Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:58:25 (2790218): wrapper (7.7.26015): starting
01:58:25 (2790218): wrapper: running run_atlas (--nthreads 9)
[2026-03-08 01:58:25] Arguments: --nthreads 9
[2026-03-08 01:58:25] Threads: 9
[2026-03-08 01:58:25] Checking for CVMFS
[2026-03-08 01:58:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 01:58:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 01:58:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 01:58:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 01:58:25] 2.13.3.0 388524 100089 105464 157030 0 50 27496456 32515072 0 16776704 0 46772571 99.984 3497757 41302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-08 01:58:25] CVMFS is ok
[2026-03-08 01:58:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 01:58:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 01:58:25] Further information can be found at the LHC@home message board.
[2026-03-08 01:58:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 01:58:25] Checking for apptainer binary...
[2026-03-08 01:58:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 01:58:25] Running /usr/bin/apptainer --version
[2026-03-08 01:58:25] apptainer version 1.4.5-3.el9
[2026-03-08 01:58:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 01:58:25] c-205-38.aglt2.org
[2026-03-08 01:58:25] apptainer works
[2026-03-08 01:58:25] Set ATHENA_PROC_NUMBER=9
[2026-03-08 01:58:25] Set ATHENA_CORE_NUMBER=9
[2026-03-08 01:58:25] Starting ATLAS job with PandaID=7039126519
[2026-03-08 01:58:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 03:42:42]  *** The last 200 lines of the pilot log: ***
[2026-03-08 03:42:42]  filesize=308179
[2026-03-08 03:42:42]  filetype=log
[2026-03-08 03:42:42]  guid=1287cc5b-e245-40a8-aa54-118e7385a2e0
[2026-03-08 03:42:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-08 03:42:42]  is_altstaged=None
[2026-03-08 03:42:42]  is_tar=False
[2026-03-08 03:42:42]  lfn=log.48955010._011766.job.log.tgz.1
[2026-03-08 03:42:42]  mtime=0
[2026-03-08 03:42:42]  protocol_id=None
[2026-03-08 03:42:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 03:42:42]  replicas=None
[2026-03-08 03:42:42]  scope=mc23_13p6TeV
[2026-03-08 03:42:42]  status=None
[2026-03-08 03:42:42]  status_code=0
[2026-03-08 03:42:42]  storage_token=
[2026-03-08 03:42:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7039126519/log.48955010._011766.job.log.tgz.1
[2026-03-08 03:42:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/da/log.48955010._011766.job.log.tgz.1
[2026-03-08 03:42:42]  workdir=None
[2026-03-08 03:42:42] ]
[2026-03-08 03:42:42] 2026-03-08 07:41:53,116 | INFO     | transferring file log.48955010._011766.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7039126519/log.48955010._011766.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-08 03:42:42] 2026-03-08 07:41:53,116 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7039126519/log.48955010._011766.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._011766.job
[2026-03-08 03:42:42] 2026-03-08 07:41:53,123 | INFO     | adding to output.list: log.48955010._011766.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/da/log.48955010._011766.job.log.tg
[2026-03-08 03:42:42] 2026-03-08 07:41:53,124 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 03:42:42] 2026-03-08 07:41:53,124 | INFO     | summary of transferred files:
[2026-03-08 03:42:42] 2026-03-08 07:41:53,124 | INFO     |  -- lfn=log.48955010._011766.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 03:42:42] 2026-03-08 07:41:53,124 | INFO     | stage-out finished correctly
[2026-03-08 03:42:42] 2026-03-08 07:41:54,202 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 03:42:42] 2026-03-08 07:41:54,917 | INFO     | time since job start (2600s) is within the limit (349056.0s)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,118 | INFO     | monitor loop #204: job 0:7039126519 is in state 'finished'
[2026-03-08 03:42:42] 2026-03-08 07:41:55,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,629 | INFO     | job 7039126519 has state=finished
[2026-03-08 03:42:42] 2026-03-08 07:41:55,629 | INFO     | preparing for final server update for job 7039126519 in state='finished'
[2026-03-08 03:42:42] 2026-03-08 07:41:55,629 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7039126519/jobReport.json
[2026-03-08 03:42:42] 2026-03-08 07:41:55,630 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-08 03:42:42] 2026-03-08 07:41:55,631 | INFO     | this job has now completed (state=finished)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,631 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,631 | INFO     | log transfer has been attempted: DONE
[2026-03-08 03:42:42] 2026-03-08 07:41:55,631 | INFO     | job 7039126519 has finished - writing final server update
[2026-03-08 03:42:42] 2026-03-08 07:41:55,631 | INFO     | total number of processed events: 400 (read)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,633 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7039126519/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,633 | INFO     | extracted standard info from prmon json
