Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-11 10:06:11 (6568): vboxwrapper version 26210
2026-03-11 10:06:11 (6568): BOINC client version: 8.0.2
2026-03-11 10:06:29 (6568): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-11 10:06:31 (6568): Successfully copied 'init_data.xml' to the shared directory.
2026-03-11 10:06:31 (6568): Create VM. (boinc_f1ebeb31994a5ed8, slot#2)
2026-03-11 10:06:32 (6568): Setting Memory Size for VM. (4800MB)
2026-03-11 10:06:32 (6568): Setting CPU Count for VM. (8)
2026-03-11 10:06:32 (6568): Setting Chipset Options for VM.
2026-03-11 10:06:32 (6568): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-11 10:06:39 (6568): Setting Boot Options for VM.
2026-03-11 10:06:55 (6568): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-11 10:06:55 (6568): Enabling VM Network Access.
2026-03-11 10:06:55 (6568): Disabling USB Support for VM.
2026-03-11 10:06:55 (6568): Disabling COM Port Support for VM.
2026-03-11 10:06:56 (6568): Disabling LPT Port Support for VM.
2026-03-11 10:07:07 (6568): Disabling Audio Support for VM.
2026-03-11 10:07:11 (6568): Disabling Clipboard Support for VM.
2026-03-11 10:07:12 (6568): Disabling Drag and Drop Support for VM.
2026-03-11 10:07:12 (6568): Adding storage controller(s) to VM.
2026-03-11 10:07:12 (6568): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-11 10:07:37 (6568): Adding VirtualBox Guest Additions to VM.
2026-03-11 10:07:48 (6568): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-11 10:07:48 (6568): forwarding host port 62005 to guest port 80
2026-03-11 10:07:49 (6568): Enabling remote desktop for VM.
2026-03-11 10:07:49 (6568): Required extension pack not installed, remote desktop not enabled.
2026-03-11 10:07:49 (6568): Enabling shared directory for VM.
2026-03-11 10:07:55 (6568): Starting VM using VBoxManage interface. (boinc_f1ebeb31994a5ed8, slot#2)
2026-03-11 10:08:09 (6568): Successfully started VM. (PID = '18008')
2026-03-11 10:08:09 (6568): Reporting VM Process ID to BOINC.
2026-03-11 10:08:09 (6568): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-11 10:08:09 (6568): Guest Log: CPUID EDX: 0x178bfbff
2026-03-11 10:08:09 (6568): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-11 10:08:09 (6568): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-11 10:08:09 (6568): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-11 10:08:09 (6568): Guest Log: BIOS: Booting from Hard Disk...
2026-03-11 10:08:09 (6568): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-11 10:08:09 (6568): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-11 10:08:13 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-11 10:08:16 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-11 10:08:16 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-11 10:08:16 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-11 10:08:16 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-11 10:08:16 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-11 10:08:18 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-11 10:08:18 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-11 10:08:18 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-11 10:08:29 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-11 10:08:29 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-11 10:08:33 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-11 10:08:33 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-11 10:08:38 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-11 10:08:38 (6568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-11 10:08:38 (6568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-11 10:08:38 (6568): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-11 10:08:38 (6568): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-11 10:08:38 (6568): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-11 10:08:38 (6568): Guest Log: 00:00:00.000148 main     Log opened 2026-03-11T10:08:15.325650000Z
