current memory leak: -23.92 B/s (using 87 data points, chi2=0.11)
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | could have reported an average CPU frequency of 4599 MHz (7 samples)
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | ..............................
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | . Timing measurements:
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | . get job = 0 s
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | . initial setup = 7 s
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | . payload setup = 8 s
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | . stage-in = 0 s
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | . payload execution = 7151 s
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | . stage-out = 0 s
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | . log creation = 0 s
[2026-03-09 07:51:22] 2026-03-09 06:50:40,274 | INFO     | ..............................
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | 
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | job summary report
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | --------------------------------------------------
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | PanDA job id: 7039534223
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | task id: 48955006
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | errors: (none)
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | pilot state: finished 
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | transexitcode: 0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | exeerrorcode: 0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | exeerrordiag: 
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | exitcode: 0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | exitmsg: OK
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | cpuconsumptiontime: 13889 s
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | nevents: 400
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | neventsw: 0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | pid: 560273
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | pgrp: 560273
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | corecount: 2
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | event service: False
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | sizes: {0: 2280233, 11: 2280233, 7163: 2307664, 7164: 2316861}
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | --------------------------------------------------
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | 
[2026-03-09 07:51:22] 2026-03-09 06:50:40,301 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | job 7039534223 has completed (purged errors)
[2026-03-09 07:51:22] 2026-03-09 06:50:40,313 | INFO     | overall cleanup function is called
[2026-03-09 07:51:22] 2026-03-09 06:50:41,319 | INFO     | --- collectZombieJob: --- 10, [560273]
[2026-03-09 07:51:22] 2026-03-09 06:50:41,319 | INFO     | zombie collector waiting for pid 560273
[2026-03-09 07:51:22] 2026-03-09 06:50:41,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 07:51:22] 2026-03-09 06:50:41,320 | INFO     | collected zombie processes
[2026-03-09 07:51:22] 2026-03-09 06:50:41,320 | INFO     | will attempt to kill all subprocesses of pid=560273
[2026-03-09 07:51:22] 2026-03-09 06:50:41,355 | INFO     | process IDs to be killed: [560273] (in reverse order)
[2026-03-09 07:51:22] 2026-03-09 06:50:41,377 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 07:51:22] 2026-03-09 06:50:41,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 07:51:22] 2026-03-09 06:50:41,378 | INFO     | did not find any defunct processes belonging to 560273
[2026-03-09 07:51:22] 2026-03-09 06:50:41,378 | INFO     | did not find any defunct processes belonging to 560273
[2026-03-09 07:51:22] 2026-03-09 06:50:41,378 | INFO     | ready for new job
[2026-03-09 07:51:22] 2026-03-09 06:50:41,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 07:51:22] 2026-03-09 06:50:41,379 | INFO     | **************************************
[2026-03-09 07:51:22] 2026-03-09 06:50:41,379 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 07:51:22] 2026-03-09 06:50:41,379 | INFO     | **************************************
[2026-03-09 07:51:22] 2026-03-09 06:50:41,379 | INFO     | 
[2026-03-09 07:51:22] 2026-03-09 06:50:41,379 | INFO     | architecture information:
[2026-03-09 07:51:22] 2026-03-09 06:50:41,379 | INFO     | executing command: cat /etc/os-release
[2026-03-09 07:51:22] 2026-03-09 06:50:41,388 | INFO     | cat /etc/os-release:
[2026-03-09 07:51:22] NAME="CentOS Linux"
[2026-03-09 07:51:22] VERSION="7 (Core)"
[2026-03-09 07:51:22] ID="centos"
[2026-03-09 07:51:22] ID_LIKE="rhel fedora"
[2026-03-09 07:51:22] VERSION_ID="7"
[2026-03-09 07:51:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 07:51:22] ANSI_COLOR="0;31"
[2026-03-09 07:51:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 07:51:22] HOME_URL="https://www.centos.org/"
