Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:56:38 (12294): wrapper (7.7.26015): starting
11:56:38 (12294): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 11:56:38] Arguments: --nthreads 8
[2026-03-08 11:56:38] Threads: 8
[2026-03-08 11:56:38] Checking for CVMFS
[2026-03-08 11:56:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 11:56:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 11:56:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 11:56:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 11:56:42] 2.11.2.0 22482 118826 135980 157036 2 54 17379480 25165825 4834 130560 163 43483161 99.851 28807263 1029 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-08 11:56:42] CVMFS is ok
[2026-03-08 11:56:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 11:56:42] Checking for apptainer binary...
[2026-03-08 11:56:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 11:56:42] Running /usr/bin/apptainer --version
[2026-03-08 11:56:43] apptainer version 1.3.2-1.el7
[2026-03-08 11:56:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 11:56:52] cg-vwn445.simple-grid.lan
[2026-03-08 11:56:52] apptainer works
[2026-03-08 11:56:52] Set ATHENA_PROC_NUMBER=8
[2026-03-08 11:56:52] Set ATHENA_CORE_NUMBER=8
[2026-03-08 11:56:52] Starting ATLAS job with PandaID=7039300448
[2026-03-08 11:56:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 15:50:47]  *** The last 200 lines of the pilot log: ***
[2026-03-08 15:50:47] 2026-03-08 14:49:47,950 | INFO     | maximum number of monitored processes: 8
[2026-03-08 15:50:47] 2026-03-08 14:49:47,952 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7039300448/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 15:50:47] 2026-03-08 14:49:47,952 | INFO     | extracted standard info from prmon json
[2026-03-08 15:50:47] 2026-03-08 14:49:47,953 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 15:50:47] 2026-03-08 14:49:47,953 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 15:50:47] 2026-03-08 14:49:47,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 15:50:47] 2026-03-08 14:49:47,953 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 15:50:47] 2026-03-08 14:49:47,958 | INFO     | fitting pss+swap vs Time
[2026-03-08 15:50:47] 2026-03-08 14:49:47,958 | INFO     | sum of square deviations: 3301699115.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,960 | INFO     | sum of deviations: 80446470264.5
[2026-03-08 15:50:47] 2026-03-08 14:49:47,960 | INFO     | mean x: 1772974651.5
[2026-03-08 15:50:47] 2026-03-08 14:49:47,961 | INFO     | mean y: 2427338.077272727
[2026-03-08 15:50:47] 2026-03-08 14:49:47,961 | INFO     | intersect: -43196406842.06485
[2026-03-08 15:50:47] 2026-03-08 14:49:47,961 | INFO     | chi2: 6.0116944487423885
[2026-03-08 15:50:47] 2026-03-08 14:49:47,962 | INFO     | sum of square deviations: 3081657780.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,963 | INFO     | sum of deviations: 93028326147.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,963 | INFO     | mean x: 1772974499.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,964 | INFO     | mean y: 2435871.3906976744
[2026-03-08 15:50:47] 2026-03-08 14:49:47,964 | INFO     | intersect: -53519681676.42018
[2026-03-08 15:50:47] 2026-03-08 14:49:47,964 | INFO     | chi2: 5.27924052190395
[2026-03-08 15:50:47] 2026-03-08 14:49:47,964 | INFO     | current chi2=5.27924052190395 (change=12.18381827425816 %)
[2026-03-08 15:50:47] 2026-03-08 14:49:47,964 | INFO     | right removable region: 214
