Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:22:03 (2511919): wrapper (7.7.26015): starting
09:22:03 (2511919): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 09:22:03] Arguments: --nthreads 4
[2026-03-09 09:22:03] Threads: 4
[2026-03-09 09:22:03] Checking for CVMFS
[2026-03-09 09:22:03] No cvmfs_config command found, will try listing directly
[2026-03-09 09:22:03] CVMFS is ok
[2026-03-09 09:22:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 09:22:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 09:22:03] Further information can be found at the LHC@home message board.
[2026-03-09 09:22:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 09:22:03] Checking for apptainer binary...
[2026-03-09 09:22:03] which: no apptainer in ((null))
[2026-03-09 09:22:03] apptainer is not installed, using version from CVMFS
[2026-03-09 09:22:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 09:22:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-09 09:22:04] apptainer works
[2026-03-09 09:22:04] Set ATHENA_PROC_NUMBER=4
[2026-03-09 09:22:04] Set ATHENA_CORE_NUMBER=4
[2026-03-09 09:22:04] Starting ATLAS job with PandaID=7039300780
[2026-03-09 09:22:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 10:48:57]  *** The last 200 lines of the pilot log: ***
[2026-03-09 10:48:57]  guid=22345863-3bf9-4083-a344-ccbd8d790d0d
[2026-03-09 10:48:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 10:48:57]  is_altstaged=None
[2026-03-09 10:48:57]  is_tar=False
[2026-03-09 10:48:57]  lfn=log.48955010._012928.job.log.tgz.1
[2026-03-09 10:48:57]  mtime=0
[2026-03-09 10:48:57]  protocol_id=None
[2026-03-09 10:48:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 10:48:57]  replicas=None
[2026-03-09 10:48:57]  scope=mc23_13p6TeV
[2026-03-09 10:48:57]  status=None
[2026-03-09 10:48:57]  status_code=0
[2026-03-09 10:48:57]  storage_token=
[2026-03-09 10:48:57]  surl=/var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039300780/log.48955010._012928.job.log.tgz.1
[2026-03-09 10:48:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/57/log.48955010._012928.job.log.tgz.1
[2026-03-09 10:48:57]  workdir=None
[2026-03-09 10:48:57] ]
[2026-03-09 10:48:57] 2026-03-09 09:48:04,619 | INFO     | transferring file log.48955010._012928.job.log.tgz.1 from /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039300780/log.48955010._012928.job.log.tgz.1 to /var/lib/
[2026-03-09 10:48:57] 2026-03-09 09:48:04,619 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039300780/log.48955010._012928.job.log.tgz.1 /var/lib/boinc/var/slot236/slots/0/
[2026-03-09 10:48:57] 2026-03-09 09:48:04,633 | INFO     | adding to output.list: log.48955010._012928.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/57/log.48955010._012928.job.log.tg
[2026-03-09 10:48:57] 2026-03-09 09:48:04,633 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 10:48:57] 2026-03-09 09:48:04,633 | INFO     | summary of transferred files:
[2026-03-09 10:48:57] 2026-03-09 09:48:04,633 | INFO     |  -- lfn=log.48955010._012928.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 10:48:57] 2026-03-09 09:48:04,634 | INFO     | stage-out finished correctly
[2026-03-09 10:48:57] 2026-03-09 09:48:05,228 | INFO     | time since job start (5124s) is within the limit (349056.0s)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,049 | INFO     | monitor loop #366: job 0:7039300780 is in state 'finished'
[2026-03-09 10:48:57] 2026-03-09 09:48:07,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,233 | INFO     | time since job start (5126s) is within the limit (349056.0s)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,417 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 10:48:57] 2026-03-09 09:48:07,462 | INFO     | job 7039300780 has state=finished
[2026-03-09 10:48:57] 2026-03-09 09:48:07,462 | INFO     | preparing for final server update for job 7039300780 in state='finished'
[2026-03-09 10:48:57] 2026-03-09 09:48:07,462 | INFO     | reading metadata from: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039300780/jobReport.json
[2026-03-09 10:48:57] 2026-03-09 09:48:07,463 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot236/slots/0/workernode_map.json
[2026-03-09 10:48:57] 2026-03-09 09:48:07,464 | INFO     | this job has now completed (state=finished)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,464 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,464 | INFO     | log transfer has been attempted: DONE
[2026-03-09 10:48:57] 2026-03-09 09:48:07,464 | INFO     | job 7039300780 has finished - writing final server update
[2026-03-09 10:48:57] 2026-03-09 09:48:07,464 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_815905/.job.ad'
[2026-03-09 10:48:57] 2026-03-09 09:48:07,464 | INFO     | total number of processed events: 400 (read)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,481 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039300780/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,481 | INFO     | extracted standard info from prmon json
