Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:13:53 (793501): wrapper (7.7.26015): starting
12:13:53 (793501): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 12:13:53] Arguments: --nthreads 4
[2026-03-09 12:13:53] Threads: 4
[2026-03-09 12:13:53] Checking for CVMFS
[2026-03-09 12:13:53] No cvmfs_config command found, will try listing directly
[2026-03-09 12:13:53] CVMFS is ok
[2026-03-09 12:13:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 12:13:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 12:13:53] Further information can be found at the LHC@home message board.
[2026-03-09 12:13:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 12:13:53] Checking for apptainer binary...
[2026-03-09 12:13:53] which: no apptainer in ((null))
[2026-03-09 12:13:53] apptainer is not installed, using version from CVMFS
[2026-03-09 12:13:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 12:13:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-09 12:13:53] apptainer works
[2026-03-09 12:13:53] Set ATHENA_PROC_NUMBER=4
[2026-03-09 12:13:53] Set ATHENA_CORE_NUMBER=4
[2026-03-09 12:13:53] Starting ATLAS job with PandaID=7039450114
[2026-03-09 12:13:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 13:35:19]  *** The last 200 lines of the pilot log: ***
[2026-03-09 13:35:19]  domain=
[2026-03-09 13:35:19]  filesize=303683
[2026-03-09 13:35:19]  filetype=log
[2026-03-09 13:35:19]  guid=081d3986-39d8-4194-841b-e6f69e1be972
[2026-03-09 13:35:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 13:35:19]  is_altstaged=None
[2026-03-09 13:35:19]  is_tar=False
[2026-03-09 13:35:19]  lfn=log.48955006._022807.job.log.tgz.1
[2026-03-09 13:35:19]  mtime=0
[2026-03-09 13:35:19]  protocol_id=None
[2026-03-09 13:35:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 13:35:19]  replicas=None
[2026-03-09 13:35:19]  scope=mc23_13p6TeV
[2026-03-09 13:35:19]  status=None
[2026-03-09 13:35:19]  status_code=0
[2026-03-09 13:35:19]  storage_token=
[2026-03-09 13:35:19]  surl=/var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7039450114/log.48955006._022807.job.log.tgz.1
[2026-03-09 13:35:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/18/log.48955006._022807.job.log.tgz.1
[2026-03-09 13:35:19]  workdir=None
[2026-03-09 13:35:19] ]
[2026-03-09 13:35:19] 2026-03-09 12:34:22,358 | INFO     | transferring file log.48955006._022807.job.log.tgz.1 from /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7039450114/log.48955006._022807.job.log.tgz.1 to /var/lib/
[2026-03-09 13:35:19] 2026-03-09 12:34:22,358 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7039450114/log.48955006._022807.job.log.tgz.1 /var/lib/boinc/var/slot116/slots/1/
[2026-03-09 13:35:19] 2026-03-09 12:34:22,373 | INFO     | adding to output.list: log.48955006._022807.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/18/log.48955006._022807.job.log.tg
[2026-03-09 13:35:19] 2026-03-09 12:34:22,374 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 13:35:19] 2026-03-09 12:34:22,374 | INFO     | summary of transferred files:
[2026-03-09 13:35:19] 2026-03-09 12:34:22,374 | INFO     |  -- lfn=log.48955006._022807.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 13:35:19] 2026-03-09 12:34:22,374 | INFO     | stage-out finished correctly
[2026-03-09 13:35:19] 2026-03-09 12:34:22,419 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 13:35:19] 2026-03-09 12:34:22,983 | INFO     | time since job start (4816s) is within the limit (349056.0s)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,125 | INFO     | job 7039450114 has state=finished
[2026-03-09 13:35:19] 2026-03-09 12:34:23,126 | INFO     | preparing for final server update for job 7039450114 in state='finished'
[2026-03-09 13:35:19] 2026-03-09 12:34:23,126 | INFO     | reading metadata from: /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7039450114/jobReport.json
[2026-03-09 13:35:19] 2026-03-09 12:34:23,127 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot116/slots/1/workernode_map.json
[2026-03-09 13:35:19] 2026-03-09 12:34:23,127 | INFO     | this job has now completed (state=finished)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,127 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,127 | INFO     | log transfer has been attempted: DONE
[2026-03-09 13:35:19] 2026-03-09 12:34:23,127 | INFO     | job 7039450114 has finished - writing final server update
[2026-03-09 13:35:19] 2026-03-09 12:34:23,128 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3751646/.job.ad'
[2026-03-09 13:35:19] 2026-03-09 12:34:23,128 | INFO     | total number of processed events: 400 (read)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,145 | INFO     | using path: /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7039450114/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,146 | INFO     | extracted standard info from prmon json
[2026-03-09 13:35:19] 2026-03-09 12:34:23,146 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 13:35:19] 2026-03-09 12:34:23,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 13:35:19] 2026-03-09 12:34:23,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 13:35:19] 2026-03-09 12:34:23,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 13:35:19] 2026-03-09 12:34:23,147 | INFO     | fitting pss+swap vs Time
[2026-03-09 13:35:19] 2026-03-09 12:34:23,147 | INFO     | sum of square deviations: 115715658.0
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | sum of deviations: 268788295.5
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | mean x: 1773057336.5
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | mean y: 2317288.5416666665
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | intersect: -4116201048.0312886
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | chi2: 0.00010025895097129013
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | current memory leak: 2.32 B/s (using 72 data points, chi2=0.00)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | could have reported an average CPU frequency of 3573 MHz (6 samples)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | ..............................