[2026-03-08 15:50:47] 2026-03-08 14:49:47,965 | INFO     | sum of square deviations: 3081657780.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,967 | INFO     | sum of deviations: 8442241278.000006
[2026-03-08 15:50:47] 2026-03-08 14:49:47,967 | INFO     | mean x: 1772974804.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,967 | INFO     | mean y: 2477181.930232558
[2026-03-08 15:50:47] 2026-03-08 14:49:47,967 | INFO     | intersect: -4854610185.889944
[2026-03-08 15:50:47] 2026-03-08 14:49:47,968 | INFO     | chi2: 1.717179876268709
[2026-03-08 15:50:47] 2026-03-08 14:49:47,968 | INFO     | current chi2=1.717179876268709 (change=71.43600875077853 %)
[2026-03-08 15:50:47] 2026-03-08 14:49:47,969 | INFO     | sum of square deviations: 2871616632.5
[2026-03-08 15:50:47] 2026-03-08 14:49:47,970 | INFO     | sum of deviations: -20865789594.5
[2026-03-08 15:50:47] 2026-03-08 14:49:47,970 | INFO     | mean x: 1772974956.5
[2026-03-08 15:50:47] 2026-03-08 14:49:47,971 | INFO     | mean y: 2498310.738095238
[2026-03-08 15:50:47] 2026-03-08 14:49:47,971 | INFO     | intersect: 12885319081.433985
[2026-03-08 15:50:47] 2026-03-08 14:49:47,971 | INFO     | chi2: 0.8322540821097016
[2026-03-08 15:50:47] 2026-03-08 14:49:47,971 | INFO     | current chi2=0.8322540821097016 (change=51.53366903424692 %)
[2026-03-08 15:50:47] 2026-03-08 14:49:47,972 | INFO     | sum of square deviations: 2671343110.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,973 | INFO     | sum of deviations: -23296981164.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,974 | INFO     | mean x: 1772975109.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,974 | INFO     | mean y: 2500132.843902439
[2026-03-08 15:50:47] 2026-03-08 14:49:47,974 | INFO     | intersect: 15464747406.131777
[2026-03-08 15:50:47] 2026-03-08 14:49:47,974 | INFO     | chi2: 0.8130416947654845
[2026-03-08 15:50:47] 2026-03-08 14:49:47,975 | INFO     | current chi2=0.8130416947654845 (change=2.308476192212262 %)
[2026-03-08 15:50:47] 2026-03-08 14:49:47,975 | INFO     | left removable region: 30
[2026-03-08 15:50:47] 2026-03-08 14:49:47,975 | INFO     | sum of square deviations: 1931608310.0
[2026-03-08 15:50:47] 2026-03-08 14:49:47,976 | INFO     | sum of deviations: -7223022992.999999
[2026-03-08 15:50:47] 2026-03-08 14:49:47,976 | INFO     | mean x: 1772975383.5
[2026-03-08 15:50:47] 2026-03-08 14:49:47,977 | INFO     | mean y: 2509294.2391304346
[2026-03-08 15:50:47] 2026-03-08 14:49:47,977 | INFO     | intersect: 6632343041.974193
[2026-03-08 15:50:47] 2026-03-08 14:49:47,977 | INFO     | chi2: 0.013722277745791715
[2026-03-08 15:50:47] 2026-03-08 14:49:47,977 | INFO     | current memory leak: -3.74 B/s (using 184 data points, chi2=0.01)
[2026-03-08 15:50:47] 2026-03-08 14:49:47,978 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-08 15:50:47] 2026-03-08 14:49:47,978 | INFO     | ..............................
[2026-03-08 15:50:47] 2026-03-08 14:49:47,978 | INFO     | . Timing measurements:
[2026-03-08 15:50:47] 2026-03-08 14:49:47,978 | INFO     | . get job = 0 s
[2026-03-08 15:50:47] 2026-03-08 14:49:47,978 | INFO     | . initial setup = 105 s
[2026-03-08 15:50:47] 2026-03-08 14:49:47,979 | INFO     | . payload setup = 120 s
[2026-03-08 15:50:47] 2026-03-08 14:49:47,979 | INFO     | . stage-in = 0 s
[2026-03-08 15:50:47] 2026-03-08 14:49:47,979 | INFO     | . payload execution = 13524 s
[2026-03-08 15:50:47] 2026-03-08 14:49:47,979 | INFO     | . stage-out = 3 s
[2026-03-08 15:50:47] 2026-03-08 14:49:47,979 | INFO     | . log creation = 1 s
[2026-03-08 15:50:47] 2026-03-08 14:49:47,979 | INFO     | ..............................
