Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:34:38 (2528312): wrapper (7.7.26015): starting
20:34:38 (2528312): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 20:34:38] Arguments: --nthreads 4
[2026-03-09 20:34:38] Threads: 4
[2026-03-09 20:34:38] Checking for CVMFS
[2026-03-09 20:34:38] No cvmfs_config command found, will try listing directly
[2026-03-09 20:34:38] CVMFS is ok
[2026-03-09 20:34:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 20:34:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 20:34:38] Further information can be found at the LHC@home message board.
[2026-03-09 20:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 20:34:38] Checking for apptainer binary...
[2026-03-09 20:34:38] which: no apptainer in ((null))
[2026-03-09 20:34:38] apptainer is not installed, using version from CVMFS
[2026-03-09 20:34:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 20:34:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot172/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-09 20:34:38] apptainer works
[2026-03-09 20:34:38] Set ATHENA_PROC_NUMBER=4
[2026-03-09 20:34:38] Set ATHENA_CORE_NUMBER=4
[2026-03-09 20:34:39] Starting ATLAS job with PandaID=7045871943
[2026-03-09 20:34:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot172/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 22:27:06]  *** The last 200 lines of the pilot log: ***
[2026-03-09 22:27:06] 2026-03-09 21:26:18,317 | INFO     | log transfer has been attempted: DONE
[2026-03-09 22:27:06] 2026-03-09 21:26:18,317 | INFO     | job 7045871943 has finished - writing final server update
[2026-03-09 22:27:06] 2026-03-09 21:26:18,318 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1892196/.job.ad'
[2026-03-09 22:27:06] 2026-03-09 21:26:18,318 | INFO     | total number of processed events: 400 (read)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,335 | INFO     | using path: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7045871943/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,336 | INFO     | extracted standard info from prmon json
[2026-03-09 22:27:06] 2026-03-09 21:26:18,336 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 22:27:06] 2026-03-09 21:26:18,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 22:27:06] 2026-03-09 21:26:18,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 22:27:06] 2026-03-09 21:26:18,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 22:27:06] 2026-03-09 21:26:18,337 | INFO     | fitting pss+swap vs Time
[2026-03-09 22:27:06] 2026-03-09 21:26:18,338 | INFO     | sum of square deviations: 412686807.5
[2026-03-09 22:27:06] 2026-03-09 21:26:18,338 | INFO     | sum of deviations: 4415316914.499999
[2026-03-09 22:27:06] 2026-03-09 21:26:18,338 | INFO     | mean x: 1773088233.5
[2026-03-09 22:27:06] 2026-03-09 21:26:18,338 | INFO     | mean y: 2309294.7545454544
[2026-03-09 22:27:06] 2026-03-09 21:26:18,338 | INFO     | intersect: -18967879056.307472
[2026-03-09 22:27:06] 2026-03-09 21:26:18,338 | INFO     | chi2: 1.9304822510784665
[2026-03-09 22:27:06] 2026-03-09 21:26:18,338 | INFO     | sum of square deviations: 358927660.0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | sum of deviations: 10919898469.0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | mean x: 1773088081.0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | mean y: 2327019.3047619048
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | intersect: -53941528467.10174
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | chi2: 1.1203964580104813
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | current chi2=1.1203964580104813 (change=41.96287184797632 %)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | sum of deviations: 10321592931.5
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | mean x: 1773087928.5
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | mean y: 2325151.03
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | intersect: -59023491958.174324
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | chi2: 1.1222071264178803
[2026-03-09 22:27:06] 2026-03-09 21:26:18,339 | INFO     | current chi2=1.1222071264178803 (change=-0.16160961545829303 %)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | right removable region: 99
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | sum of square deviations: 358927660.0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | sum of deviations: -6262658207.999999
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | mean x: 1773088386.0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | mean y: 2338709.0761904763
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | intersect: 30939621542.314426
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | chi2: 0.8420242978733591
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | current chi2=0.8420242978733591 (change=56.382696737928505 %)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,340 | INFO     | sum of deviations: -6379823073.5
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | mean x: 1773088538.5
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | mean y: 2339062.27
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | intersect: 36486474987.651924
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | chi2: 0.8424313345914531
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | current chi2=0.8424313345914531 (change=-0.048340258009427955 %)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | left removable region: 20
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | sum of square deviations: 152858680.0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | sum of deviations: 2100534.9999999423
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | mean x: 1773088508.0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | mean y: 2359644.189873418
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | intersect: -22005569.935694575
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | chi2: 6.660498383021554e-05
[2026-03-09 22:27:06] 2026-03-09 21:26:18,341 | INFO     | current memory leak: 0.01 B/s (using 79 data points, chi2=0.00)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | could have reported an average CPU frequency of 3630 MHz (7 samples)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | ..............................
