Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-11 04:58:13 (8112): vboxwrapper version 26210
2026-03-11 04:58:13 (8112): BOINC client version: 8.2.8
2026-03-11 04:58:14 (8112): Detected: VirtualBox VboxManage Interface (Version: 6.1.2)
2026-03-11 04:58:14 (8112): Successfully copied 'init_data.xml' to the shared directory.
2026-03-11 04:58:14 (8112): Create VM. (boinc_c2801744906715a7, slot#0)
2026-03-11 04:58:15 (8112): Setting Memory Size for VM. (4400MB)
2026-03-11 04:58:15 (8112): Setting CPU Count for VM. (4)
2026-03-11 04:58:16 (8112): Setting Chipset Options for VM.
2026-03-11 04:58:16 (8112): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-11 04:58:16 (8112): Setting Boot Options for VM.
2026-03-11 04:58:17 (8112): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-11 04:58:17 (8112): Enabling VM Network Access.
2026-03-11 04:58:17 (8112): Disabling USB Support for VM.
2026-03-11 04:58:18 (8112): Disabling COM Port Support for VM.
2026-03-11 04:58:18 (8112): Disabling LPT Port Support for VM.
2026-03-11 04:58:18 (8112): Disabling Audio Support for VM.
2026-03-11 04:58:19 (8112): Disabling Clipboard Support for VM.
2026-03-11 04:58:19 (8112): Disabling Drag and Drop Support for VM.
2026-03-11 04:58:20 (8112): Adding storage controller(s) to VM.
2026-03-11 04:58:20 (8112): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-11 04:58:21 (8112): Adding VirtualBox Guest Additions to VM.
2026-03-11 04:58:21 (8112): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-11 04:58:21 (8112): forwarding host port 55010 to guest port 80
2026-03-11 04:58:22 (8112): Enabling remote desktop for VM.
2026-03-11 04:58:22 (8112): Required extension pack not installed, remote desktop not enabled.
2026-03-11 04:58:22 (8112): Enabling shared directory for VM.
2026-03-11 04:58:23 (8112): Starting VM using VBoxManage interface. (boinc_c2801744906715a7, slot#0)
2026-03-11 04:58:27 (8112): Successfully started VM. (PID = '14688')
2026-03-11 04:58:27 (8112): Reporting VM Process ID to BOINC.
2026-03-11 04:58:27 (8112): Guest Log: BIOS: VirtualBox 6.1.2
2026-03-11 04:58:27 (8112): Guest Log: CPUID EDX: 0x178bfbff
2026-03-11 04:58:27 (8112): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-11 04:58:27 (8112): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-11 04:58:27 (8112): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-11 04:58:27 (8112): Detected: Web Application Enabled (http://localhost:55010)
2026-03-11 04:58:27 (8112): Preference change detected
2026-03-11 04:58:27 (8112): Setting CPU throttle for VM. (90%)
2026-03-11 04:58:27 (8112): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-11 04:58:29 (8112): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-11 04:58:29 (8112): Guest Log: BIOS: Booting from Hard Disk...
2026-03-11 04:58:32 (8112): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-11 04:58:32 (8112): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-11 04:58:32 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-11 04:58:40 (8112): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-11 04:58:40 (8112): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-11 04:58:51 (8112): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-11 04:58:51 (8112): Guest Log: 00:00:00.000124 main     Log opened 2026-03-11T04:58:48.955888000Z
2026-03-11 04:58:51 (8112): Guest Log: 00:00:00.000193 main     OS Product: Linux
2026-03-11 04:58:51 (8112): Guest Log: 00:00:00.000270 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-11 04:58:51 (8112): Guest Log: 00:00:00.000294 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-11 04:58:51 (8112): Guest Log: 00:00:00.000332 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-11 04:58:51 (8112): Guest Log: 00:00:00.000333 main     Process ID: 1304
2026-03-11 04:58:51 (8112): Guest Log: 00:00:00.000333 main     Package type: LINUX_64BITS_GENERIC
2026-03-11 04:58:51 (8112): Guest Log: 00:00:00.002549 main     5.2.32 r132073 started. Verbose level = 0
2026-03-11 04:58:51 (8112): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-11 04:58:51 (8112): Guest Log: [INFO] Mounting shared directory
2026-03-11 04:58:51 (8112): Guest Log: [INFO] Checking for init_data.xml
2026-03-11 04:59:01 (8112): Guest Log: 00:00:10.006584 timesync vgsvcTimeSyncWorker: Radical guest time change: -37 788 377 033 000ns (GuestNow=1 773 167 340 583 938 000 ns GuestLast=1 773 205 128 960 971 000 ns fSetTimeLastLoop=true )
2026-03-11 04:59:05 (8112): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-11 04:59:05 (8112): Guest Log: [INFO] Detected branch: prod
2026-03-11 04:59:05 (8112): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-11 04:59:05 (8112): Guest Log: Copying input files
2026-03-11 04:59:11 (8112): Guest Log: Copied input files into RunAtlas.