[2026-03-09 07:51:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 07:51:22] 
[2026-03-09 07:51:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 07:51:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 07:51:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 07:51:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 07:51:22] 
[2026-03-09 07:51:22] 2026-03-09 06:50:41,388 | INFO     | **************************************
[2026-03-09 07:51:22] 2026-03-09 06:50:41,890 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-09 07:51:22] 2026-03-09 06:50:41,902 | INFO     | sufficient remaining disk space (495335768064 B)
[2026-03-09 07:51:22] 2026-03-09 06:50:41,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 07:51:22] 2026-03-09 06:50:41,902 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 07:51:22] 2026-03-09 06:50:41,902 | INFO     | update_server=False
[2026-03-09 07:51:22] 2026-03-09 06:50:41,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 07:51:22] 2026-03-09 06:50:41,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 07:51:22] 2026-03-09 06:50:41,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 07:51:22] 2026-03-09 06:50:42,086 | INFO     | all job control threads have been joined
[2026-03-09 07:51:22] 2026-03-09 06:50:42,311 | INFO     | all payload control threads have been joined
[2026-03-09 07:51:22] 2026-03-09 06:50:42,705 | INFO     | all data control threads have been joined
[2026-03-09 07:51:22] 2026-03-09 06:50:42,907 | INFO     | [job] queue monitor thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:42,908 | INFO     | [job] retrieve thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:43,076 | INFO     | [payload] failed_post thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:43,091 | INFO     | [job] control thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:43,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 07:51:22] 2026-03-09 06:50:43,317 | INFO     | [payload] control thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:43,571 | INFO     | [payload] validate_post thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:43,604 | INFO     | [job] validate thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:43,710 | INFO     | [data] control thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:43,780 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:43,824 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:43,824 | INFO     | [data] copytool_in thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:44,312 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:45,252 | INFO     | [data] copytool_out thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:45,278 | INFO     | job.realtimelogging is not enabled
[2026-03-09 07:51:22] 2026-03-09 06:50:45,560 | WARNING  | process 560273 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 07:51:22] 2026-03-09 06:50:45,584 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 07:51:22] 2026-03-09 06:50:45,613 | INFO     | number of running child processes to parent process 560273: 1
[2026-03-09 07:51:22] 2026-03-09 06:50:45,613 | INFO     | maximum number of monitored processes: 6
[2026-03-09 07:51:22] 2026-03-09 06:50:45,613 | INFO     | aborting job monitoring since job object (job id=7039534223) has expired
[2026-03-09 07:51:22] 2026-03-09 06:50:45,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 07:51:22] 2026-03-09 06:50:45,613 | INFO     | will abort loop
[2026-03-09 07:51:22] 2026-03-09 06:50:45,909 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:46,284 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:46,618 | INFO     | [job] job monitor thread has finished
[2026-03-09 07:51:22] 2026-03-09 06:50:56,681 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-03-09 07:51:22] 2026-03-09 06:51:11,563 | INFO     | PID=555864 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 07:51:22] 2026-03-09 06:51:11,563 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 07:51:22] 2026-03-09 06:51:11,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 07:51:22] 2026-03-09 06:51:11,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 07:51:22] 2026-03-09 06:51:15,513 | INFO     | [monitor] cgroup control has ended
[2026-03-09 07:51:22] 2026-03-09 06:51:16,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600099325760)>', '<ExcThread(monitor, started 140599747393280)>']
[2026-03-09 07:51:22] 2026-03-09 06:51:17,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 07:51:22] 2026-03-09 06:51:17,594 | INFO     | [monitor] control thread has ended
[2026-03-09 07:51:22] 2026-03-09 06:51:21,899 | INFO     | all workflow threads have been joined
[2026-03-09 07:51:22] 2026-03-09 06:51:21,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 07:51:22] 2026-03-09 06:51:21,900 | INFO     | traces error code: 0
[2026-03-09 07:51:22] 2026-03-09 06:51:21,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 07:51:22] 2026-03-09 06:51:21,941 [wrapper] ==== pilot stdout END ====