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | . Timing measurements:
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | . get job = 0 s
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | . initial setup = 4 s
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | . payload setup = 4 s
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | . stage-in = 0 s
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | . payload execution = 6662 s
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | . stage-out = 0 s
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | . log creation = 0 s
[2026-03-09 22:27:06] 2026-03-09 21:26:18,342 | INFO     | ..............................
[2026-03-09 22:27:06] 2026-03-09 21:26:18,857 | INFO     | 
[2026-03-09 22:27:06] 2026-03-09 21:26:18,857 | INFO     | job summary report
[2026-03-09 22:27:06] 2026-03-09 21:26:18,857 | INFO     | --------------------------------------------------
[2026-03-09 22:27:06] 2026-03-09 21:26:18,857 | INFO     | PanDA job id: 7045871943
[2026-03-09 22:27:06] 2026-03-09 21:26:18,857 | INFO     | task id: 48997926
[2026-03-09 22:27:06] 2026-03-09 21:26:18,857 | INFO     | errors: (none)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,857 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 22:27:06] 2026-03-09 21:26:18,857 | INFO     | pilot state: finished 
[2026-03-09 22:27:06] 2026-03-09 21:26:18,857 | INFO     | transexitcode: 0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | exeerrorcode: 0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | exeerrordiag: 
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | exitcode: 0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | exitmsg: OK
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | cpuconsumptiontime: 25825 s
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | nevents: 400
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | neventsw: 0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | pid: 2556443
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | pgrp: 2556443
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | corecount: 4
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | event service: False
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | sizes: {0: 2280278, 11: 2280278, 6670: 2307443, 6672: 2316465, 6675: 2316521, 6677: 2316715}
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | --------------------------------------------------
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | 
[2026-03-09 22:27:06] 2026-03-09 21:26:18,858 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot172/slots/0
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,879 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 22:27:06] 2026-03-09 21:26:18,880 | INFO     | job 7045871943 has completed (purged errors)
[2026-03-09 22:27:06] 2026-03-09 21:26:18,880 | INFO     | overall cleanup function is called
[2026-03-09 22:27:06] 2026-03-09 21:26:19,886 | INFO     | --- collectZombieJob: --- 10, [2556443]
[2026-03-09 22:27:06] 2026-03-09 21:26:19,886 | INFO     | zombie collector waiting for pid 2556443
[2026-03-09 22:27:06] 2026-03-09 21:26:19,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 22:27:06] 2026-03-09 21:26:19,886 | INFO     | collected zombie processes
[2026-03-09 22:27:06] 2026-03-09 21:26:19,886 | INFO     | will attempt to kill all subprocesses of pid=2556443
[2026-03-09 22:27:06] 2026-03-09 21:26:20,285 | INFO     | process IDs to be killed: [2556443] (in reverse order)
[2026-03-09 22:27:06] 2026-03-09 21:26:20,482 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 22:27:06] 2026-03-09 21:26:20,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 22:27:06] 2026-03-09 21:26:20,507 | INFO     | did not find any defunct processes belonging to 2556443
[2026-03-09 22:27:06] 2026-03-09 21:26:20,531 | INFO     | did not find any defunct processes belonging to 2556443
[2026-03-09 22:27:06] 2026-03-09 21:26:20,531 | INFO     | ready for new job
[2026-03-09 22:27:06] 2026-03-09 21:26:20,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 22:27:06] 2026-03-09 21:26:20,532 | INFO     | **************************************
[2026-03-09 22:27:06] 2026-03-09 21:26:20,532 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 22:27:06] 2026-03-09 21:26:20,532 | INFO     | **************************************
[2026-03-09 22:27:06] 2026-03-09 21:26:20,532 | INFO     | 
[2026-03-09 22:27:06] 2026-03-09 21:26:20,538 | INFO     | architecture information:
[2026-03-09 22:27:06] 2026-03-09 21:26:20,538 | INFO     | executing command: cat /etc/os-release
[2026-03-09 22:27:06] 2026-03-09 21:26:20,552 | INFO     | cat /etc/os-release:
[2026-03-09 22:27:06] NAME="CentOS Linux"
[2026-03-09 22:27:06] VERSION="7 (Core)"
[2026-03-09 22:27:06] ID="centos"
[2026-03-09 22:27:06] ID_LIKE="rhel fedora"
[2026-03-09 22:27:06] VERSION_ID="7"
