Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-08 22:36:48 (37116): vboxwrapper version 26210
2026-03-08 22:36:48 (37116): BOINC client version: 8.2.8
2026-03-08 22:36:49 (37116): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-08 22:36:49 (37116): Successfully copied 'init_data.xml' to the shared directory.
2026-03-08 22:36:49 (37116): Create VM. (boinc_5dc2a8a681b7c355, slot#3)
2026-03-08 22:36:50 (37116): Setting Memory Size for VM. (4800MB)
2026-03-08 22:36:50 (37116): Setting CPU Count for VM. (8)
2026-03-08 22:36:51 (37116): Setting Chipset Options for VM.
2026-03-08 22:36:51 (37116): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-08 22:36:51 (37116): Setting Boot Options for VM.
2026-03-08 22:36:52 (37116): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-08 22:36:52 (37116): Enabling VM Network Access.
2026-03-08 22:36:52 (37116): Disabling USB Support for VM.
2026-03-08 22:36:52 (37116): Disabling COM Port Support for VM.
2026-03-08 22:36:53 (37116): Disabling LPT Port Support for VM.
2026-03-08 22:36:53 (37116): Disabling Audio Support for VM.
2026-03-08 22:36:53 (37116): Disabling Clipboard Support for VM.
2026-03-08 22:36:53 (37116): Disabling Drag and Drop Support for VM.
2026-03-08 22:36:54 (37116): Adding storage controller(s) to VM.
2026-03-08 22:36:54 (37116): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-08 22:36:54 (37116): Adding VirtualBox Guest Additions to VM.
2026-03-08 22:36:55 (37116): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-08 22:36:55 (37116): forwarding host port 43571 to guest port 80
2026-03-08 22:36:55 (37116): Enabling remote desktop for VM.
2026-03-08 22:36:55 (37116): Required extension pack not installed, remote desktop not enabled.
2026-03-08 22:36:55 (37116): Enabling shared directory for VM.
2026-03-08 22:36:56 (37116): Starting VM using VBoxManage interface. (boinc_5dc2a8a681b7c355, slot#3)
2026-03-08 22:37:02 (37116): Successfully started VM. (PID = '86964')
2026-03-08 22:37:02 (37116): Reporting VM Process ID to BOINC.
2026-03-08 22:37:02 (37116): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-08 22:37:02 (37116): Guest Log: CPUID EDX: 0x178bfbff
2026-03-08 22:37:02 (37116): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-08 22:37:02 (37116): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-08 22:37:02 (37116): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-08 22:37:02 (37116): Detected: Web Application Enabled (http://localhost:43571)
2026-03-08 22:37:02 (37116): Preference change detected
2026-03-08 22:37:02 (37116): Setting CPU throttle for VM. (50%)
2026-03-08 22:37:02 (37116): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-08 22:37:04 (37116): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-08 22:37:04 (37116): Guest Log: BIOS: Booting from Hard Disk...
2026-03-08 22:37:07 (37116): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-08 22:37:07 (37116): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-08 22:37:07 (37116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-08 22:37:19 (37116): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-08 22:37:19 (37116): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-08 22:37:29 (37116): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-08 22:37:29 (37116): Guest Log: 00:00:00.000157 main     Log opened 2026-03-08T22:37:27.288722000Z
2026-03-08 22:37:29 (37116): Guest Log: 00:00:00.000296 main     OS Product: Linux
2026-03-08 22:37:29 (37116): Guest Log: 00:00:00.000328 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-08 22:37:29 (37116): Guest Log: 00:00:00.000354 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-08 22:37:29 (37116): Guest Log: 00:00:00.000379 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-08 22:37:29 (37116): Guest Log: 00:00:00.000380 main     Process ID: 1374
2026-03-08 22:37:29 (37116): Guest Log: 00:00:00.000380 main     Package type: LINUX_64BITS_GENERIC
2026-03-08 22:37:29 (37116): Guest Log: 00:00:00.001147 main     5.2.32 r132073 started. Verbose level = 0
2026-03-08 22:37:29 (37116): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-08 22:37:29 (37116): Guest Log: [INFO] Mounting shared directory
2026-03-08 22:37:29 (37116): Guest Log: [INFO] Checking for init_data.xml
2026-03-08 22:37:39 (37116): Guest Log: 00:00:10.003731 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 566 665 000ns (GuestNow=1 773 005 858 724 289 000 ns GuestLast=1 773 009 447 290 954 000 ns fSetTimeLastLoop=true )
2026-03-08 22:38:23 (37116): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-08 22:38:23 (37116): Guest Log: [INFO] Detected branch: prod
2026-03-08 22:38:23 (37116): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-08 22:38:23 (37116): Guest Log: Copying input files
2026-03-08 22:38:32 (37116): Guest Log: Copied input files into RunAtlas.