[2026-03-08 15:50:47] 2026-03-08 14:49:48,129 | INFO     | 
[2026-03-08 15:50:47] 2026-03-08 14:49:48,129 | INFO     | job summary report
[2026-03-08 15:50:47] 2026-03-08 14:49:48,129 | INFO     | --------------------------------------------------
[2026-03-08 15:50:47] 2026-03-08 14:49:48,129 | INFO     | PanDA job id: 7039300448
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | task id: 48955006
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | errors: (none)
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | pilot state: finished 
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | transexitcode: 0
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | exeerrorcode: 0
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | exeerrordiag: 
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | exitcode: 0
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | exitmsg: OK
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | cpuconsumptiontime: 51983 s
[2026-03-08 15:50:47] 2026-03-08 14:49:48,130 | INFO     | nevents: 400
[2026-03-08 15:50:47] 2026-03-08 14:49:48,131 | INFO     | neventsw: 0
[2026-03-08 15:50:47] 2026-03-08 14:49:48,131 | INFO     | pid: 20936
[2026-03-08 15:50:47] 2026-03-08 14:49:48,131 | INFO     | pgrp: 20936
[2026-03-08 15:50:47] 2026-03-08 14:49:48,131 | INFO     | corecount: 8
[2026-03-08 15:50:47] 2026-03-08 14:49:48,131 | INFO     | event service: False
[2026-03-08 15:50:47] 2026-03-08 14:49:48,131 | INFO     | sizes: {0: 2295371, 1: 2295832, 13649: 2326089, 13652: 2335089, 13653: 2335339}
[2026-03-08 15:50:47] 2026-03-08 14:49:48,131 | INFO     | --------------------------------------------------
[2026-03-08 15:50:47] 2026-03-08 14:49:48,131 | INFO     | 
[2026-03-08 15:50:47] 2026-03-08 14:49:48,131 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-03-08 15:50:47] 2026-03-08 14:49:48,205 | INFO     | time since job start (13654s) is within the limit (349056.0s)
[2026-03-08 15:50:47] 2026-03-08 14:49:48,650 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,650 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,650 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,650 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,652 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 15:50:47] 2026-03-08 14:49:48,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,652 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 15:50:47] 2026-03-08 14:49:48,652 | INFO     | job 7039300448 has completed (purged errors)
[2026-03-08 15:50:47] 2026-03-08 14:49:48,652 | INFO     | overall cleanup function is called
[2026-03-08 15:50:47] 2026-03-08 14:49:49,661 | INFO     | --- collectZombieJob: --- 10, [20936]
[2026-03-08 15:50:47] 2026-03-08 14:49:49,661 | INFO     | zombie collector waiting for pid 20936
[2026-03-08 15:50:47] 2026-03-08 14:49:49,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 15:50:47] 2026-03-08 14:49:49,662 | INFO     | collected zombie processes
[2026-03-08 15:50:47] 2026-03-08 14:49:49,662 | INFO     | will attempt to kill all subprocesses of pid=20936
[2026-03-08 15:50:47] 2026-03-08 14:49:49,776 | INFO     | process IDs to be killed: [20936] (in reverse order)
[2026-03-08 15:50:47] 2026-03-08 14:49:50,664 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 15:50:47] 2026-03-08 14:49:50,664 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 15:50:47] 2026-03-08 14:49:50,667 | INFO     | did not find any defunct processes belonging to 20936
[2026-03-08 15:50:47] 2026-03-08 14:49:50,670 | INFO     | did not find any defunct processes belonging to 20936
[2026-03-08 15:50:47] 2026-03-08 14:49:50,670 | INFO     | ready for new job
[2026-03-08 15:50:47] 2026-03-08 14:49:50,671 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 15:50:47] 2026-03-08 14:49:50,673 | INFO     | **************************************
[2026-03-08 15:50:47] 2026-03-08 14:49:50,673 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 15:50:47] 2026-03-08 14:49:50,673 | INFO     | **************************************
[2026-03-08 15:50:47] 2026-03-08 14:49:50,673 | INFO     | 
[2026-03-08 15:50:47] 2026-03-08 14:49:50,674 | INFO     | pilot is running in a VM
[2026-03-08 15:50:47] 2026-03-08 14:49:50,674 | INFO     | architecture information:
[2026-03-08 15:50:47] 2026-03-08 14:49:50,674 | INFO     | executing command: cat /etc/os-release
[2026-03-08 15:50:47] 2026-03-08 14:49:50,815 | INFO     | cat /etc/os-release:
[2026-03-08 15:50:47] NAME="CentOS Linux"
[2026-03-08 15:50:47] VERSION="7 (Core)"
[2026-03-08 15:50:47] ID="centos"
[2026-03-08 15:50:47] ID_LIKE="rhel fedora"
[2026-03-08 15:50:47] VERSION_ID="7"
[2026-03-08 15:50:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 15:50:47] ANSI_COLOR="0;31"
[2026-03-08 15:50:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 15:50:47] HOME_URL="https://www.centos.org/"