2026-03-11 10:08:38 (6568): Guest Log: 00:00:00.000238 main     OS Product: Linux
2026-03-11 10:08:38 (6568): Guest Log: 00:00:00.000273 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-11 10:08:38 (6568): Guest Log: 00:00:00.000299 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-11 10:08:38 (6568): Guest Log: 00:00:00.000323 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-11 10:08:38 (6568): Guest Log: 00:00:00.000323 main     Process ID: 1368
2026-03-11 10:08:38 (6568): Guest Log: 00:00:00.000324 main     Package type: LINUX_64BITS_GENERIC
2026-03-11 10:08:38 (6568): Guest Log: 00:00:00.000987 main     5.2.32 r132073 started. Verbose level = 0
2026-03-11 10:08:38 (6568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-11 10:08:38 (6568): Guest Log: [INFO] Mounting shared directory
2026-03-11 10:08:38 (6568): Guest Log: [INFO] Checking for init_data.xml
2026-03-11 10:08:38 (6568): Guest Log: 00:00:10.005324 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 788 844 854 000ns (GuestNow=1 773 194 906 483 966 000 ns GuestLast=1 773 223 695 328 820 000 ns fSetTimeLastLoop=true )
2026-03-11 10:08:38 (6568): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-11 10:08:38 (6568): Detected: Web Application Enabled (http://localhost:62005)
2026-03-11 10:08:38 (6568): Preference change detected
2026-03-11 10:08:38 (6568): Setting CPU throttle for VM. (75%)
2026-03-11 10:08:38 (6568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-11 10:09:09 (6568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-11 10:09:09 (6568): Guest Log: [INFO] Detected branch: prod
2026-03-11 10:09:09 (6568): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-11 10:09:09 (6568): Guest Log: Copying input files
2026-03-11 10:09:09 (6568): Guest Log: Copied input files into RunAtlas.
2026-03-11 10:09:09 (6568): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-11 10:09:09 (6568): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-11 10:09:09 (6568): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-11 10:09:09 (6568): Guest Log: Further information can be found at the LHC@home message board.
2026-03-11 10:09:43 (6568): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-11 10:09:43 (6568): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-11 10:09:44 (6568): Guest Log: 2.6.3.0 1672 0 32204 157137 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-11 10:09:44 (6568): Guest Log: copied the webapp to /var/www
2026-03-11 10:09:48 (6568): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-11 10:09:48 (6568): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-11 10:09:48 (6568): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-11 10:09:48 (6568): Guest Log:  *** Starting ATLAS job. (PandaID=7039267363 taskID=48955006) ***
2026-03-11 12:03:01 (6568): Guest Log:  *** Job finished ***
2026-03-11 12:03:01 (6568): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-11 12:03:08 (6568): Guest Log: 2026-03-11 04:02:35,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-11 12:03:08 (6568): Guest Log: 2026-03-11 04:02:35,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-11 12:03:14 (6568): Guest Log: 2026-03-11 04:02:46,784 | INFO     | [monitor] cgroup control has ended
2026-03-11 12:03:14 (6568): Guest Log: 2026-03-11 04:02:47,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053295810368)>', '<ExcThread(monitor, started 140052617217792)>']
