Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:45:02 (831132): wrapper (7.7.26015): starting
23:45:02 (831132): wrapper: running run_atlas (--nthreads 10)
[2026-03-07 23:45:02] Arguments: --nthreads 10
[2026-03-07 23:45:02] Threads: 10
[2026-03-07 23:45:02] Checking for CVMFS
[2026-03-07 23:45:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 23:45:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 23:45:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 23:45:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 23:45:04] 2.13.3.0 10276 104440 214236 157027 1 752 29352439 40960001 28371 16776704 0 752898804 99.743 511316377 44921 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-07 23:45:04] CVMFS is ok
[2026-03-07 23:45:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 23:45:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 23:45:04] Further information can be found at the LHC@home message board.
[2026-03-07 23:45:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 23:45:04] Checking for apptainer binary...
[2026-03-07 23:45:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 23:45:04] Running /usr/bin/apptainer --version
[2026-03-07 23:45:04] apptainer version 1.4.5-2.el9
[2026-03-07 23:45:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 23:45:04] c-208-36.aglt2.org
[2026-03-07 23:45:04] apptainer works
[2026-03-07 23:45:05] Set ATHENA_PROC_NUMBER=10
[2026-03-07 23:45:05] Set ATHENA_CORE_NUMBER=10
[2026-03-07 23:45:05] Starting ATLAS job with PandaID=7038512637
[2026-03-07 23:45:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 01:55:30]  *** The last 200 lines of the pilot log: ***
[2026-03-08 01:55:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-08 01:55:30]  is_altstaged=None
[2026-03-08 01:55:30]  is_tar=False
[2026-03-08 01:55:30]  lfn=log.48955010._001105.job.log.tgz.1
[2026-03-08 01:55:30]  mtime=0
[2026-03-08 01:55:30]  protocol_id=None
[2026-03-08 01:55:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 01:55:30]  replicas=None
[2026-03-08 01:55:30]  scope=mc23_13p6TeV
[2026-03-08 01:55:30]  status=None
[2026-03-08 01:55:30]  status_code=0
[2026-03-08 01:55:30]  storage_token=
[2026-03-08 01:55:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7038512637/log.48955010._001105.job.log.tgz.1
[2026-03-08 01:55:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/7a/log.48955010._001105.job.log.tgz.1
[2026-03-08 01:55:30]  workdir=None
[2026-03-08 01:55:30] ]
[2026-03-08 01:55:30] 2026-03-08 05:59:18,918 | INFO     | transferring file log.48955010._001105.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7038512637/log.48955010._001105.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-08 01:55:30] 2026-03-08 05:59:18,919 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7038512637/log.48955010._001105.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._001105.job
[2026-03-08 01:55:30] 2026-03-08 05:59:19,079 | INFO     | adding to output.list: log.48955010._001105.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/7a/log.48955010._001105.job.log.tg
[2026-03-08 01:55:30] 2026-03-08 05:59:19,079 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 01:55:30] 2026-03-08 05:59:19,079 | INFO     | summary of transferred files:
[2026-03-08 01:55:30] 2026-03-08 05:59:19,079 | INFO     |  -- lfn=log.48955010._001105.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 01:55:30] 2026-03-08 05:59:19,080 | INFO     | stage-out finished correctly
[2026-03-08 01:55:30] 2026-03-08 05:59:20,213 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 01:55:30] 2026-03-08 05:59:20,786 | INFO     | time since job start (4386s) is within the limit (349056.0s)
[2026-03-08 01:55:30] 2026-03-08 05:59:22,821 | INFO     | time since job start (4388s) is within the limit (349056.0s)
[2026-03-08 01:55:30] 2026-03-08 05:59:23,292 | INFO     | job 7038512637 has state=finished
[2026-03-08 01:55:30] 2026-03-08 05:59:23,293 | INFO     | preparing for final server update for job 7038512637 in state='finished'
[2026-03-08 01:55:30] 2026-03-08 05:59:23,293 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7038512637/jobReport.json
[2026-03-08 01:55:30] 2026-03-08 05:59:23,294 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-08 01:55:30] 2026-03-08 05:59:23,295 | INFO     | this job has now completed (state=finished)
[2026-03-08 01:55:30] 2026-03-08 05:59:23,295 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 01:55:30] 2026-03-08 05:59:23,295 | INFO     | log transfer has been attempted: DONE
[2026-03-08 01:55:30] 2026-03-08 05:59:23,295 | INFO     | job 7038512637 has finished - writing final server update
[2026-03-08 01:55:30] 2026-03-08 05:59:23,295 | INFO     | total number of processed events: 400 (read)
[2026-03-08 01:55:30] 2026-03-08 05:59:23,628 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038512637/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 01:55:30] 2026-03-08 05:59:23,628 | INFO     | extracted standard info from prmon json
[2026-03-08 01:55:30] 2026-03-08 05:59:23,628 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 01:55:30] 2026-03-08 05:59:23,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 01:55:30] 2026-03-08 05:59:23,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 01:55:30] 2026-03-08 05:59:23,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 01:55:30] 2026-03-08 05:59:23,629 | INFO     | fitting pss+swap vs Time
[2026-03-08 01:55:30] 2026-03-08 05:59:23,629 | INFO     | sum of square deviations: 81273535.859375
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | sum of deviations: -1815443373.703125
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | mean x: 1772947461.546875
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | mean y: 2595556.734375
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | intersect: 39605717125.82962
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | chi2: 0.007649571963210494
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | current memory leak: -22.34 B/s (using 64 data points, chi2=0.01)
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | ..............................