[2026-03-08 15:50:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 15:50:47] 
[2026-03-08 15:50:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 15:50:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 15:50:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 15:50:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 15:50:47] 
[2026-03-08 15:50:47] 2026-03-08 14:49:50,816 | INFO     | **************************************
[2026-03-08 15:50:47] 2026-03-08 14:49:51,319 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-03-08 15:50:47] 2026-03-08 14:49:51,572 | INFO     | sufficient remaining disk space (495515074560 B)
[2026-03-08 15:50:47] 2026-03-08 14:49:51,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 15:50:47] 2026-03-08 14:49:51,572 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 15:50:47] 2026-03-08 14:49:51,572 | INFO     | update_server=False
[2026-03-08 15:50:47] 2026-03-08 14:49:51,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 15:50:47] 2026-03-08 14:49:51,573 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 15:50:47] 2026-03-08 14:49:51,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 15:50:47] 2026-03-08 14:49:51,581 | INFO     | aborting loop
[2026-03-08 15:50:47] 2026-03-08 14:49:52,093 | INFO     | all job control threads have been joined
[2026-03-08 15:50:47] 2026-03-08 14:49:52,467 | INFO     | all data control threads have been joined
[2026-03-08 15:50:47] 2026-03-08 14:49:52,578 | INFO     | [job] retrieve thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:52,587 | INFO     | [job] job monitor thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:52,710 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:52,757 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:53,045 | INFO     | all payload control threads have been joined
[2026-03-08 15:50:47] 2026-03-08 14:49:53,099 | INFO     | [job] control thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:53,123 | INFO     | [payload] validate_post thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:53,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 15:50:47] 2026-03-08 14:49:53,221 | INFO     | [job] validate thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:53,359 | INFO     | [payload] failed_post thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:53,369 | INFO     | [data] copytool_in thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:53,472 | INFO     | [data] control thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:53,580 | INFO     | [data] copytool_out thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:53,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 15:50:47] 2026-03-08 14:49:54,049 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:54,051 | INFO     | [payload] control thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:54,143 | INFO     | [job] queue monitor thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:49:57,957 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:50:02,155 | INFO     | job.realtimelogging is not enabled
[2026-03-08 15:50:47] 2026-03-08 14:50:03,161 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 15:50:47] 2026-03-08 14:50:21,402 | INFO     | PID=16415 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-08 15:50:47] 2026-03-08 14:50:21,402 | INFO     | .. there are 9 such processes running
[2026-03-08 15:50:47] 2026-03-08 14:50:21,402 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 15:50:47] 2026-03-08 14:50:21,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 15:50:47] 2026-03-08 14:50:21,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 15:50:47] 2026-03-08 14:50:37,333 | INFO     | [monitor] cgroup control has ended
[2026-03-08 15:50:47] 2026-03-08 14:50:37,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519348172608)>', '<ExcThread(monitor, started 140518780565248)>']
[2026-03-08 15:50:47] 2026-03-08 14:50:37,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 15:50:47] 2026-03-08 14:50:37,496 | INFO     | [monitor] control thread has ended
[2026-03-08 15:50:47] 2026-03-08 14:50:42,500 | INFO     | all workflow threads have been joined
[2026-03-08 15:50:47] 2026-03-08 14:50:42,500 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 15:50:47] 2026-03-08 14:50:42,501 | INFO     | traces error code: 0
[2026-03-08 15:50:47] 2026-03-08 14:50:42,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 15:50:47] 2026-03-08 14:50:42,864 [wrapper] ==== pilot stdout END ====
[2026-03-08 15:50:47] 2026-03-08 14:50:42,968 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 15:50:47] 2026-03-08 14:50:43,065 [wrapper] pilotpid: 16415
[2026-03-08 15:50:47] 2026-03-08 14:50:43,149 [wrapper] Pilot exit status: 0
[2026-03-08 15:50:47] 2026-03-08 14:50:43,645 [wrapper] pandaids: 7039300448
