Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-09 07:28:15 (7868): vboxwrapper version 26210
2026-03-09 07:28:15 (7868): BOINC client version: 8.2.4
2026-03-09 07:28:16 (7868): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2026-03-09 07:28:17 (7868): Successfully copied 'init_data.xml' to the shared directory.
2026-03-09 07:28:17 (7868): Create VM. (boinc_2c3fec828276affc, slot#1)
2026-03-09 07:28:17 (7868): Setting Memory Size for VM. (4400MB)
2026-03-09 07:28:18 (7868): Setting CPU Count for VM. (4)
2026-03-09 07:28:18 (7868): Setting Chipset Options for VM.
2026-03-09 07:28:18 (7868): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-09 07:28:19 (7868): Setting Boot Options for VM.
2026-03-09 07:28:19 (7868): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-09 07:28:19 (7868): Enabling VM Network Access.
2026-03-09 07:28:20 (7868): Disabling USB Support for VM.
2026-03-09 07:28:20 (7868): Disabling COM Port Support for VM.
2026-03-09 07:28:20 (7868): Disabling LPT Port Support for VM.
2026-03-09 07:28:21 (7868): Disabling Audio Support for VM.
2026-03-09 07:28:21 (7868): Disabling Clipboard Support for VM.
2026-03-09 07:28:21 (7868): Disabling Drag and Drop Support for VM.
2026-03-09 07:28:21 (7868): Adding storage controller(s) to VM.
2026-03-09 07:28:22 (7868): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-09 07:28:24 (7868): Adding VirtualBox Guest Additions to VM.
2026-03-09 07:28:24 (7868): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-09 07:28:24 (7868): forwarding host port 65320 to guest port 80
2026-03-09 07:28:25 (7868): Enabling remote desktop for VM.
2026-03-09 07:28:25 (7868): Required extension pack not installed, remote desktop not enabled.
2026-03-09 07:28:25 (7868): Enabling shared directory for VM.
2026-03-09 07:28:26 (7868): Starting VM using VBoxManage interface. (boinc_2c3fec828276affc, slot#1)
2026-03-09 07:28:36 (7868): Successfully started VM. (PID = '4312')
2026-03-09 07:28:36 (7868): Reporting VM Process ID to BOINC.
2026-03-09 07:28:36 (7868): Guest Log: BIOS: VirtualBox 7.0.18
2026-03-09 07:28:36 (7868): Guest Log: CPUID EDX: 0x178bfbff
2026-03-09 07:28:36 (7868): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-09 07:28:36 (7868): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-09 07:28:36 (7868): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-09 07:28:36 (7868): Detected: Web Application Enabled (http://localhost:65320)
2026-03-09 07:28:36 (7868): Preference change detected
2026-03-09 07:28:36 (7868): Setting CPU throttle for VM. (100%)
2026-03-09 07:28:37 (7868): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-09 07:28:39 (7868): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-09 07:28:39 (7868): Guest Log: BIOS: Booting from Hard Disk...
2026-03-09 07:28:42 (7868): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-09 07:28:42 (7868): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-09 07:28:42 (7868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-09 07:28:52 (7868): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-09 07:28:52 (7868): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-09 07:29:08 (7868): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-09 07:29:08 (7868): Guest Log: 00:00:00.000415 main     Log opened 2026-03-09T07:29:05.633329000Z
2026-03-09 07:29:08 (7868): Guest Log: 00:00:00.000770 main     OS Product: Linux
2026-03-09 07:29:08 (7868): Guest Log: 00:00:00.000881 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-09 07:29:08 (7868): Guest Log: 00:00:00.001002 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-09 07:29:08 (7868): Guest Log: 00:00:00.001094 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-09 07:29:08 (7868): Guest Log: 00:00:00.001163 main     Process ID: 1322
2026-03-09 07:29:08 (7868): Guest Log: 00:00:00.001166 main     Package type: LINUX_64BITS_GENERIC
2026-03-09 07:29:08 (7868): Guest Log: 00:00:00.004069 main     5.2.32 r132073 started. Verbose level = 0
2026-03-09 07:29:09 (7868): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-09 07:29:09 (7868): Guest Log: [INFO] Mounting shared directory
2026-03-09 07:29:09 (7868): Guest Log: [INFO] Checking for init_data.xml
2026-03-09 07:29:17 (7868): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-09 07:29:17 (7868): Guest Log: [INFO] Detected branch: prod
2026-03-09 07:29:17 (7868): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-09 07:29:17 (7868): Guest Log: Copying input files
2026-03-09 07:29:18 (7868): Guest Log: 00:00:10.008565 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 368 365 000ns (GuestNow=1 773 055 758 009 386 000 ns GuestLast=1 773 041 345 641 021 000 ns fSetTimeLastLoop=true )
2026-03-09 07:29:24 (7868): Guest Log: Copied input files into RunAtlas.