[2026-03-09 10:48:57] 2026-03-09 09:48:07,481 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 10:48:57] 2026-03-09 09:48:07,482 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 10:48:57] 2026-03-09 09:48:07,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 10:48:57] 2026-03-09 09:48:07,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 10:48:57] 2026-03-09 09:48:07,483 | INFO     | fitting pss+swap vs Time
[2026-03-09 10:48:57] 2026-03-09 09:48:07,483 | INFO     | sum of square deviations: 136095575.0
[2026-03-09 10:48:57] 2026-03-09 09:48:07,483 | INFO     | sum of deviations: -423252434.5
[2026-03-09 10:48:57] 2026-03-09 09:48:07,483 | INFO     | mean x: 1773047209.5
[2026-03-09 10:48:57] 2026-03-09 09:48:07,483 | INFO     | mean y: 2337235.7763157897
[2026-03-09 10:48:57] 2026-03-09 09:48:07,483 | INFO     | intersect: 5516451474.276036
[2026-03-09 10:48:57] 2026-03-09 09:48:07,483 | INFO     | chi2: 0.0003752190522844025
[2026-03-09 10:48:57] 2026-03-09 09:48:07,483 | INFO     | current memory leak: -3.11 B/s (using 76 data points, chi2=0.00)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,483 | INFO     | could have reported an average CPU frequency of 3508 MHz (6 samples)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | ..............................
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | . Timing measurements:
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | . get job = 0 s
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | . initial setup = 14 s
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | . payload setup = 25 s
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | . stage-in = 0 s
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | . payload execution = 5080 s
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | . stage-out = 0 s
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | . log creation = 0 s
[2026-03-09 10:48:57] 2026-03-09 09:48:07,484 | INFO     | ..............................
[2026-03-09 10:48:57] 2026-03-09 09:48:07,530 | INFO     | 
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | job summary report
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | --------------------------------------------------
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | PanDA job id: 7039300780
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | task id: 48955010
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | errors: (none)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | pilot state: finished 
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | transexitcode: 0
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | exeerrorcode: 0
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | exeerrordiag: 
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | exitcode: 0
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | exitmsg: OK
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | cpuconsumptiontime: 18667 s
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | nevents: 400
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | neventsw: 0
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | pid: 2533636
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | pgrp: 2533636
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | corecount: 4
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | event service: False
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | sizes: {0: 2280189, 11: 2280189, 5109: 2306706, 5111: 2315728, 5114: 2315978}
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | --------------------------------------------------
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | 
[2026-03-09 10:48:57] 2026-03-09 09:48:07,531 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 10:48:57] 2026-03-09 09:48:07,545 | INFO     | job 7039300780 has completed (purged errors)
[2026-03-09 10:48:57] 2026-03-09 09:48:07,546 | INFO     | overall cleanup function is called
[2026-03-09 10:48:57] 2026-03-09 09:48:08,552 | INFO     | --- collectZombieJob: --- 10, [2533636]
[2026-03-09 10:48:57] 2026-03-09 09:48:08,552 | INFO     | zombie collector waiting for pid 2533636
[2026-03-09 10:48:57] 2026-03-09 09:48:08,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 10:48:57] 2026-03-09 09:48:08,552 | INFO     | collected zombie processes
[2026-03-09 10:48:57] 2026-03-09 09:48:08,552 | INFO     | will attempt to kill all subprocesses of pid=2533636
[2026-03-09 10:48:57] 2026-03-09 09:48:09,008 | INFO     | process IDs to be killed: [2533636] (in reverse order)
[2026-03-09 10:48:57] 2026-03-09 09:48:09,223 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 10:48:57] 2026-03-09 09:48:09,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 10:48:57] 2026-03-09 09:48:09,252 | INFO     | did not find any defunct processes belonging to 2533636
[2026-03-09 10:48:57] 2026-03-09 09:48:09,280 | INFO     | did not find any defunct processes belonging to 2533636
[2026-03-09 10:48:57] 2026-03-09 09:48:09,280 | INFO     | ready for new job
[2026-03-09 10:48:57] 2026-03-09 09:48:09,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 10:48:57] 2026-03-09 09:48:09,281 | INFO     | **************************************
[2026-03-09 10:48:57] 2026-03-09 09:48:09,281 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 10:48:57] 2026-03-09 09:48:09,281 | INFO     | **************************************