[2026-03-08 15:50:47] 2026-03-08 14:50:44,492 [wrapper] cleanup supervisor_pilot 28997 16416
[2026-03-08 15:50:47] 2026-03-08 14:50:44,553 [wrapper] Test setup, not cleaning
[2026-03-08 15:50:47] 2026-03-08 14:50:44,636 [wrapper] apfmon messages muted
[2026-03-08 15:50:47] 2026-03-08 14:50:44,716 [wrapper] ==== wrapper stdout END ====
[2026-03-08 15:50:47] 2026-03-08 14:50:44,812 [wrapper] ==== wrapper stderr END ====
[2026-03-08 15:50:47]  *** Error codes and diagnostics ***
[2026-03-08 15:50:47]     "exeErrorCode": 0,
[2026-03-08 15:50:47]     "exeErrorDiag": "",
[2026-03-08 15:50:47]     "pilotErrorCode": 0,
[2026-03-08 15:50:47]     "pilotErrorDiag": "",
[2026-03-08 15:50:47]  *** Listing of results directory ***
[2026-03-08 15:50:47] total 616408
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc      5111 Mar  7 23:32 queuedata.json
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc    584627 Mar  7 23:32 pilot3.tar.gz
[2026-03-08 15:50:47] -rwx------. 1 boinc boinc     36322 Mar  7 23:32 runpilot2-wrapper.sh
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc       100 Mar  8 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 15:50:47] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 11:56 run_atlas
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc       105 Mar  8 11:56 job.xml
[2026-03-08 15:50:47] -rw-r--r--. 2 boinc boinc 437986126 Mar  8 11:56 EVNT.46701403._000421.pool.root.1
[2026-03-08 15:50:47] -rw-r--r--. 2 boinc boinc     15845 Mar  8 11:56 start_atlas.sh
[2026-03-08 15:50:47] drwxrwx--x. 2 boinc boinc        68 Mar  8 11:56 shared
[2026-03-08 15:50:47] -rw-r--r--. 2 boinc boinc    597953 Mar  8 11:56 input.tar.gz
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc      6392 Mar  8 11:56 init_data.xml
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc         0 Mar  8 11:56 boinc_lockfile
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc      2563 Mar  8 11:56 pandaJob.out
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc       415 Mar  8 12:02 workernode_map.json
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc    999169 Mar  8 12:02 agis_schedconf.cvmfs.json
[2026-03-08 15:50:47] drwx------. 5 boinc boinc      4096 Mar  8 12:02 pilot3
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc 184598432 Mar  8 15:48 HITS.48955006._021009.pool.root.1
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc       531 Mar  8 15:49 boinc_task_state.xml
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc      1013 Mar  8 15:49 memory_monitor_summary.json
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc   1521291 Mar  8 15:49 agis_ddmendpoints.agis.ALL.json
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc    442055 Mar  8 15:49 log.48955006._021009.job.log.tgz.1
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc      6324 Mar  8 15:49 heartbeat.json
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc        95 Mar  8 15:49 pilot_heartbeat.json
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc      4953 Mar  8 15:50 pilotlog.txt
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc   1908575 Mar  8 15:50 log.48955006._021009.job.log.1
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc       357 Mar  8 15:50 output.list
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc       620 Mar  8 15:50 runtime_log
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc   2365440 Mar  8 15:50 result.tar.gz
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc      8192 Mar  8 15:50 boinc_mmap_file
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc      8832 Mar  8 15:50 runtime_log.err
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc       656 Mar  8 15:50 1a3KDm9MFJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgwULDmNuqeNm.diag
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc        28 Mar  8 15:50 wrapper_checkpoint.txt
[2026-03-08 15:50:47] -rw-r--r--. 1 boinc boinc     20657 Mar  8 15:50 stderr.txt
[2026-03-08 15:50:47] HITS file was successfully produced:
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc 184598432 Mar  8 15:48 shared/HITS.pool.root.1
[2026-03-08 15:50:47]  *** Contents of shared directory: ***
[2026-03-08 15:50:47] total 610908
[2026-03-08 15:50:47] -rw-r--r--. 2 boinc boinc 437986126 Mar  8 11:56 ATLAS.root_0
[2026-03-08 15:50:47] -rw-r--r--. 2 boinc boinc     15845 Mar  8 11:56 start_atlas.sh
[2026-03-08 15:50:47] -rw-r--r--. 2 boinc boinc    597953 Mar  8 11:56 input.tar.gz
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc 184598432 Mar  8 15:48 HITS.pool.root.1
[2026-03-08 15:50:47] -rw-------. 1 boinc boinc   2365440 Mar  8 15:50 result.tar.gz
15:50:49 (12294): run_atlas exited; CPU time 52193.308743
15:50:49 (12294): called boinc_finish(0)

</stderr_txt>
]]>

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