[2026-03-08 03:42:42] 2026-03-08 07:41:55,633 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 03:42:42] 2026-03-08 07:41:55,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 03:42:42] 2026-03-08 07:41:55,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 03:42:42] 2026-03-08 07:41:55,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 03:42:42] 2026-03-08 07:41:55,634 | INFO     | fitting pss+swap vs Time
[2026-03-08 03:42:42] 2026-03-08 07:41:55,634 | INFO     | sum of square deviations: 14456085.0
[2026-03-08 03:42:42] 2026-03-08 07:41:55,634 | INFO     | sum of deviations: -1359763291.5
[2026-03-08 03:42:42] 2026-03-08 07:41:55,634 | INFO     | mean x: 1772954502.5
[2026-03-08 03:42:42] 2026-03-08 07:41:55,634 | INFO     | mean y: 2652701.5833333335
[2026-03-08 03:42:42] 2026-03-08 07:41:55,634 | INFO     | intersect: 166769688866.57162
[2026-03-08 03:42:42] 2026-03-08 07:41:55,634 | INFO     | chi2: 0.06103086413353356
[2026-03-08 03:42:42] 2026-03-08 07:41:55,634 | INFO     | current memory leak: -94.06 B/s (using 36 data points, chi2=0.06)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | could have reported an average CPU frequency of 2886 MHz (5 samples)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | ..............................
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | . Timing measurements:
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | . get job = 0 s
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | . initial setup = 4 s
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | . payload setup = 2 s
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | . stage-in = 0 s
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | . payload execution = 2580 s
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | . stage-out = 0 s
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | . log creation = 0 s
[2026-03-08 03:42:42] 2026-03-08 07:41:55,635 | INFO     | ..............................
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | 
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | job summary report
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | --------------------------------------------------
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | PanDA job id: 7039126519
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | task id: 48955010
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | errors: (none)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | pilot state: finished 
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | transexitcode: 0
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | exeerrorcode: 0
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | exeerrordiag: 
[2026-03-08 03:42:42] 2026-03-08 07:41:55,674 | INFO     | exitcode: 0
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | exitmsg: OK
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | cpuconsumptiontime: 21318 s
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | nevents: 400
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | neventsw: 0
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | pid: 2798416
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | pgrp: 2798416
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | corecount: 9
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | event service: False
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | sizes: {0: 2295752, 11: 2295752, 2586: 2321024, 2588: 2330022, 2589: 2330078, 2590: 2330304}
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | --------------------------------------------------
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | 
[2026-03-08 03:42:42] 2026-03-08 07:41:55,675 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | job 7039126519 has completed (purged errors)
[2026-03-08 03:42:42] 2026-03-08 07:41:55,686 | INFO     | overall cleanup function is called
[2026-03-08 03:42:42] 2026-03-08 07:41:56,693 | INFO     | --- collectZombieJob: --- 10, [2798416]
[2026-03-08 03:42:42] 2026-03-08 07:41:56,693 | INFO     | zombie collector waiting for pid 2798416
[2026-03-08 03:42:42] 2026-03-08 07:41:56,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 03:42:42] 2026-03-08 07:41:56,693 | INFO     | collected zombie processes
[2026-03-08 03:42:42] 2026-03-08 07:41:56,693 | INFO     | will attempt to kill all subprocesses of pid=2798416
[2026-03-08 03:42:42] 2026-03-08 07:41:56,753 | INFO     | process IDs to be killed: [2798416] (in reverse order)
[2026-03-08 03:42:42] 2026-03-08 07:41:56,773 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 03:42:42] 2026-03-08 07:41:56,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 03:42:42] 2026-03-08 07:41:56,774 | INFO     | did not find any defunct processes belonging to 2798416
[2026-03-08 03:42:42] 2026-03-08 07:41:56,776 | INFO     | did not find any defunct processes belonging to 2798416
[2026-03-08 03:42:42] 2026-03-08 07:41:56,776 | INFO     | ready for new job
[2026-03-08 03:42:42] 2026-03-08 07:41:56,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 03:42:42] 2026-03-08 07:41:56,777 | INFO     | **************************************
[2026-03-08 03:42:42] 2026-03-08 07:41:56,777 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 03:42:42] 2026-03-08 07:41:56,777 | INFO     | **************************************