[2026-03-09 07:51:22] 2026-03-09 06:51:21,944 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 07:51:22] 2026-03-09 06:51:21,946 [wrapper] pilotpid: 555864
[2026-03-09 07:51:22] 2026-03-09 06:51:21,948 [wrapper] Pilot exit status: 0
[2026-03-09 07:51:22] 2026-03-09 06:51:21,954 [wrapper] pandaids: 7039534223
[2026-03-09 07:51:22] 2026-03-09 06:51:21,966 [wrapper] cleanup supervisor_pilot  565665 555865
[2026-03-09 07:51:22] 2026-03-09 06:51:21,968 [wrapper] Test setup, not cleaning
[2026-03-09 07:51:22] 2026-03-09 06:51:21,970 [wrapper] apfmon messages muted
[2026-03-09 07:51:22] 2026-03-09 06:51:21,972 [wrapper] ==== wrapper stdout END ====
[2026-03-09 07:51:22] 2026-03-09 06:51:21,974 [wrapper] ==== wrapper stderr END ====
[2026-03-09 07:51:22]  *** Error codes and diagnostics ***
[2026-03-09 07:51:22]     "exeErrorCode": 0,
[2026-03-09 07:51:22]     "exeErrorDiag": "",
[2026-03-09 07:51:22]     "pilotErrorCode": 0,
[2026-03-09 07:51:22]     "pilotErrorDiag": "",
[2026-03-09 07:51:22]  *** Listing of results directory ***
[2026-03-09 07:51:22] total 613840
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc    584627 Mar  8 06:00 pilot3.tar.gz
[2026-03-09 07:51:22] -rwx------ 1 boinc boinc     36322 Mar  8 06:12 runpilot2-wrapper.sh
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc      5111 Mar  8 06:13 queuedata.json
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc       100 Mar  9 05:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 07:51:22] -rwxr-xr-x 1 boinc boinc      7986 Mar  9 05:50 run_atlas
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc       105 Mar  9 05:50 job.xml
[2026-03-09 07:51:22] -rw-r--r-- 2 boinc boinc 435637495 Mar  9 05:50 EVNT.46701403._000476.pool.root.1
[2026-03-09 07:51:22] -rw-r--r-- 2 boinc boinc    597950 Mar  9 05:50 input.tar.gz
[2026-03-09 07:51:22] -rw-r--r-- 2 boinc boinc     15845 Mar  9 05:50 start_atlas.sh
[2026-03-09 07:51:22] drwxrwx--x 2 boinc boinc      4096 Mar  9 05:50 shared
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc         0 Mar  9 05:50 boinc_setup_complete
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc      6205 Mar  9 05:50 init_data.xml
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc         0 Mar  9 05:50 boinc_lockfile
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc      2564 Mar  9 05:50 pandaJob.out
[2026-03-09 07:51:22] -rw------- 1 boinc boinc    999108 Mar  9 05:50 agis_schedconf.cvmfs.json
[2026-03-09 07:51:22] -rw------- 1 boinc boinc   1511578 Mar  9 05:50 agis_ddmendpoints.agis.ALL.json
[2026-03-09 07:51:22] -rw------- 1 boinc boinc       419 Mar  9 05:51 workernode_map.json
[2026-03-09 07:51:22] drwx------ 5 boinc boinc      4096 Mar  9 05:51 pilot3
[2026-03-09 07:51:22] -rw------- 1 boinc boinc 186375419 Mar  9 07:50 HITS.48955006._023790.pool.root.1
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc       530 Mar  9 07:50 boinc_task_state.xml
[2026-03-09 07:51:22] -rw------- 1 boinc boinc        95 Mar  9 07:50 pilot_heartbeat.json
[2026-03-09 07:51:22] -rw------- 1 boinc boinc      1017 Mar  9 07:50 memory_monitor_summary.json
[2026-03-09 07:51:22] -rw------- 1 boinc boinc    288102 Mar  9 07:50 log.48955006._023790.job.log.tgz.1
[2026-03-09 07:51:22] -rw------- 1 boinc boinc      6304 Mar  9 07:50 heartbeat.json
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc        27 Mar  9 07:51 wrapper_checkpoint.txt
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc      8192 Mar  9 07:51 boinc_mmap_file
[2026-03-09 07:51:22] -rw------- 1 boinc boinc      5341 Mar  9 07:51 pilotlog.txt
[2026-03-09 07:51:22] -rw------- 1 boinc boinc   1030324 Mar  9 07:51 log.48955006._023790.job.log.1
[2026-03-09 07:51:22] -rw------- 1 boinc boinc       357 Mar  9 07:51 output.list
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc       620 Mar  9 07:51 runtime_log
[2026-03-09 07:51:22] -rw------- 1 boinc boinc   1331200 Mar  9 07:51 result.tar.gz
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc      8896 Mar  9 07:51 runtime_log.err
[2026-03-09 07:51:22] -rw------- 1 boinc boinc       657 Mar  9 07:51 QapKDmtcLJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRIYLDmvhDNcn.diag
[2026-03-09 07:51:22] -rw-r--r-- 1 boinc boinc     20991 Mar  9 07:51 stderr.txt
[2026-03-09 07:51:22] HITS file was successfully produced:
[2026-03-09 07:51:22] -rw------- 1 boinc boinc 186375419 Mar  9 07:50 shared/HITS.pool.root.1
[2026-03-09 07:51:22]  *** Contents of shared directory: ***
[2026-03-09 07:51:22] total 609344
[2026-03-09 07:51:22] -rw-r--r-- 2 boinc boinc 435637495 Mar  9 05:50 ATLAS.root_0
[2026-03-09 07:51:22] -rw-r--r-- 2 boinc boinc    597950 Mar  9 05:50 input.tar.gz
[2026-03-09 07:51:22] -rw-r--r-- 2 boinc boinc     15845 Mar  9 05:50 start_atlas.sh
[2026-03-09 07:51:22] -rw------- 1 boinc boinc 186375419 Mar  9 07:50 HITS.pool.root.1
[2026-03-09 07:51:22] -rw------- 1 boinc boinc   1331200 Mar  9 07:51 result.tar.gz
07:51:23 (551838): run_atlas exited; CPU time 13923.992104
07:51:23 (551838): called boinc_finish(0)

</stderr_txt>
]]>

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