2026-03-11 04:59:11 (8112): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-11 04:59:11 (8112): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-11 04:59:11 (8112): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-11 04:59:11 (8112): Guest Log: Further information can be found at the LHC@home message board.
2026-03-11 05:00:24 (8112): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-11 05:00:25 (8112): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-11 05:00:25 (8112): Guest Log: 2.6.3.0 1592 1 32168 157126 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-11 05:00:28 (8112): Guest Log: copied the webapp to /var/www
2026-03-11 05:00:28 (8112): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-11 05:00:28 (8112): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-11 05:00:29 (8112): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-11 05:00:29 (8112): Guest Log:  *** Starting ATLAS job. (PandaID=7039533337 taskID=48955006) ***
2026-03-11 05:58:38 (8112): VM state change detected. (old = 'running', new = 'paused')
2026-03-11 15:17:34 (8112): Preference change detected
2026-03-11 15:17:34 (8112): Setting CPU throttle for VM. (90%)
2026-03-11 15:17:35 (8112): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-11 15:17:35 (8112): VM state change detected. (old = 'paused', new = 'running')
2026-03-11 15:17:40 (8112): Guest Log: 00:59:52.172301 timesync vgsvcTimeSyncWorker: Radical host time change: 33 546 806 000 000ns (HostNow=1 773 204 459 545 000 000 ns HostLast=1 773 170 912 739 000 000 ns)
2026-03-11 15:17:50 (8112): Guest Log: 01:00:02.172642 timesync vgsvcTimeSyncWorker: Radical guest time change: 33 546 795 993 000ns (GuestNow=1 773 204 469 545 402 000 ns GuestLast=1 773 170 922 749 409 000 ns fSetTimeLastLoop=true )
2026-03-11 15:57:29 (8112): Status Report: Elapsed Time: '6000.263891'
2026-03-11 15:57:29 (8112): Status Report: CPU Time: '17674.031250'
2026-03-11 17:37:32 (8112): Status Report: Elapsed Time: '12000.263891'
2026-03-11 17:37:32 (8112): Status Report: CPU Time: '34603.140625'
2026-03-11 18:06:54 (8112): Guest Log:  *** Job finished ***
2026-03-11 18:06:54 (8112): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:09,790 | INFO     | traces error code: 0
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:09,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,359 | INFO     | PID=6024 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,359 | INFO     | found 0 job(s) in 20 queues
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,360 | INFO     | [monitor] control thread has ended
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,509 [wrapper] ==== pilot stdout END ====
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,514 [wrapper] ==== wrapper stdout RESUME ====
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,518 [wrapper] pilotpid: 6024
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:33:17,522 [wrapper] Pilot exit status: 0
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:36:24,370 [wrapper] supervise_pilot (15 min periods counter: 16)
2026-03-11 18:06:54 (8112): Guest Log: ./runpilot2-wrapper.sh: line 1019: /usr/bin/xargs: Input/output error
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:36:52,289 [wrapper] pandaids: 
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:36:52,326 [wrapper] cleanup supervisor_pilot 28071 6025
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:36:52,331 [wrapper] Test setup, not cleaning
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:36:52,336 [wrapper] apfmon messages muted
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:36:52,340 [wrapper] ==== wrapper stdout END ====
2026-03-11 18:06:54 (8112): Guest Log: 2026-03-11 07:36:52,345 [wrapper] ==== wrapper stderr END ====
2026-03-11 18:06:54 (8112): Guest Log:  *** Error codes and diagnostics ***
2026-03-11 18:06:54 (8112): Guest Log:     "exeErrorCode": 68,
2026-03-11 18:06:54 (8112): Guest Log:     "exeErrorDiag": "Fatal error in athena logfile: \"Logfile error in log.EVNTtoHITS: \"AthenaPoolCnvSvc                                                 FATAL AthenaPoolCnvSvc::::ExcNoDictForClass: Can't find dictionary information for class: EventStreamInfo_p1\"\"",
2026-03-11 18:06:54 (8112): Guest Log:     "pilotErrorCode": 1305,