[2026-03-08 03:42:42] 2026-03-08 07:41:56,777 | INFO     | 
[2026-03-08 03:42:42] 2026-03-08 07:41:56,778 | INFO     | architecture information:
[2026-03-08 03:42:42] 2026-03-08 07:41:56,778 | INFO     | executing command: cat /etc/os-release
[2026-03-08 03:42:42] 2026-03-08 07:41:56,784 | INFO     | cat /etc/os-release:
[2026-03-08 03:42:42] NAME="CentOS Linux"
[2026-03-08 03:42:42] VERSION="7 (Core)"
[2026-03-08 03:42:42] ID="centos"
[2026-03-08 03:42:42] ID_LIKE="rhel fedora"
[2026-03-08 03:42:42] VERSION_ID="7"
[2026-03-08 03:42:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 03:42:42] ANSI_COLOR="0;31"
[2026-03-08 03:42:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 03:42:42] HOME_URL="https://www.centos.org/"
[2026-03-08 03:42:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 03:42:42] 
[2026-03-08 03:42:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 03:42:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 03:42:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 03:42:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 03:42:42] 
[2026-03-08 03:42:42] 2026-03-08 07:41:56,784 | INFO     | **************************************
[2026-03-08 03:42:42] 2026-03-08 07:41:57,287 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-08 03:42:42] 2026-03-08 07:41:57,293 | INFO     | sufficient remaining disk space (20372783104 B)
[2026-03-08 03:42:42] 2026-03-08 07:41:57,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 03:42:42] 2026-03-08 07:41:57,293 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 03:42:42] 2026-03-08 07:41:57,293 | INFO     | update_server=False
[2026-03-08 03:42:42] 2026-03-08 07:41:57,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 03:42:42] 2026-03-08 07:41:57,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 03:42:42] 2026-03-08 07:41:57,621 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-08 03:42:42] 2026-03-08 07:41:57,621 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-08 03:42:42] 2026-03-08 07:41:57,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 03:42:42] 2026-03-08 07:41:57,621 | INFO     | will abort loop
[2026-03-08 03:42:42] 2026-03-08 07:41:57,786 | INFO     | all payload control threads have been joined
[2026-03-08 03:42:42] 2026-03-08 07:41:57,985 | INFO     | all job control threads have been joined
[2026-03-08 03:42:42] 2026-03-08 07:41:58,283 | INFO     | all data control threads have been joined
[2026-03-08 03:42:42] 2026-03-08 07:41:58,299 | INFO     | [job] retrieve thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:58,299 | INFO     | [job] queue monitor thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:58,626 | INFO     | [job] job monitor thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:58,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 03:42:42] 2026-03-08 07:41:58,725 | INFO     | [payload] validate_post thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:58,792 | INFO     | [payload] control thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:58,991 | INFO     | [job] control thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:59,053 | INFO     | [job] validate thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:59,134 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:59,254 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:59,289 | INFO     | [data] control thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:59,298 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:59,375 | INFO     | [data] copytool_in thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:59,440 | INFO     | [payload] failed_post thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:41:59,787 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:42:00,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 03:42:42] 2026-03-08 07:42:00,681 | INFO     | [data] copytool_out thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:42:04,253 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 03:42:42] 2026-03-08 07:42:28,063 | INFO     | PID=2793916 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 03:42:42] 2026-03-08 07:42:28,063 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 03:42:42] 2026-03-08 07:42:28,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 03:42:42] 2026-03-08 07:42:28,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 03:42:42] 2026-03-08 07:42:36,576 | INFO     | [monitor] cgroup control has ended
[2026-03-08 03:42:42] 2026-03-08 07:42:37,723 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245850351424)>', '<ExcThread(monitor, started 140245328697088)>']
[2026-03-08 03:42:42] 2026-03-08 07:42:38,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 03:42:42] 2026-03-08 07:42:38,112 | INFO     | [monitor] control thread has ended
[2026-03-08 03:42:42] 2026-03-08 07:42:42,737 | INFO     | all workflow threads have been joined
[2026-03-08 03:42:42] 2026-03-08 07:42:42,737 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 03:42:42] 2026-03-08 07:42:42,737 | INFO     | traces error code: 0
[2026-03-08 03:42:42] 2026-03-08 07:42:42,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 03:42:42] 2026-03-08 07:42:42,790 [wrapper] ==== pilot stdout END ====