[2026-03-09 22:27:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 22:27:06] ANSI_COLOR="0;31"
[2026-03-09 22:27:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 22:27:06] HOME_URL="https://www.centos.org/"
[2026-03-09 22:27:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 22:27:06] 
[2026-03-09 22:27:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 22:27:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 22:27:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 22:27:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 22:27:06] 
[2026-03-09 22:27:06] 2026-03-09 21:26:20,552 | INFO     | **************************************
[2026-03-09 22:27:06] 2026-03-09 21:26:21,055 | INFO     | executing command: df -mP /var/lib/boinc/var/slot172/slots/0
[2026-03-09 22:27:06] 2026-03-09 21:26:21,069 | INFO     | sufficient remaining disk space (19787677696 B)
[2026-03-09 22:27:06] 2026-03-09 21:26:21,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 22:27:06] 2026-03-09 21:26:21,069 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 22:27:06] 2026-03-09 21:26:21,069 | INFO     | update_server=False
[2026-03-09 22:27:06] 2026-03-09 21:26:21,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 22:27:06] 2026-03-09 21:26:21,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 22:27:06] 2026-03-09 21:26:21,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 22:27:06] 2026-03-09 21:26:21,070 | INFO     | aborting loop
[2026-03-09 22:27:06] 2026-03-09 21:26:21,253 | INFO     | all payload control threads have been joined
[2026-03-09 22:27:06] 2026-03-09 21:26:21,512 | INFO     | all job control threads have been joined
[2026-03-09 22:27:06] 2026-03-09 21:26:21,662 | INFO     | all data control threads have been joined
[2026-03-09 22:27:06] 2026-03-09 21:26:22,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 22:27:06] 2026-03-09 21:26:22,073 | INFO     | [job] retrieve thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:22,075 | INFO     | [job] job monitor thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:22,258 | INFO     | [payload] control thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:22,318 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:22,514 | INFO     | [job] control thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:22,666 | INFO     | [data] control thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:22,921 | INFO     | [job] validate thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:23,076 | INFO     | [data] copytool_out thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:23,076 | INFO     | [payload] validate_post thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:23,149 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:23,192 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:23,357 | INFO     | [data] copytool_in thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:23,365 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:23,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 22:27:06] 2026-03-09 21:26:23,543 | INFO     | [payload] failed_post thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:24,406 | INFO     | [job] queue monitor thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:26,017 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 22:27:06] 2026-03-09 21:26:50,469 | INFO     | PID=2533535 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 22:27:06] 2026-03-09 21:26:50,469 | INFO     | .. there are 56 such processes running
[2026-03-09 22:27:06] 2026-03-09 21:26:50,470 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 22:27:06] 2026-03-09 21:26:50,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 22:27:06] 2026-03-09 21:26:50,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 22:27:06] 2026-03-09 21:27:00,284 | INFO     | [monitor] cgroup control has ended
[2026-03-09 22:27:06] 2026-03-09 21:27:01,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22660244592448)>', '<ExcThread(monitor, started 22660007606016)>']
[2026-03-09 22:27:06] 2026-03-09 21:27:01,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 22:27:06] 2026-03-09 21:27:01,518 | INFO     | [monitor] control thread has ended
[2026-03-09 22:27:06] 2026-03-09 21:27:06,314 | INFO     | all workflow threads have been joined
[2026-03-09 22:27:06] 2026-03-09 21:27:06,314 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 22:27:06] 2026-03-09 21:27:06,315 | INFO     | traces error code: 0
[2026-03-09 22:27:06] 2026-03-09 21:27:06,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 22:27:06] 2026-03-09 21:27:06,509 [wrapper] ==== pilot stdout END ====
[2026-03-09 22:27:06] 2026-03-09 21:27:06,512 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 22:27:06] 2026-03-09 21:27:06,514 [wrapper] pilotpid: 2533535
[2026-03-09 22:27:06] 2026-03-09 21:27:06,516 [wrapper] Pilot exit status: 0