2026-03-11 12:03:29 (6568): Guest Log: 2026-03-11 04:02:48,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-11 12:03:29 (6568): Guest Log: 2026-03-11 04:02:48,650 | INFO     | [monitor] control thread has ended
2026-03-11 12:03:36 (6568): Guest Log: 2026-03-11 04:02:52,815 | INFO     | all workflow threads have been joined
2026-03-11 12:03:44 (6568): Guest Log: 2026-03-11 04:02:52,815 | INFO     | end of generic workflow (traces error code: 0)
2026-03-11 12:03:49 (6568): Guest Log: 2026-03-11 04:02:52,815 | INFO     | traces error code: 0
2026-03-11 12:03:49 (6568): Guest Log: 2026-03-11 04:02:52,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-11 12:03:49 (6568): Guest Log: 2026-03-11 04:02:52,923 [wrapper] ==== pilot stdout END ====
2026-03-11 12:03:49 (6568): Guest Log: 2026-03-11 04:02:52,928 [wrapper] ==== wrapper stdout RESUME ====
2026-03-11 12:03:49 (6568): Guest Log: 2026-03-11 04:02:52,932 [wrapper] pilotpid: 6129
2026-03-11 12:03:49 (6568): Guest Log: 2026-03-11 04:02:52,937 [wrapper] Pilot exit status: 0
2026-03-11 12:03:49 (6568): Guest Log: 2026-03-11 04:02:54,274 [wrapper] pandaids: 7039267363
2026-03-11 12:03:49 (6568): Guest Log: 2026-03-11 04:02:54,311 [wrapper] cleanup supervisor_pilot 25867 6130
2026-03-11 12:04:06 (6568): Guest Log: 2026-03-11 04:02:54,316 [wrapper] Test setup, not cleaning
2026-03-11 12:04:06 (6568): Guest Log: 2026-03-11 04:02:54,321 [wrapper] apfmon messages muted
2026-03-11 12:04:06 (6568): Guest Log: 2026-03-11 04:02:54,327 [wrapper] ==== wrapper stdout END ====
2026-03-11 12:04:06 (6568): Guest Log: 2026-03-11 04:02:54,333 [wrapper] ==== wrapper stderr END ====
2026-03-11 12:04:06 (6568): Guest Log:  *** Error codes and diagnostics ***
2026-03-11 12:04:06 (6568): Guest Log:     "exeErrorCode": 0,
2026-03-11 12:04:06 (6568): Guest Log:     "exeErrorDiag": "",
2026-03-11 12:04:06 (6568): Guest Log:     "pilotErrorCode": 0,
2026-03-11 12:04:06 (6568): Guest Log:     "pilotErrorDiag": "",
2026-03-11 12:04:06 (6568): Guest Log:  *** Listing of results directory ***
2026-03-11 12:04:06 (6568): Guest Log: total 190360
2026-03-11 12:04:14 (6568): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  7 20:25 pilot3.tar.gz
2026-03-11 12:04:14 (6568): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  7 20:28 runpilot2-wrapper.sh
2026-03-11 12:04:14 (6568): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  7 20:30 queuedata.json
2026-03-11 12:04:14 (6568): Guest Log: -rwxr-xr-x. 1 atlas atlas      9180 Mar 11 02:09 init_data.xml
2026-03-11 12:04:14 (6568): Guest Log: -rwxr-xr-x. 1 atlas atlas    597956 Mar 11 02:09 input.tar.gz
2026-03-11 12:04:14 (6568): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 11 02:09 start_atlas.sh
2026-03-11 12:04:14 (6568): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 11 02:09 EVNT.46701403._000394.pool.root.1 -> /data/./ATLAS.root_0
2026-03-11 12:04:14 (6568): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Mar 11 02:09 pandaJob.out
2026-03-11 12:04:14 (6568): Guest Log: -rw-------. 1 atlas atlas   1006644 Mar 11 02:14 agis_schedconf.cvmfs.json
2026-03-11 12:04:14 (6568): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 11 02:14 agis_ddmendpoints.agis.ALL.json
2026-03-11 12:04:14 (6568): Guest Log: -rw-------. 1 atlas atlas       433 Mar 11 02:15 workernode_map.json
2026-03-11 12:04:14 (6568): Guest Log: drwx------. 5 atlas atlas      4096 Mar 11 02:15 pilot3
2026-03-11 12:04:14 (6568): Guest Log: -rw-------. 1 atlas atlas 188538570 Mar 11 04:01 HITS.48955006._019671.pool.root.1
2026-03-11 12:04:14 (6568): Guest Log: -rw-------. 1 atlas atlas      1029 Mar 11 04:01 memory_monitor_summary.json