[2026-03-08 03:42:42] 2026-03-08 07:42:42,791 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 03:42:42] 2026-03-08 07:42:42,793 [wrapper] pilotpid: 2793916
[2026-03-08 03:42:42] 2026-03-08 07:42:42,794 [wrapper] Pilot exit status: 0
[2026-03-08 03:42:42] 2026-03-08 07:42:42,799 [wrapper] pandaids: 7039126519
[2026-03-08 03:42:42] 2026-03-08 07:42:42,812 [wrapper] cleanup supervisor_pilot 2819706 2793917
[2026-03-08 03:42:42] 2026-03-08 07:42:42,814 [wrapper] Test setup, not cleaning
[2026-03-08 03:42:42] 2026-03-08 07:42:42,815 [wrapper] apfmon messages muted
[2026-03-08 03:42:42] 2026-03-08 07:42:42,816 [wrapper] ==== wrapper stdout END ====
[2026-03-08 03:42:42] 2026-03-08 07:42:42,818 [wrapper] ==== wrapper stderr END ====
[2026-03-08 03:42:42]  *** Error codes and diagnostics ***
[2026-03-08 03:42:42]     "exeErrorCode": 0,
[2026-03-08 03:42:42]     "exeErrorDiag": "",
[2026-03-08 03:42:42]     "pilotErrorCode": 0,
[2026-03-08 03:42:42]     "pilotErrorDiag": "",
[2026-03-08 03:42:42]  *** Listing of results directory ***
[2026-03-08 03:42:42] total 619816
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas    584627 Mar  7 09:01 pilot3.tar.gz
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas      5111 Mar  7 09:07 queuedata.json
[2026-03-08 03:42:42] -rwx------. 1 boincer umatlas     36322 Mar  7 09:08 runpilot2-wrapper.sh
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas       100 Mar  8 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 03:42:42] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 01:58 run_atlas
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas       105 Mar  8 01:58 job.xml
[2026-03-08 03:42:42] -rw-r--r--. 2 boincer umatlas 441943557 Mar  8 01:58 EVNT.46701403._001236.pool.root.1
[2026-03-08 03:42:42] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 01:58 start_atlas.sh
[2026-03-08 03:42:42] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 01:58 shared
[2026-03-08 03:42:42] -rw-r--r--. 2 boincer umatlas    597955 Mar  8 01:58 input.tar.gz
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas         0 Mar  8 01:58 boinc_lockfile
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas      2562 Mar  8 01:58 pandaJob.out
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas    999169 Mar  8 01:58 agis_schedconf.cvmfs.json
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas   1521291 Mar  8 01:58 agis_ddmendpoints.agis.ALL.json
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas       440 Mar  8 01:58 workernode_map.json
[2026-03-08 03:42:42] drwx------. 5 boincer umatlas      4096 Mar  8 01:58 pilot3
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas      6530 Mar  8 03:38 init_data.xml
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas 187391253 Mar  8 03:41 HITS.48955010._011766.pool.root.1
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas       530 Mar  8 03:41 boinc_task_state.xml
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas        95 Mar  8 03:41 pilot_heartbeat.json
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas      1030 Mar  8 03:41 memory_monitor_summary.json
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas    308179 Mar  8 03:41 log.48955010._011766.job.log.tgz.1
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas      6372 Mar  8 03:41 heartbeat.json
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 03:42 boinc_mmap_file
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas        27 Mar  8 03:42 wrapper_checkpoint.txt
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas      4930 Mar  8 03:42 pilotlog.txt
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas    404390 Mar  8 03:42 log.48955010._011766.job.log.1
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas       357 Mar  8 03:42 output.list
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas       620 Mar  8 03:42 runtime_log
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas    727040 Mar  8 03:42 result.tar.gz
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas      8816 Mar  8 03:42 runtime_log.err
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas       649 Mar  8 03:42 lAAMDm9U7I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmB7VLDmbSKDQm.diag
[2026-03-08 03:42:42] -rw-r--r--. 1 boincer umatlas     21221 Mar  8 03:42 stderr.txt
[2026-03-08 03:42:42] HITS file was successfully produced:
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas 187391253 Mar  8 03:41 shared/HITS.pool.root.1
[2026-03-08 03:42:42]  *** Contents of shared directory: ***
[2026-03-08 03:42:42] total 615904
[2026-03-08 03:42:42] -rw-r--r--. 2 boincer umatlas 441943557 Mar  8 01:58 ATLAS.root_0
[2026-03-08 03:42:42] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 01:58 start_atlas.sh
[2026-03-08 03:42:42] -rw-r--r--. 2 boincer umatlas    597955 Mar  8 01:58 input.tar.gz
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas 187391253 Mar  8 03:41 HITS.pool.root.1
[2026-03-08 03:42:42] -rw-------. 1 boincer umatlas    727040 Mar  8 03:42 result.tar.gz
03:42:43 (2790218): run_atlas exited; CPU time 21322.861840
03:42:43 (2790218): called boinc_finish(0)

</stderr_txt>
]]>

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