[2026-03-09 10:48:57] 2026-03-09 09:48:09,281 | INFO     | 
[2026-03-09 10:48:57] 2026-03-09 09:48:09,287 | INFO     | architecture information:
[2026-03-09 10:48:57] 2026-03-09 09:48:09,287 | INFO     | executing command: cat /etc/os-release
[2026-03-09 10:48:57] 2026-03-09 09:48:09,301 | INFO     | cat /etc/os-release:
[2026-03-09 10:48:57] NAME="CentOS Linux"
[2026-03-09 10:48:57] VERSION="7 (Core)"
[2026-03-09 10:48:57] ID="centos"
[2026-03-09 10:48:57] ID_LIKE="rhel fedora"
[2026-03-09 10:48:57] VERSION_ID="7"
[2026-03-09 10:48:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 10:48:57] ANSI_COLOR="0;31"
[2026-03-09 10:48:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 10:48:57] HOME_URL="https://www.centos.org/"
[2026-03-09 10:48:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 10:48:57] 
[2026-03-09 10:48:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 10:48:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 10:48:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 10:48:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 10:48:57] 
[2026-03-09 10:48:57] 2026-03-09 09:48:09,302 | INFO     | **************************************
[2026-03-09 10:48:57] 2026-03-09 09:48:09,804 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-09 10:48:57] 2026-03-09 09:48:09,821 | INFO     | sufficient remaining disk space (21074280448 B)
[2026-03-09 10:48:57] 2026-03-09 09:48:09,821 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 10:48:57] 2026-03-09 09:48:09,821 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 10:48:57] 2026-03-09 09:48:09,821 | INFO     | update_server=False
[2026-03-09 10:48:57] 2026-03-09 09:48:09,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 10:48:57] 2026-03-09 09:48:09,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 10:48:57] 2026-03-09 09:48:10,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 10:48:57] 2026-03-09 09:48:10,381 | INFO     | all data control threads have been joined
[2026-03-09 10:48:57] 2026-03-09 09:48:10,408 | INFO     | all job control threads have been joined
[2026-03-09 10:48:57] 2026-03-09 09:48:10,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 10:48:57] 2026-03-09 09:48:10,557 | INFO     | aborting loop
[2026-03-09 10:48:57] 2026-03-09 09:48:10,826 | INFO     | [job] retrieve thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:10,876 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:11,210 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:11,212 | INFO     | all payload control threads have been joined
[2026-03-09 10:48:57] 2026-03-09 09:48:11,237 | INFO     | [job] validate thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:11,380 | INFO     | [data] copytool_in thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:11,386 | INFO     | [data] control thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:11,413 | INFO     | [job] control thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:11,421 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:11,544 | INFO     | [payload] failed_post thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:11,562 | INFO     | [job] job monitor thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:11,778 | INFO     | [payload] validate_post thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:12,195 | INFO     | [data] copytool_out thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:12,217 | INFO     | [payload] control thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:12,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 10:48:57] 2026-03-09 09:48:13,545 | INFO     | [job] queue monitor thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:13,827 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:20,642 | INFO     | job.realtimelogging is not enabled
[2026-03-09 10:48:57] 2026-03-09 09:48:21,647 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 10:48:57] 2026-03-09 09:48:40,843 | INFO     | PID=2521511 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 10:48:57] 2026-03-09 09:48:40,843 | INFO     | .. there are 50 such processes running
[2026-03-09 10:48:57] 2026-03-09 09:48:40,843 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 10:48:57] 2026-03-09 09:48:40,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 10:48:57] 2026-03-09 09:48:40,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 10:48:57] 2026-03-09 09:48:50,143 | INFO     | [monitor] cgroup control has ended
[2026-03-09 10:48:57] 2026-03-09 09:48:52,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22736484054848)>', '<ExcThread(monitor, started 22736236967680)>']
[2026-03-09 10:48:57] 2026-03-09 09:48:52,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 10:48:57] 2026-03-09 09:48:52,905 | INFO     | [monitor] control thread has ended
[2026-03-09 10:48:57] 2026-03-09 09:48:57,102 | INFO     | all workflow threads have been joined
[2026-03-09 10:48:57] 2026-03-09 09:48:57,102 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 10:48:57] 2026-03-09 09:48:57,102 | INFO     | traces error code: 0
[2026-03-09 10:48:57] 2026-03-09 09:48:57,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 10:48:57] 2026-03-09 09:48:57,223 [wrapper] ==== pilot stdout END ====