2026-03-09 07:29:24 (7868): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-09 07:29:24 (7868): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-09 07:29:24 (7868): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-09 07:29:24 (7868): Guest Log: Further information can be found at the LHC@home message board.
2026-03-09 07:30:24 (7868): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-09 07:30:25 (7868): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-09 07:30:25 (7868): Guest Log: 2.6.3.0 1604 1 32172 157075 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-09 07:30:26 (7868): Guest Log: copied the webapp to /var/www
2026-03-09 07:30:26 (7868): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-09 07:30:26 (7868): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-09 07:30:27 (7868): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-09 07:30:27 (7868): Guest Log:  *** Starting ATLAS job. (PandaID=7039300864 taskID=48955010) ***
2026-03-09 09:16:19 (7868): Status Report: Elapsed Time: '6000.940639'
2026-03-09 09:16:19 (7868): Status Report: CPU Time: '21308.328125'
2026-03-09 11:07:17 (7868): Status Report: Elapsed Time: '12001.876835'
2026-03-09 11:07:17 (7868): Status Report: CPU Time: '47374.078125'
2026-03-09 12:55:47 (7868): Status Report: Elapsed Time: '18002.755934'
2026-03-09 12:55:52 (7868): Status Report: CPU Time: '72935.921875'
2026-03-09 14:42:50 (7868): Status Report: Elapsed Time: '24002.755974'
2026-03-09 14:42:50 (7868): Status Report: CPU Time: '98110.921875'
2026-03-09 16:29:27 (7868): Status Report: Elapsed Time: '30003.189745'
2026-03-09 16:29:27 (7868): Status Report: CPU Time: '122513.000000'
2026-03-09 17:08:30 (7868): Guest Log:  *** Job finished ***
2026-03-09 17:08:30 (7868): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:05,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:05,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:22,330 | INFO     | [monitor] cgroup control has ended
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:23,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977625458496)>', '<ExcThread(monitor, started 139977161676544)>']
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:24,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:24,172 | INFO     | [monitor] control thread has ended
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:28,755 | INFO     | all workflow threads have been joined
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:28,756 | INFO     | end of generic workflow (traces error code: 0)
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:28,756 | INFO     | traces error code: 0
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:28,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:28,978 [wrapper] ==== pilot stdout END ====
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:28,993 [wrapper] ==== wrapper stdout RESUME ====
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:29,008 [wrapper] pilotpid: 6022
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:29,022 [wrapper] Pilot exit status: 0
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:29,097 [wrapper] pandaids: 7039300864
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:29,184 [wrapper] cleanup supervisor_pilot  2351 6023
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:29,200 [wrapper] Test setup, not cleaning
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:29,216 [wrapper] apfmon messages muted
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:29,229 [wrapper] ==== wrapper stdout END ====
2026-03-09 17:08:30 (7868): Guest Log: 2026-03-09 21:08:29,244 [wrapper] ==== wrapper stderr END ====
2026-03-09 17:08:30 (7868): Guest Log:  *** Error codes and diagnostics ***
2026-03-09 17:08:30 (7868): Guest Log:     "exeErrorCode": 0,
2026-03-09 17:08:30 (7868): Guest Log:     "exeErrorDiag": "",
2026-03-09 17:08:30 (7868): Guest Log:     "pilotErrorCode": 0,
2026-03-09 17:08:30 (7868): Guest Log:     "pilotErrorDiag": "",
2026-03-09 17:08:30 (7868): Guest Log:  *** Listing of results directory ***
2026-03-09 17:08:30 (7868): Guest Log: total 195404
2026-03-09 17:08:30 (7868): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  7 22:32 pilot3.tar.gz