[2026-03-09 22:27:06] 2026-03-09 21:27:06,524 [wrapper] pandaids: 7045871943
[2026-03-09 22:27:06] 2026-03-09 21:27:06,630 [wrapper] cleanup supervisor_pilot 3621397 2533536
[2026-03-09 22:27:06] 2026-03-09 21:27:06,632 [wrapper] Test setup, not cleaning
[2026-03-09 22:27:06] 2026-03-09 21:27:06,635 [wrapper] apfmon messages muted
[2026-03-09 22:27:06] 2026-03-09 21:27:06,637 [wrapper] ==== wrapper stdout END ====
[2026-03-09 22:27:06] 2026-03-09 21:27:06,639 [wrapper] ==== wrapper stderr END ====
[2026-03-09 22:27:06]  *** Error codes and diagnostics ***
[2026-03-09 22:27:06]     "exeErrorCode": 0,
[2026-03-09 22:27:06]     "exeErrorDiag": "",
[2026-03-09 22:27:06]     "pilotErrorCode": 0,
[2026-03-09 22:27:06]     "pilotErrorDiag": "",
[2026-03-09 22:27:06]  *** Listing of results directory ***
[2026-03-09 22:27:06] total 602636
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc      5111 Mar  8 06:00 queuedata.json
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc    584627 Mar  8 06:00 pilot3.tar.gz
[2026-03-09 22:27:06] -rwx------. 1 boinc boinc     36322 Mar  8 06:01 runpilot2-wrapper.sh
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc       100 Mar  9 20:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 22:27:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 20:34 run_atlas
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc       105 Mar  9 20:34 job.xml
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc      6709 Mar  9 20:34 init_data.xml
[2026-03-09 22:27:06] -rw-r--r--. 2 boinc boinc 342554943 Mar  9 20:34 EVNT.48997924._000080.pool.root.1
[2026-03-09 22:27:06] -rw-r--r--. 2 boinc boinc     15845 Mar  9 20:34 start_atlas.sh
[2026-03-09 22:27:06] drwxrwx--x. 2 boinc boinc      4096 Mar  9 20:34 shared
[2026-03-09 22:27:06] -rw-r--r--. 2 boinc boinc    597954 Mar  9 20:34 input.tar.gz
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc         0 Mar  9 20:34 boinc_lockfile
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc      2586 Mar  9 20:34 pandaJob.out
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc   1002746 Mar  9 20:34 agis_schedconf.cvmfs.json
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc   1511578 Mar  9 20:34 agis_ddmendpoints.agis.ALL.json
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc       444 Mar  9 20:34 workernode_map.json
[2026-03-09 22:27:06] drwx------. 5 boinc boinc      4096 Mar  9 20:34 pilot3
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc 268103470 Mar  9 22:25 HITS.48997926._001995.pool.root.1
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc       529 Mar  9 22:25 boinc_task_state.xml
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc      1031 Mar  9 22:26 memory_monitor_summary.json
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc    286815 Mar  9 22:26 log.48997926._001995.job.log.tgz.1
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc        95 Mar  9 22:26 pilot_heartbeat.json
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc      6344 Mar  9 22:26 heartbeat.json
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc      8192 Mar  9 22:26 boinc_mmap_file
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc        27 Mar  9 22:26 wrapper_checkpoint.txt
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc      4830 Mar  9 22:27 pilotlog.txt
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc    969227 Mar  9 22:27 log.48997926._001995.job.log.1
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc       357 Mar  9 22:27 output.list
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc       620 Mar  9 22:27 runtime_log
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc   1269760 Mar  9 22:27 result.tar.gz
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc      9221 Mar  9 22:27 runtime_log.err
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc       662 Mar  9 22:27 qTaLDmNRLJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBDYLDmQfjo8n.diag
[2026-03-09 22:27:06] -rw-r--r--. 1 boinc boinc     20868 Mar  9 22:27 stderr.txt
[2026-03-09 22:27:06] HITS file was successfully produced:
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc 268103470 Mar  9 22:25 shared/HITS.pool.root.1
[2026-03-09 22:27:06]  *** Contents of shared directory: ***
[2026-03-09 22:27:06] total 598196
[2026-03-09 22:27:06] -rw-r--r--. 2 boinc boinc 342554943 Mar  9 20:34 ATLAS.root_0
[2026-03-09 22:27:06] -rw-r--r--. 2 boinc boinc     15845 Mar  9 20:34 start_atlas.sh
[2026-03-09 22:27:06] -rw-r--r--. 2 boinc boinc    597954 Mar  9 20:34 input.tar.gz
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc 268103470 Mar  9 22:25 HITS.pool.root.1
[2026-03-09 22:27:06] -rw-------. 1 boinc boinc   1269760 Mar  9 22:27 result.tar.gz
22:27:07 (2528312): run_atlas exited; CPU time 26063.079204
22:27:07 (2528312): called boinc_finish(0)

</stderr_txt>
]]>

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