2026-03-11 18:06:54 (8112): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformLogfileErrorException: Fatal error in athena logfile: \"Logfile error in log.EVNTtoHITS: \"AthenaPoolCnvSvc                                                 FATAL AthenaPoolCnvSvc:",
2026-03-11 18:06:54 (8112): Guest Log:  *** Listing of results directory ***
2026-03-11 18:06:54 (8112): Guest Log: total 6656
2026-03-11 18:06:54 (8112): Guest Log: -rw-r--r--. 1 atlas atlas  584627 Mar  8 03:52 pilot3.tar.gz
2026-03-11 18:06:54 (8112): Guest Log: -rwx------. 1 atlas atlas   36322 Mar  8 03:53 runpilot2-wrapper.sh
2026-03-11 18:06:54 (8112): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Mar  8 03:53 queuedata.json
2026-03-11 18:06:54 (8112): Guest Log: -rwxr-xr-x. 1 atlas atlas    5898 Mar 10 18:29 init_data.xml
2026-03-11 18:06:54 (8112): Guest Log: -rwxr-xr-x. 1 atlas atlas  597954 Mar 10 18:29 input.tar.gz
2026-03-11 18:06:54 (8112): Guest Log: -rwxr-xr-x. 1 atlas atlas   15845 Mar 10 18:29 start_atlas.sh
2026-03-11 18:06:54 (8112): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 10 18:29 EVNT.46701403._000468.pool.root.1 -> /data/./ATLAS.root_0
2026-03-11 18:06:54 (8112): Guest Log: -rw-r--r--. 1 atlas atlas    2563 Mar 10 18:30 pandaJob.out
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas 1006644 Mar 10 18:33 agis_schedconf.cvmfs.json
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas     425 Mar 10 18:33 workernode_map.json
2026-03-11 18:06:54 (8112): Guest Log: drwx------. 5 atlas atlas    4096 Mar 10 18:33 pilot3
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas    1031 Mar 11 07:16 memory_monitor_summary.json
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas  374436 Mar 11 07:20 log.48955006._023379.job.log.tgz.1
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas       0 Mar 11 07:25 agis_ddmendpoints.agis.ALL.json
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas    8860 Mar 11 07:32 heartbeat.json
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas     744 Mar 11 07:33 pilotlog.txt
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas      98 Mar 11 07:33 pilot_heartbeat.json
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas 1861965 Mar 11 07:36 log.48955006._023379.job.log.1
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas     188 Mar 11 07:36 output.list
2026-03-11 18:06:54 (8112): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar 11 07:36 runtime_log
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas 2252800 Mar 11 07:36 result.tar.gz
2026-03-11 18:06:54 (8112): Guest Log: -rw-r--r--. 1 atlas atlas    8627 Mar 11 07:36 runtime_log.err
2026-03-11 18:06:54 (8112): Guest Log: -rw-------. 1 atlas atlas     666 Mar 11 07:36 8JJMDmbNKJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm65XLDmUtTHim.diag
2026-03-11 18:06:54 (8112): Guest Log: Looking for outputfile HITS.48955006._023379.pool.root.1
2026-03-11 18:06:54 (8112): Guest Log: No HITS file was produced
2026-03-11 18:06:54 (8112): Guest Log: Successfully finished the ATLAS job!
2026-03-11 18:06:54 (8112): Guest Log: Copying the results back to the shared directory!
2026-03-11 18:06:54 (8112): Guest Log:  *** Contents of shared directory: ***
2026-03-11 18:06:54 (8112): Guest Log: total 430912
2026-03-11 18:06:54 (8112): Guest Log: -rwxrwxrwx. 1 root root 438378151 Mar 10 18:28 ATLAS.root_0
2026-03-11 18:06:54 (8112): Guest Log: -rwxrwxrwx. 1 root root      5898 Mar 10 18:28 init_data.xml
2026-03-11 18:06:54 (8112): Guest Log: -rwxrwxrwx. 1 root root    597954 Mar  8 08:31 input.tar.gz
2026-03-11 18:06:54 (8112): Guest Log: -rwxrwxrwx. 1 root root   2252800 Mar 11 07:36 result.tar.gz
2026-03-11 18:06:54 (8112): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  8 08:31 start_atlas.sh
2026-03-11 18:06:54 (8112): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-11 18:06:54 (8112): VM Completion File Detected.
2026-03-11 18:06:54 (8112): Powering off VM.
2026-03-11 18:06:55 (8112): Successfully stopped VM.
2026-03-11 18:06:55 (8112): Deregistering VM. (boinc_c2801744906715a7, slot#0)
2026-03-11 18:06:55 (8112): Removing network bandwidth throttle group from VM.
2026-03-11 18:06:55 (8112): Removing VM from VirtualBox.
2026-03-11 18:07:00 (8112): called boinc_finish(0)

</stderr_txt>
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