2026-03-09 17:08:30 (7868): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  7 22:33 runpilot2-wrapper.sh
2026-03-09 17:08:30 (7868): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  7 22:33 queuedata.json
2026-03-09 17:08:30 (7868): Guest Log: -rwxr-xr-x. 1 atlas atlas      5923 Mar  9 11:29 init_data.xml
2026-03-09 17:08:30 (7868): Guest Log: -rwxr-xr-x. 1 atlas atlas    597952 Mar  9 11:29 input.tar.gz
2026-03-09 17:08:30 (7868): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  9 11:29 start_atlas.sh
2026-03-09 17:08:30 (7868): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  9 11:29 EVNT.46701403._001261.pool.root.1 -> /data/./ATLAS.root_0
2026-03-09 17:08:30 (7868): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Mar  9 11:30 pandaJob.out
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas    990710 Mar  9 11:31 agis_schedconf.cvmfs.json
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas       425 Mar  9 11:31 workernode_map.json
2026-03-09 17:08:30 (7868): Guest Log: drwx------. 5 atlas atlas      4096 Mar  9 11:31 pilot3
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas 185513308 Mar  9 21:06 HITS.48955010._013012.pool.root.1
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas      1029 Mar  9 21:07 memory_monitor_summary.json
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar  9 21:07 agis_ddmendpoints.agis.ALL.json
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas    665228 Mar  9 21:07 log.48955010._013012.job.log.tgz.1
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas      6376 Mar  9 21:07 heartbeat.json
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas        95 Mar  9 21:08 pilot_heartbeat.json
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas      4802 Mar  9 21:08 pilotlog.txt
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas   4700831 Mar  9 21:08 log.48955010._013012.job.log.1
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas       357 Mar  9 21:08 output.list
2026-03-09 17:08:30 (7868): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  9 21:08 runtime_log
2026-03-09 17:08:30 (7868): Guest Log: -rw-------. 1 atlas atlas   5386240 Mar  9 21:08 result.tar.gz
2026-03-09 17:08:31 (7868): Guest Log: -rw-------. 1 atlas atlas       655 Mar  9 21:08 w8RMDm0NFJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmANXLDmFxW0Bo.diag
2026-03-09 17:08:31 (7868): Guest Log: -rw-r--r--. 1 atlas atlas      8740 Mar  9 21:08 runtime_log.err
2026-03-09 17:08:31 (7868): Guest Log: Looking for outputfile HITS.48955010._013012.pool.root.1
2026-03-09 17:08:31 (7868): Guest Log: HITS file was successfully produced
2026-03-09 17:08:31 (7868): Guest Log: -rw-------. 1 atlas atlas 185513308 Mar  9 21:06 /home/atlas/RunAtlas/HITS.48955010._013012.pool.root.1
2026-03-09 17:08:33 (7868): Guest Log: Successfully finished the ATLAS job!
2026-03-09 17:08:33 (7868): Guest Log: Copying the results back to the shared directory!
2026-03-09 17:08:33 (7868): Guest Log:  *** Contents of shared directory: ***
2026-03-09 17:08:33 (7868): Guest Log: total 621164
2026-03-09 17:08:33 (7868): Guest Log: -rwxrwxrwx. 1 root root 444543236 Mar  9 11:28 ATLAS.root_0
2026-03-09 17:08:33 (7868): Guest Log: -rwxrwxrwx. 1 root root 185513308 Mar  9 21:08 HITS.pool.root.1
2026-03-09 17:08:33 (7868): Guest Log: -rwxrwxrwx. 1 root root      5923 Mar  9 11:28 init_data.xml
2026-03-09 17:08:33 (7868): Guest Log: -rwxrwxrwx. 1 root root    597952 Mar  8 03:31 input.tar.gz
2026-03-09 17:08:33 (7868): Guest Log: -rwxrwxrwx. 1 root root   5386240 Mar  9 21:08 result.tar.gz
2026-03-09 17:08:33 (7868): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  8 03:31 start_atlas.sh
2026-03-09 17:08:33 (7868): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-09 17:08:33 (7868): VM Completion File Detected.
2026-03-09 17:08:33 (7868): Powering off VM.
2026-03-09 17:08:35 (7868): Successfully stopped VM.
2026-03-09 17:08:35 (7868): Deregistering VM. (boinc_2c3fec828276affc, slot#1)
2026-03-09 17:08:35 (7868): Removing network bandwidth throttle group from VM.
2026-03-09 17:08:36 (7868): Removing VM from VirtualBox.
2026-03-09 17:08:41 (7868): called boinc_finish(0)

</stderr_txt>
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