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | . Timing measurements:
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | . get job = 0 s
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | . initial setup = 20 s
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | . payload setup = 31 s
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | . stage-in = 0 s
[2026-03-08 01:55:30] 2026-03-08 05:59:23,630 | INFO     | . payload execution = 4335 s
[2026-03-08 01:55:30] 2026-03-08 05:59:23,631 | INFO     | . stage-out = 2 s
[2026-03-08 01:55:30] 2026-03-08 05:59:23,631 | INFO     | . log creation = 0 s
[2026-03-08 01:55:30] 2026-03-08 05:59:23,631 | INFO     | ..............................
[2026-03-08 01:55:30] 2026-03-08 05:59:23,794 | WARNING  | process 867935 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 01:55:30] 2026-03-08 05:59:23,794 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038512637/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 01:55:30] 2026-03-08 05:59:24,143 | INFO     | 
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | job summary report
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | --------------------------------------------------
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | PanDA job id: 7038512637
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | task id: 48955010
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | errors: (none)
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | pilot state: finished 
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | transexitcode: 0
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | exeerrorcode: 0
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | exeerrordiag: 
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | exitcode: 0
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | exitmsg: OK
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | cpuconsumptiontime: 21124 s
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | nevents: 400
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | neventsw: 0
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | pid: 867935
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | pgrp: 867935
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | corecount: 10
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | event service: False
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | sizes: {0: 2295313, 1: 2295774, 11: 2295774, 4371: 2321863, 4374: 2330861, 4375: 2330917, 4379: 2331239}
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | --------------------------------------------------
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | 
[2026-03-08 01:55:30] 2026-03-08 05:59:24,144 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | job 7038512637 has completed (purged errors)
[2026-03-08 01:55:30] 2026-03-08 05:59:24,397 | INFO     | overall cleanup function is called
[2026-03-08 01:55:30] 2026-03-08 05:59:25,475 | INFO     | --- collectZombieJob: --- 10, [867935]
[2026-03-08 01:55:30] 2026-03-08 05:59:25,476 | INFO     | zombie collector waiting for pid 867935
[2026-03-08 01:55:30] 2026-03-08 05:59:25,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 01:55:30] 2026-03-08 05:59:25,476 | INFO     | collected zombie processes
[2026-03-08 01:55:30] 2026-03-08 05:59:25,476 | INFO     | will attempt to kill all subprocesses of pid=867935
[2026-03-08 01:55:30] 2026-03-08 05:59:26,473 | INFO     | number of running child processes to parent process 867935: 1
[2026-03-08 01:55:30] 2026-03-08 05:59:26,473 | INFO     | maximum number of monitored processes: 6
[2026-03-08 01:55:30] 2026-03-08 05:59:26,473 | INFO     | aborting job monitoring since job object (job id=7038512637) has expired
[2026-03-08 01:55:30] 2026-03-08 05:59:27,921 | INFO     | process IDs to be killed: [867935] (in reverse order)
[2026-03-08 01:55:30] 2026-03-08 05:59:28,364 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 01:55:30] 2026-03-08 05:59:28,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 01:55:30] 2026-03-08 05:59:28,434 | INFO     | did not find any defunct processes belonging to 867935
[2026-03-08 01:55:30] 2026-03-08 05:59:28,594 | INFO     | did not find any defunct processes belonging to 867935
[2026-03-08 01:55:30] 2026-03-08 05:59:28,594 | INFO     | ready for new job
[2026-03-08 01:55:30] 2026-03-08 05:59:28,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 01:55:30] 2026-03-08 05:59:28,595 | INFO     | **************************************
[2026-03-08 01:55:30] 2026-03-08 05:59:28,595 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 01:55:30] 2026-03-08 05:59:28,595 | INFO     | **************************************
[2026-03-08 01:55:30] 2026-03-08 05:59:28,595 | INFO     | 
[2026-03-08 01:55:30] 2026-03-08 05:59:28,613 | INFO     | architecture information:
[2026-03-08 01:55:30] 2026-03-08 05:59:28,622 | INFO     | executing command: cat /etc/os-release
[2026-03-08 01:55:30] 2026-03-08 05:59:28,721 | INFO     | cat /etc/os-release:
[2026-03-08 01:55:30] NAME="CentOS Linux"
[2026-03-08 01:55:30] VERSION="7 (Core)"
[2026-03-08 01:55:30] ID="centos"
[2026-03-08 01:55:30] ID_LIKE="rhel fedora"
[2026-03-08 01:55:30] VERSION_ID="7"
[2026-03-08 01:55:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 01:55:30] ANSI_COLOR="0;31"
[2026-03-08 01:55:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 01:55:30] HOME_URL="https://www.centos.org/"
[2026-03-08 01:55:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 01:55:30] 
[2026-03-08 01:55:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 01:55:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 01:55:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 01:55:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 01:55:30] 
[2026-03-08 01:55:30] 2026-03-08 05:59:28,721 | INFO     | **************************************
[2026-03-08 01:55:30] 2026-03-08 05:59:29,225 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-08 01:55:30] 2026-03-08 05:59:29,323 | INFO     | sufficient remaining disk space (162132918272 B)
[2026-03-08 01:55:30] 2026-03-08 05:59:29,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 01:55:30] 2026-03-08 05:59:29,323 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 01:55:30] 2026-03-08 05:59:29,323 | INFO     | update_server=False
[2026-03-08 01:55:30] 2026-03-08 05:59:29,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 01:55:30] 2026-03-08 05:59:29,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 01:55:30] 2026-03-08 05:59:29,904 | INFO     | all data control threads have been joined
[2026-03-08 01:55:30] 2026-03-08 05:59:29,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 01:55:30] 2026-03-08 05:59:29,988 | INFO     | aborting loop
[2026-03-08 01:55:30] 2026-03-08 05:59:30,061 | INFO     | all job control threads have been joined
[2026-03-08 01:55:30] 2026-03-08 05:59:30,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 01:55:30] 2026-03-08 05:59:30,207 | INFO     | all payload control threads have been joined
[2026-03-08 01:55:30] 2026-03-08 05:59:30,338 | INFO     | [job] retrieve thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:30,339 | INFO     | [job] queue monitor thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:30,492 | INFO     | [payload] failed_post thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:30,616 | INFO     | [job] validate thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:30,692 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:30,847 | INFO     | [payload] validate_post thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:30,910 | INFO     | [data] control thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:30,992 | INFO     | [job] job monitor thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:31,035 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:31,068 | INFO     | [job] control thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:31,115 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 01:55:30] 2026-03-08 05:59:31,117 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:31,213 | INFO     | [payload] control thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:31,573 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:31,611 | INFO     | [data] copytool_in thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:32,121 | INFO     | [data] copytool_out thread has finished
[2026-03-08 01:55:30] 2026-03-08 05:59:35,141 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 01:55:30] 2026-03-08 06:00:02,919 | INFO     | PID=845849 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 01:55:30] 2026-03-08 06:00:02,919 | INFO     | .. there are 38 such processes running
[2026-03-08 01:55:30] 2026-03-08 06:00:02,920 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 01:55:30] 2026-03-08 06:00:02,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 01:55:30] 2026-03-08 06:00:02,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 01:55:30] 2026-03-08 06:00:21,439 | INFO     | [monitor] cgroup control has ended
[2026-03-08 01:55:30] 2026-03-08 06:00:22,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139955095197504)>', '<ExcThread(monitor, started 139954713777920)>']
[2026-03-08 01:55:30] 2026-03-08 06:00:23,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 01:55:30] 2026-03-08 06:00:23,078 | INFO     | [monitor] control thread has ended
[2026-03-08 01:55:30] 2026-03-08 06:00:27,472 | INFO     | all workflow threads have been joined
[2026-03-08 01:55:30] 2026-03-08 06:00:27,473 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 01:55:30] 2026-03-08 06:00:27,473 | INFO     | traces error code: 0
[2026-03-08 01:55:30] 2026-03-08 06:00:27,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 01:55:30] 2026-03-08 06:00:28,152 [wrapper] ==== pilot stdout END ====
[2026-03-08 01:55:30] 2026-03-08 06:00:28,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 01:55:30] 2026-03-08 06:00:28,225 [wrapper] pilotpid: 845849
[2026-03-08 01:55:30] 2026-03-08 06:00:28,256 [wrapper] Pilot exit status: 0