[2026-03-09 10:48:57] 2026-03-09 09:48:57,225 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 10:48:57] 2026-03-09 09:48:57,227 [wrapper] pilotpid: 2521511
[2026-03-09 10:48:57] 2026-03-09 09:48:57,229 [wrapper] Pilot exit status: 0
[2026-03-09 10:48:57] 2026-03-09 09:48:57,238 [wrapper] pandaids: 7039300780
[2026-03-09 10:48:57] 2026-03-09 09:48:57,367 [wrapper] cleanup supervisor_pilot 3041986 2521512
[2026-03-09 10:48:57] 2026-03-09 09:48:57,371 [wrapper] Test setup, not cleaning
[2026-03-09 10:48:57] 2026-03-09 09:48:57,374 [wrapper] apfmon messages muted
[2026-03-09 10:48:57] 2026-03-09 09:48:57,376 [wrapper] ==== wrapper stdout END ====
[2026-03-09 10:48:57] 2026-03-09 09:48:57,378 [wrapper] ==== wrapper stderr END ====
[2026-03-09 10:48:57]  *** Error codes and diagnostics ***
[2026-03-09 10:48:57]     "exeErrorCode": 0,
[2026-03-09 10:48:57]     "exeErrorDiag": "",
[2026-03-09 10:48:57]     "pilotErrorCode": 0,
[2026-03-09 10:48:57]     "pilotErrorDiag": "",
[2026-03-09 10:48:57]  *** Listing of results directory ***
[2026-03-09 10:48:57] total 617724
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc    584627 Mar  7 23:32 pilot3.tar.gz
[2026-03-09 10:48:57] -rwx------. 1 boinc boinc     36322 Mar  7 23:33 runpilot2-wrapper.sh
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc      5111 Mar  7 23:33 queuedata.json
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc       100 Mar  9 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 10:48:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 09:21 run_atlas
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc       105 Mar  9 09:21 job.xml
[2026-03-09 10:48:57] -rw-r--r--. 2 boinc boinc 444070341 Mar  9 09:22 EVNT.46701403._001259.pool.root.1
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc      6708 Mar  9 09:22 init_data.xml
[2026-03-09 10:48:57] drwxrwx--x. 2 boinc boinc      4096 Mar  9 09:22 shared
[2026-03-09 10:48:57] -rw-r--r--. 2 boinc boinc    597955 Mar  9 09:22 input.tar.gz
[2026-03-09 10:48:57] -rw-r--r--. 2 boinc boinc     15845 Mar  9 09:22 start_atlas.sh
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc         0 Mar  9 09:22 boinc_lockfile
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc      2562 Mar  9 09:22 pandaJob.out
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc    987066 Mar  9 09:22 agis_schedconf.cvmfs.json
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc   1511578 Mar  9 09:22 agis_ddmendpoints.agis.ALL.json
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc       444 Mar  9 09:22 workernode_map.json
[2026-03-09 10:48:57] drwx------. 5 boinc boinc      4096 Mar  9 09:22 pilot3
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc 182536370 Mar  9 10:47 HITS.48955010._012928.pool.root.1
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc       531 Mar  9 10:47 boinc_task_state.xml
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc        95 Mar  9 10:47 pilot_heartbeat.json
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc      1029 Mar  9 10:47 memory_monitor_summary.json
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc    278404 Mar  9 10:48 log.48955010._012928.job.log.tgz.1
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc      6355 Mar  9 10:48 heartbeat.json
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc      8192 Mar  9 10:48 boinc_mmap_file
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc        27 Mar  9 10:48 wrapper_checkpoint.txt
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc      4902 Mar  9 10:48 pilotlog.txt
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc    743270 Mar  9 10:48 log.48955010._012928.job.log.1
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc       357 Mar  9 10:48 output.list
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc       620 Mar  9 10:48 runtime_log
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc   1034240 Mar  9 10:48 result.tar.gz
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc      9221 Mar  9 10:48 runtime_log.err
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc       661 Mar  9 10:48 QTMKDm0NFJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUMXLDmTbmBun.diag
[2026-03-09 10:48:57] -rw-r--r--. 1 boinc boinc      8242 Mar  9 10:48 stderr.txt
[2026-03-09 10:48:57] HITS file was successfully produced:
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc 182536370 Mar  9 10:47 shared/HITS.pool.root.1
[2026-03-09 10:48:57]  *** Contents of shared directory: ***
[2026-03-09 10:48:57] total 613544
[2026-03-09 10:48:57] -rw-r--r--. 2 boinc boinc 444070341 Mar  9 09:22 ATLAS.root_0
[2026-03-09 10:48:57] -rw-r--r--. 2 boinc boinc    597955 Mar  9 09:22 input.tar.gz
[2026-03-09 10:48:57] -rw-r--r--. 2 boinc boinc     15845 Mar  9 09:22 start_atlas.sh
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc 182536370 Mar  9 10:47 HITS.pool.root.1
[2026-03-09 10:48:57] -rw-------. 1 boinc boinc   1034240 Mar  9 10:48 result.tar.gz
10:48:58 (2511919): run_atlas exited; CPU time 18889.949960
10:48:58 (2511919): called boinc_finish(0)

</stderr_txt>
]]>

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