2026-03-11 12:04:14 (6568): Guest Log: -rw-------. 1 atlas atlas        95 Mar 11 04:01 pilot_heartbeat.json
2026-03-11 12:04:20 (6568): Guest Log: -rw-------. 1 atlas atlas    353744 Mar 11 04:02 log.48955006._019671.job.log.tgz.1
2026-03-11 12:04:20 (6568): Guest Log: -rw-------. 1 atlas atlas      6374 Mar 11 04:02 heartbeat.json
2026-03-11 12:04:20 (6568): Guest Log: -rw-------. 1 atlas atlas      4873 Mar 11 04:02 pilotlog.txt
2026-03-11 12:04:20 (6568): Guest Log: -rw-------. 1 atlas atlas    907131 Mar 11 04:02 log.48955006._019671.job.log.1
2026-03-11 12:04:20 (6568): Guest Log: -rw-------. 1 atlas atlas       357 Mar 11 04:02 output.list
2026-03-11 12:04:20 (6568): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 11 04:02 runtime_log
2026-03-11 12:04:20 (6568): Guest Log: -rw-------. 1 atlas atlas   1280000 Mar 11 04:02 result.tar.gz
2026-03-11 12:04:20 (6568): Guest Log: -rw-r--r--. 1 atlas atlas      8775 Mar 11 04:02 runtime_log.err
2026-03-11 12:04:20 (6568): Guest Log: -rw-------. 1 atlas atlas       657 Mar 11 04:02 jSwLDmlRDJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqkULDmiXPoFn.diag
2026-03-11 12:04:20 (6568): Guest Log: Looking for outputfile HITS.48955006._019671.pool.root.1
2026-03-11 12:04:20 (6568): Guest Log: HITS file was successfully produced
2026-03-11 12:04:20 (6568): Guest Log: -rw-------. 1 atlas atlas 188538570 Mar 11 04:01 /home/atlas/RunAtlas/HITS.48955006._019671.pool.root.1
2026-03-11 12:04:28 (6568): Guest Log: Successfully finished the ATLAS job!
2026-03-11 12:04:28 (6568): Guest Log: Copying the results back to the shared directory!
2026-03-11 12:04:36 (6568): Guest Log:  *** Contents of shared directory: ***
2026-03-11 12:04:36 (6568): Guest Log: total 613988
2026-03-11 12:04:36 (6568): Guest Log: -rwxrwxrwx. 1 root root 438275008 Mar 11 02:06 ATLAS.root_0
2026-03-11 12:05:05 (6568): Guest Log: -rwxrwxrwx. 1 root root 188538570 Mar 11 04:02 HITS.pool.root.1
2026-03-11 12:05:05 (6568): Guest Log: -rwxrwxrwx. 1 root root      9180 Mar 11 02:06 init_data.xml
2026-03-11 12:05:15 (6568): Guest Log: -rwxrwxrwx. 1 root root    597956 Mar  8 02:03 input.tar.gz
2026-03-11 12:05:15 (6568): Guest Log: -rwxrwxrwx. 1 root root   1280000 Mar 11 04:02 result.tar.gz
2026-03-11 12:05:21 (6568): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  8 02:03 start_atlas.sh
2026-03-11 12:05:21 (6568): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-11 12:05:21 (6568): Guest Log: 01:54:46.712824 control  Guest control service stopped
2026-03-11 12:05:27 (6568): Guest Log: 01:54:46.712938 control  Guest control worker returned with rc=VINF_SUCCESS
2026-03-11 12:05:27 (6568): Guest Log: 01:54:46.712993 main     Session 0 is about to close ...
2026-03-11 12:05:27 (6568): Guest Log: 01:54:46.713028 main     Stopping all guest processes ...
2026-03-11 12:05:27 (6568): Guest Log: 01:54:46.713054 main     Closing all guest files ...
2026-03-11 12:05:27 (6568): Guest Log: 01:54:46.880277 main     Ended.
2026-03-11 12:05:37 (6568): VM is no longer is a running state. It is in 'poweredoff'.
2026-03-11 12:05:37 (6568): VM state change detected. (old = 'running', new = 'poweredoff')
2026-03-11 12:05:37 (6568): VM Completion File Detected.
2026-03-11 12:05:43 (6568): Powering off VM.
2026-03-11 12:05:49 (6568): Deregistering VM. (boinc_f1ebeb31994a5ed8, slot#2)
2026-03-11 12:06:20 (6568): Removing network bandwidth throttle group from VM.
2026-03-11 12:06:27 (6568): Removing VM from VirtualBox.
2026-03-11 12:06:47 (6568): called boinc_finish(0)

</stderr_txt>
]]>

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