2026-03-08 22:38:32 (37116): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-08 22:38:32 (37116): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-08 22:38:32 (37116): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-08 22:38:32 (37116): Guest Log: Further information can be found at the LHC@home message board.
2026-03-08 22:39:34 (37116): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-08 22:39:34 (37116): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-08 22:39:34 (37116): Guest Log: 2.6.3.0 1675 1 32028 157053 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-08 22:39:35 (37116): Guest Log: copied the webapp to /var/www
2026-03-08 22:39:35 (37116): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-08 22:39:35 (37116): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-08 22:39:36 (37116): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-08 22:39:36 (37116): Guest Log:  *** Starting ATLAS job. (PandaID=7039492574 taskID=48955006) ***
2026-03-08 23:45:37 (37116): VM state change detected. (old = 'running', new = 'paused')
2026-03-08 23:45:58 (37116): VM state change detected. (old = 'paused', new = 'running')
2026-03-09 00:17:30 (37116): Status Report: Elapsed Time: '6000.000000'
2026-03-09 00:17:30 (37116): Status Report: CPU Time: '25924.187500'
2026-03-09 00:22:31 (37116): Guest Log:  *** Job finished ***
2026-03-09 00:22:31 (37116): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:21:54,704 | INFO     | end of generic workflow (traces error code: 0)
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:21:54,704 | INFO     | traces error code: 0
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:21:54,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:07,454 | INFO     | 6069s have passed since pilot start - server update state is 'UPDATING_FINAL'
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,513 | INFO     | PID=6114 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,513 | INFO     | found 0 job(s) in 20 queues
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,513 | INFO     | [monitor] control thread has ended
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,591 [wrapper] ==== pilot stdout END ====
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,605 [wrapper] ==== wrapper stdout RESUME ====
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,622 [wrapper] pilotpid: 6114
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,631 [wrapper] Pilot exit status: 0
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,837 [wrapper] pandaids: 7039492574
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,914 [wrapper] cleanup supervisor_pilot 25691 6115
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,924 [wrapper] Test setup, not cleaning
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,934 [wrapper] apfmon messages muted
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,946 [wrapper] ==== wrapper stdout END ====
2026-03-09 00:22:31 (37116): Guest Log: 2026-03-08 23:22:08,962 [wrapper] ==== wrapper stderr END ====
2026-03-09 00:22:31 (37116): Guest Log:  *** Error codes and diagnostics ***
2026-03-09 00:22:31 (37116): Guest Log:     "exeErrorCode": 0,
2026-03-09 00:22:31 (37116): Guest Log:     "exeErrorDiag": "",
2026-03-09 00:22:31 (37116): Guest Log:     "pilotErrorCode": 0,
2026-03-09 00:22:31 (37116): Guest Log:     "pilotErrorDiag": "",
2026-03-09 00:22:31 (37116): Guest Log:  *** Listing of results directory ***
2026-03-09 00:22:31 (37116): Guest Log: total 197340
2026-03-09 00:22:31 (37116): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  8 03:52 pilot3.tar.gz
2026-03-09 00:22:31 (37116): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  8 03:53 runpilot2-wrapper.sh
2026-03-09 00:22:31 (37116): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  8 03:53 queuedata.json
2026-03-09 00:22:31 (37116): Guest Log: -rwxr-xr-x. 1 atlas atlas      8747 Mar  8 21:38 init_data.xml