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | . Timing measurements:
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | . get job = 0 s
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | . initial setup = 5 s
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | . payload setup = 4 s
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | . stage-in = 0 s
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | . payload execution = 4795 s
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | . stage-out = 0 s
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | . log creation = 0 s
[2026-03-09 13:35:19] 2026-03-09 12:34:23,148 | INFO     | ..............................
[2026-03-09 13:35:19] 2026-03-09 12:34:23,627 | INFO     | 
[2026-03-09 13:35:19] 2026-03-09 12:34:23,627 | INFO     | job summary report
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | --------------------------------------------------
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | PanDA job id: 7039450114
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | task id: 48955006
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | errors: (none)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | pilot state: finished 
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | transexitcode: 0
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | exeerrorcode: 0
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | exeerrordiag: 
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | exitcode: 0
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | exitmsg: OK
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | cpuconsumptiontime: 18358 s
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | nevents: 400
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | neventsw: 0
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | pid: 803863
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | pgrp: 803863
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | corecount: 4
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | event service: False
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | sizes: {0: 2280242, 11: 2280242, 4803: 2306527, 4805: 2315605, 4806: 2315743}
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | --------------------------------------------------
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | 
[2026-03-09 13:35:19] 2026-03-09 12:34:23,628 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/1
[2026-03-09 13:35:19] 2026-03-09 12:34:23,644 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,644 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,644 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,644 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | job 7039450114 has completed (purged errors)
[2026-03-09 13:35:19] 2026-03-09 12:34:23,645 | INFO     | overall cleanup function is called
[2026-03-09 13:35:19] 2026-03-09 12:34:24,652 | INFO     | --- collectZombieJob: --- 10, [803863]
[2026-03-09 13:35:19] 2026-03-09 12:34:24,652 | INFO     | zombie collector waiting for pid 803863
[2026-03-09 13:35:19] 2026-03-09 12:34:24,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 13:35:19] 2026-03-09 12:34:24,652 | INFO     | collected zombie processes
[2026-03-09 13:35:19] 2026-03-09 12:34:24,652 | INFO     | will attempt to kill all subprocesses of pid=803863
[2026-03-09 13:35:19] 2026-03-09 12:34:25,088 | INFO     | process IDs to be killed: [803863] (in reverse order)
[2026-03-09 13:35:19] 2026-03-09 12:34:25,311 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 13:35:19] 2026-03-09 12:34:25,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 13:35:19] 2026-03-09 12:34:25,340 | INFO     | did not find any defunct processes belonging to 803863
[2026-03-09 13:35:19] 2026-03-09 12:34:25,367 | INFO     | did not find any defunct processes belonging to 803863
[2026-03-09 13:35:19] 2026-03-09 12:34:25,367 | INFO     | ready for new job
[2026-03-09 13:35:19] 2026-03-09 12:34:25,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 13:35:19] 2026-03-09 12:34:25,369 | INFO     | **************************************
[2026-03-09 13:35:19] 2026-03-09 12:34:25,369 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 13:35:19] 2026-03-09 12:34:25,369 | INFO     | **************************************
[2026-03-09 13:35:19] 2026-03-09 12:34:25,369 | INFO     | 
[2026-03-09 13:35:19] 2026-03-09 12:34:25,375 | INFO     | architecture information:
[2026-03-09 13:35:19] 2026-03-09 12:34:25,376 | INFO     | executing command: cat /etc/os-release
[2026-03-09 13:35:19] 2026-03-09 12:34:25,389 | INFO     | cat /etc/os-release:
[2026-03-09 13:35:19] NAME="CentOS Linux"
[2026-03-09 13:35:19] VERSION="7 (Core)"
[2026-03-09 13:35:19] ID="centos"
[2026-03-09 13:35:19] ID_LIKE="rhel fedora"
[2026-03-09 13:35:19] VERSION_ID="7"