[2026-03-08 01:55:30] 2026-03-08 06:00:28,415 [wrapper] pandaids: 7038512637
[2026-03-08 01:55:30] 2026-03-08 06:00:28,730 [wrapper] cleanup supervisor_pilot 1524291 845850
[2026-03-08 01:55:30] 2026-03-08 06:00:28,764 [wrapper] Test setup, not cleaning
[2026-03-08 01:55:30] 2026-03-08 06:00:28,795 [wrapper] apfmon messages muted
[2026-03-08 01:55:30] 2026-03-08 06:00:28,840 [wrapper] ==== wrapper stdout END ====
[2026-03-08 01:55:30] 2026-03-08 06:00:28,906 [wrapper] ==== wrapper stderr END ====
[2026-03-08 01:55:30]  *** Error codes and diagnostics ***
[2026-03-08 01:55:30]     "exeErrorCode": 0,
[2026-03-08 01:55:30]     "exeErrorDiag": "",
[2026-03-08 01:55:30]     "pilotErrorCode": 0,
[2026-03-08 01:55:30]     "pilotErrorDiag": "",
[2026-03-08 01:55:30]  *** Listing of results directory ***
[2026-03-08 01:55:30] total 617704
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas    584627 Mar  4 08:58 pilot3.tar.gz
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas      5111 Mar  4 09:53 queuedata.json
[2026-03-08 01:55:30] -rwx------. 1 boincer umatlas     36322 Mar  4 09:53 runpilot2-wrapper.sh
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas       100 Mar  7 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 01:55:30] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  7 23:45 run_atlas
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas       105 Mar  7 23:45 job.xml
[2026-03-08 01:55:30] -rw-r--r--. 2 boincer umatlas 440565123 Mar  7 23:45 EVNT.46701403._001023.pool.root.1
[2026-03-08 01:55:30] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 23:45 start_atlas.sh
[2026-03-08 01:55:30] drwxrwx--x. 2 boincer umatlas      4096 Mar  7 23:45 shared
[2026-03-08 01:55:30] -rw-r--r--. 2 boincer umatlas    597942 Mar  7 23:45 input.tar.gz
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas         0 Mar  7 23:45 boinc_lockfile
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas      2559 Mar  7 23:45 pandaJob.out
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas        57 Mar  7 23:45 setup.sh.local
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas    999169 Mar  7 23:45 agis_schedconf.cvmfs.json
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas   1521291 Mar  7 23:45 agis_ddmendpoints.agis.ALL.json
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas       432 Mar  7 23:46 workernode_map.json
[2026-03-08 01:55:30] drwx------. 5 boincer umatlas      4096 Mar  7 23:46 pilot3
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas 186158970 Mar  8 00:57 HITS.48955010._001105.pool.root.1
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas       531 Mar  8 00:57 boinc_task_state.xml
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas      1050 Mar  8 00:59 memory_monitor_summary.json
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas    338943 Mar  8 00:59 log.48955010._001105.job.log.tgz.1
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas      6361 Mar  8 00:59 heartbeat.json
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas        95 Mar  8 01:00 pilot_heartbeat.json
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas      4820 Mar  8 01:00 pilotlog.txt
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas    591239 Mar  8 01:00 log.48955010._001105.job.log.1
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas       357 Mar  8 01:00 output.list
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas       620 Mar  8 01:00 runtime_log
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas    952320 Mar  8 01:00 result.tar.gz
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas      9343 Mar  8 01:00 runtime_log.err
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas       657 Mar  8 01:00 DHtMDmam2H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmthILDmGt4Twm.diag
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas      7184 Mar  8 01:45 init_data.xml
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas        27 Mar  8 01:55 wrapper_checkpoint.txt
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 01:55 boinc_mmap_file
[2026-03-08 01:55:30] -rw-r--r--. 1 boincer umatlas     21489 Mar  8 01:55 stderr.txt
[2026-03-08 01:55:30] HITS file was successfully produced:
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas 186158970 Mar  8 00:57 shared/HITS.pool.root.1
[2026-03-08 01:55:30]  *** Contents of shared directory: ***
[2026-03-08 01:55:30] total 613576
[2026-03-08 01:55:30] -rw-r--r--. 2 boincer umatlas 440565123 Mar  7 23:45 ATLAS.root_0
[2026-03-08 01:55:30] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 23:45 start_atlas.sh
[2026-03-08 01:55:30] -rw-r--r--. 2 boincer umatlas    597942 Mar  7 23:45 input.tar.gz
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas 186158970 Mar  8 00:57 HITS.pool.root.1
[2026-03-08 01:55:30] -rw-------. 1 boincer umatlas    952320 Mar  8 01:00 result.tar.gz
01:55:32 (831132): run_atlas exited; CPU time 21258.656739
01:55:32 (831132): called boinc_finish(0)

</stderr_txt>
]]>

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