2026-03-09 00:22:31 (37116): Guest Log: -rwxr-xr-x. 1 atlas atlas    597952 Mar  8 21:38 input.tar.gz
2026-03-09 00:22:31 (37116): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  8 21:38 start_atlas.sh
2026-03-09 00:22:31 (37116): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  8 21:38 EVNT.46701403._000467.pool.root.1 -> /data/./ATLAS.root_0
2026-03-09 00:22:31 (37116): Guest Log: -rw-r--r--. 1 atlas atlas      2564 Mar  8 21:39 pandaJob.out
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas    999108 Mar  8 21:40 agis_schedconf.cvmfs.json
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar  8 21:40 agis_ddmendpoints.agis.ALL.json
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas       434 Mar  8 21:40 workernode_map.json
2026-03-09 00:22:31 (37116): Guest Log: drwx------. 5 atlas atlas      4096 Mar  8 21:40 pilot3
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas 195784351 Mar  8 23:21 HITS.48955006._023351.pool.root.1
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas      1028 Mar  8 23:21 memory_monitor_summary.json
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas    373596 Mar  8 23:21 log.48955006._023351.job.log.tgz.1
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas        95 Mar  8 23:21 pilot_heartbeat.json
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas      6376 Mar  8 23:21 heartbeat.json
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas       859 Mar  8 23:22 pilotlog.txt
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas    843016 Mar  8 23:22 log.48955006._023351.job.log.1
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas       357 Mar  8 23:22 output.list
2026-03-09 00:22:31 (37116): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  8 23:22 runtime_log
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas   1239040 Mar  8 23:22 result.tar.gz
2026-03-09 00:22:31 (37116): Guest Log: -rw-r--r--. 1 atlas atlas      8766 Mar  8 23:22 runtime_log.err
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas       659 Mar  8 23:22 cklLDmbNKJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmi5XLDmPAPhom.diag
2026-03-09 00:22:31 (37116): Guest Log: Looking for outputfile HITS.48955006._023351.pool.root.1
2026-03-09 00:22:31 (37116): Guest Log: HITS file was successfully produced
2026-03-09 00:22:31 (37116): Guest Log: -rw-------. 1 atlas atlas 195784351 Mar  8 23:21 /home/atlas/RunAtlas/HITS.48955006._023351.pool.root.1
2026-03-09 00:22:33 (37116): Guest Log: Successfully finished the ATLAS job!
2026-03-09 00:22:33 (37116): Guest Log: Copying the results back to the shared directory!
2026-03-09 00:22:33 (37116): Guest Log:  *** Contents of shared directory: ***
2026-03-09 00:22:33 (37116): Guest Log: total 623228
2026-03-09 00:22:33 (37116): Guest Log: -rwxrwxrwx. 1 root root 440532173 Mar  8 21:36 ATLAS.root_0
2026-03-09 00:22:33 (37116): Guest Log: -rwxrwxrwx. 1 root root 195784351 Mar  8  2026 HITS.pool.root.1
2026-03-09 00:22:33 (37116): Guest Log: -rwxrwxrwx. 1 root root      8747 Mar  8 21:36 init_data.xml
2026-03-09 00:22:33 (37116): Guest Log: -rwxrwxrwx. 1 root root    597952 Mar  8 08:28 input.tar.gz
2026-03-09 00:22:33 (37116): Guest Log: -rwxrwxrwx. 1 root root   1239040 Mar  8  2026 result.tar.gz
2026-03-09 00:22:33 (37116): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  8 08:28 start_atlas.sh
2026-03-09 00:22:33 (37116): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-09 00:22:33 (37116): VM Completion File Detected.
2026-03-09 00:22:33 (37116): Powering off VM.
2026-03-09 00:22:33 (37116): Successfully stopped VM.
2026-03-09 00:22:33 (37116): Deregistering VM. (boinc_5dc2a8a681b7c355, slot#3)
2026-03-09 00:22:33 (37116): Removing network bandwidth throttle group from VM.
2026-03-09 00:22:34 (37116): Removing VM from VirtualBox.
2026-03-09 00:22:39 (37116): called boinc_finish(0)

</stderr_txt>
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