[2026-03-09 13:35:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 13:35:19] ANSI_COLOR="0;31"
[2026-03-09 13:35:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 13:35:19] HOME_URL="https://www.centos.org/"
[2026-03-09 13:35:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 13:35:19] 
[2026-03-09 13:35:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 13:35:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 13:35:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 13:35:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 13:35:19] 
[2026-03-09 13:35:19] 2026-03-09 12:34:25,390 | INFO     | **************************************
[2026-03-09 13:35:19] 2026-03-09 12:34:25,892 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/1
[2026-03-09 13:35:19] 2026-03-09 12:34:25,908 | INFO     | sufficient remaining disk space (20829962240 B)
[2026-03-09 13:35:19] 2026-03-09 12:34:25,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 13:35:19] 2026-03-09 12:34:25,908 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 13:35:19] 2026-03-09 12:34:25,908 | INFO     | update_server=False
[2026-03-09 13:35:19] 2026-03-09 12:34:25,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 13:35:19] 2026-03-09 12:34:25,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 13:35:19] 2026-03-09 12:34:25,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:35:19] 2026-03-09 12:34:25,909 | INFO     | aborting loop
[2026-03-09 13:35:19] 2026-03-09 12:34:26,146 | INFO     | all data control threads have been joined
[2026-03-09 13:35:19] 2026-03-09 12:34:26,419 | INFO     | job.realtimelogging is not enabled
[2026-03-09 13:35:19] 2026-03-09 12:34:26,649 | INFO     | all payload control threads have been joined
[2026-03-09 13:35:19] 2026-03-09 12:34:26,759 | INFO     | all job control threads have been joined
[2026-03-09 13:35:19] 2026-03-09 12:34:26,913 | INFO     | [job] retrieve thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:26,914 | INFO     | [job] job monitor thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:26,967 | INFO     | [payload] failed_post thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,151 | INFO     | [data] control thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,231 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,424 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,497 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,543 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,546 | INFO     | [job] validate thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,654 | INFO     | [payload] control thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,764 | INFO     | [job] control thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,834 | INFO     | [data] copytool_in thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,913 | INFO     | [data] copytool_out thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:27,958 | INFO     | [payload] validate_post thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:28,202 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:35:19] 2026-03-09 12:34:28,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 13:35:19] 2026-03-09 12:34:29,207 | INFO     | [job] queue monitor thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:32,478 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 13:35:19] 2026-03-09 12:34:56,685 | INFO     | PID=798010 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 13:35:19] 2026-03-09 12:34:56,685 | INFO     | .. there are 54 such processes running
[2026-03-09 13:35:19] 2026-03-09 12:34:56,685 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 13:35:19] 2026-03-09 12:34:56,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 13:35:19] 2026-03-09 12:34:56,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 13:35:19] 2026-03-09 12:35:13,822 | INFO     | [monitor] cgroup control has ended
[2026-03-09 13:35:19] 2026-03-09 12:35:14,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22551306921792)>', '<ExcThread(monitor, started 22551068948224)>']
[2026-03-09 13:35:19] 2026-03-09 12:35:14,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 13:35:19] 2026-03-09 12:35:14,773 | INFO     | [monitor] control thread has ended
[2026-03-09 13:35:19] 2026-03-09 12:35:19,224 | INFO     | all workflow threads have been joined
[2026-03-09 13:35:19] 2026-03-09 12:35:19,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 13:35:19] 2026-03-09 12:35:19,224 | INFO     | traces error code: 0
[2026-03-09 13:35:19] 2026-03-09 12:35:19,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 13:35:19] 2026-03-09 12:35:19,410 [wrapper] ==== pilot stdout END ====
[2026-03-09 13:35:19] 2026-03-09 12:35:19,412 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 13:35:19] 2026-03-09 12:35:19,414 [wrapper] pilotpid: 798010
[2026-03-09 13:35:19] 2026-03-09 12:35:19,415 [wrapper] Pilot exit status: 0
[2026-03-09 13:35:19] 2026-03-09 12:35:19,422 [wrapper] pandaids: 7039450114
[2026-03-09 13:35:19] 2026-03-09 12:35:19,545 [wrapper] cleanup supervisor_pilot 1585669 798011
[2026-03-09 13:35:19] 2026-03-09 12:35:19,548 [wrapper] Test setup, not cleaning
[2026-03-09 13:35:19] 2026-03-09 12:35:19,551 [wrapper] apfmon messages muted
[2026-03-09 13:35:19] 2026-03-09 12:35:19,553 [wrapper] ==== wrapper stdout END ====
[2026-03-09 13:35:19] 2026-03-09 12:35:19,557 [wrapper] ==== wrapper stderr END ====
[2026-03-09 13:35:19]  *** Error codes and diagnostics ***
[2026-03-09 13:35:19]     "exeErrorCode": 0,
[2026-03-09 13:35:19]     "exeErrorDiag": "",
[2026-03-09 13:35:19]     "pilotErrorCode": 0,
[2026-03-09 13:35:19]     "pilotErrorDiag": "",
[2026-03-09 13:35:19]  *** Listing of results directory ***
[2026-03-09 13:35:19] total 619552
[2026-03-09 13:35:19] -rwx------. 1 boinc boinc     36322 Mar  8 04:55 runpilot2-wrapper.sh
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc      5111 Mar  8 04:55 queuedata.json
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc    584627 Mar  8 04:55 pilot3.tar.gz
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc       100 Mar  9 12:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 13:35:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 12:13 run_atlas
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc       105 Mar  9 12:13 job.xml
[2026-03-09 13:35:19] -rw-r--r--. 2 boinc boinc 445189268 Mar  9 12:13 EVNT.46701403._000456.pool.root.1
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc      6709 Mar  9 12:13 init_data.xml
[2026-03-09 13:35:19] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:13 start_atlas.sh
[2026-03-09 13:35:19] drwxrwx--x. 2 boinc boinc      4096 Mar  9 12:13 shared
[2026-03-09 13:35:19] -rw-r--r--. 2 boinc boinc    597953 Mar  9 12:13 input.tar.gz
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc         0 Mar  9 12:13 boinc_lockfile
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc      2564 Mar  9 12:13 pandaJob.out
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc    990726 Mar  9 12:14 agis_schedconf.cvmfs.json
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc   1511578 Mar  9 12:14 agis_ddmendpoints.agis.ALL.json
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc       445 Mar  9 12:14 workernode_map.json
[2026-03-09 13:35:19] drwx------. 5 boinc boinc      4096 Mar  9 12:14 pilot3
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc 183293287 Mar  9 13:33 HITS.48955006._022807.pool.root.1
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc       531 Mar  9 13:34 boinc_task_state.xml
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc      1032 Mar  9 13:34 memory_monitor_summary.json
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc    303683 Mar  9 13:34 log.48955006._022807.job.log.tgz.1
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc      6354 Mar  9 13:34 heartbeat.json
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc        95 Mar  9 13:34 pilot_heartbeat.json
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc      8192 Mar  9 13:35 boinc_mmap_file
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc        27 Mar  9 13:35 wrapper_checkpoint.txt
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc      4901 Mar  9 13:35 pilotlog.txt
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc    705692 Mar  9 13:35 log.48955006._022807.job.log.1
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc       357 Mar  9 13:35 output.list
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc       620 Mar  9 13:35 runtime_log
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc   1024000 Mar  9 13:35 result.tar.gz
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc      9221 Mar  9 13:35 runtime_log.err
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc       661 Mar  9 13:35 oOHLDmDQKJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmG8XLDmz4aWTn.diag
[2026-03-09 13:35:19] -rw-r--r--. 1 boinc boinc     20937 Mar  9 13:35 stderr.txt
[2026-03-09 13:35:19] HITS file was successfully produced:
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc 183293287 Mar  9 13:33 shared/HITS.pool.root.1
[2026-03-09 13:35:19]  *** Contents of shared directory: ***
[2026-03-09 13:35:19] total 615364
[2026-03-09 13:35:19] -rw-r--r--. 2 boinc boinc 445189268 Mar  9 12:13 ATLAS.root_0
[2026-03-09 13:35:19] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:13 start_atlas.sh
[2026-03-09 13:35:19] -rw-r--r--. 2 boinc boinc    597953 Mar  9 12:13 input.tar.gz
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc 183293287 Mar  9 13:33 HITS.pool.root.1
[2026-03-09 13:35:19] -rw-------. 1 boinc boinc   1024000 Mar  9 13:35 result.tar.gz
13:35:20 (793501): run_atlas exited; CPU time 18570.102217
13:35:20 (793501): called boinc_finish(0)

</stderr_txt>
]]>

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