Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:21:02 (2553623): wrapper (7.7.26015): starting
20:21:02 (2553623): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 20:21:02] Arguments: --nthreads 4
[2026-03-08 20:21:02] Threads: 4
[2026-03-08 20:21:02] Checking for CVMFS
[2026-03-08 20:21:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 20:21:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 20:21:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 20:21:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 20:21:03] 2.9.2.0 3074 14515 102056 157051 0 50 28593945 36864000 0 130560 0 6445871 99.984 544816 13401 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-08 20:21:03] CVMFS is ok
[2026-03-08 20:21:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 20:21:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 20:21:03] Further information can be found at the LHC@home message board.
[2026-03-08 20:21:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 20:21:03] Checking for apptainer binary...
[2026-03-08 20:21:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 20:21:03] Running /usr/bin/apptainer --version
[2026-03-08 20:21:03] apptainer version 1.4.1-1.1
[2026-03-08 20:21:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 20:21:03] thA314
[2026-03-08 20:21:03] apptainer works
[2026-03-08 20:21:03] Set ATHENA_PROC_NUMBER=4
[2026-03-08 20:21:03] Set ATHENA_CORE_NUMBER=4
[2026-03-08 20:21:03] Starting ATLAS job with PandaID=7039265878
[2026-03-08 20:21:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 21:28:25]  *** The last 200 lines of the pilot log: ***
[2026-03-08 21:28:25] 2026-03-08 20:27:37,176 | INFO     | all data control threads have been joined
[2026-03-08 21:28:25] 2026-03-08 20:27:37,691 | INFO     | [job] retrieve thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:37,692 | INFO     | [job] queue monitor thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:37,721 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:37,750 | INFO     | [job] job monitor thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:37,935 | INFO     | [payload] control thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:38,013 | INFO     | all job control threads have been joined
[2026-03-08 21:28:25] 2026-03-08 20:27:38,157 | INFO     | [payload] validate_post thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:38,182 | INFO     | [data] control thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:38,384 | INFO     | [payload] failed_post thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:38,739 | INFO     | [job] validate thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:38,843 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:38,890 | INFO     | [data] copytool_out thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:38,924 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:39,018 | INFO     | [job] control thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:39,070 | INFO     | [data] copytool_in thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:39,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 21:28:25] 2026-03-08 20:27:43,781 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:27:47,425 | INFO     | job.realtimelogging is not enabled
[2026-03-08 21:28:25] 2026-03-08 20:27:48,431 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 21:28:25] 2026-03-08 20:28:06,578 | INFO     | PID=2557747 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 21:28:25] 2026-03-08 20:28:06,578 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 21:28:25] 2026-03-08 20:28:06,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 21:28:25] 2026-03-08 20:28:06,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 21:28:25] 2026-03-08 20:28:19,690 | INFO     | [monitor] cgroup control has ended
[2026-03-08 21:28:25] 2026-03-08 20:28:20,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371665680192)>', '<ExcThread(monitor, started 140370721625856)>']
[2026-03-08 21:28:25] 2026-03-08 20:28:20,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 21:28:25] 2026-03-08 20:28:20,649 | INFO     | [monitor] control thread has ended
[2026-03-08 21:28:25] 2026-03-08 20:28:25,312 | INFO     | all workflow threads have been joined
[2026-03-08 21:28:25] 2026-03-08 20:28:25,313 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 21:28:25] 2026-03-08 20:28:25,313 | INFO     | traces error code: 0
[2026-03-08 21:28:25] 2026-03-08 20:28:25,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 21:28:25] 2026-03-08 20:28:25,393 [wrapper] ==== pilot stdout END ====
[2026-03-08 21:28:25] 2026-03-08 20:28:25,397 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 21:28:25] 2026-03-08 20:28:25,400 [wrapper] pilotpid: 2557747
[2026-03-08 21:28:25] 2026-03-08 20:28:25,404 [wrapper] Pilot exit status: 0
[2026-03-08 21:28:25] 2026-03-08 20:28:25,415 [wrapper] pandaids: 7039265878
[2026-03-08 21:28:25] 2026-03-08 20:28:25,439 [wrapper] cleanup supervisor_pilot 2568746 2557748
[2026-03-08 21:28:25] 2026-03-08 20:28:25,443 [wrapper] Test setup, not cleaning
[2026-03-08 21:28:25] 2026-03-08 20:28:25,447 [wrapper] apfmon messages muted
[2026-03-08 21:28:25] 2026-03-08 20:28:25,450 [wrapper] ==== wrapper stdout END ====
[2026-03-08 21:28:25] 2026-03-08 20:28:25,454 [wrapper] ==== wrapper stderr END ====
[2026-03-08 21:28:25]  *** Error codes and diagnostics ***
[2026-03-08 21:28:25]     "exeErrorCode": 0,
[2026-03-08 21:28:25]     "exeErrorDiag": "",
[2026-03-08 21:28:25]     "pilotErrorCode": 0,
[2026-03-08 21:28:25]     "pilotErrorDiag": "",
[2026-03-08 21:28:25]  *** Listing of results directory ***
[2026-03-08 21:28:25] total 617056
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc    584627 Mar  7 21:25 pilot3.tar.gz
[2026-03-08 21:28:25] -rwx------ 1 boinc boinc     36322 Mar  7 21:28 runpilot2-wrapper.sh
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc      5111 Mar  7 21:30 queuedata.json
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc       100 Mar  8 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 21:28:25] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 20:21 run_atlas
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc       105 Mar  8 20:21 job.xml
[2026-03-08 21:28:25] -rw-r--r-- 2 boinc boinc 442505735 Mar  8 20:21 EVNT.46701403._000379.pool.root.1
[2026-03-08 21:28:25] -rw-r--r-- 2 boinc boinc    597951 Mar  8 20:21 input.tar.gz
[2026-03-08 21:28:25] -rw-r--r-- 2 boinc boinc     15845 Mar  8 20:21 start_atlas.sh
[2026-03-08 21:28:25] drwxrwx--x 2 boinc boinc      4096 Mar  8 20:21 shared
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc         0 Mar  8 20:21 boinc_setup_complete
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc      6376 Mar  8 20:21 init_data.xml
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc         0 Mar  8 20:21 boinc_lockfile
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc      2564 Mar  8 20:21 pandaJob.out
[2026-03-08 21:28:25] -rw------- 1 boinc boinc    999108 Mar  8 20:21 agis_schedconf.cvmfs.json
[2026-03-08 21:28:25] -rw------- 1 boinc boinc   1511578 Mar  8 20:21 agis_ddmendpoints.agis.ALL.json
[2026-03-08 21:28:25] -rw------- 1 boinc boinc       421 Mar  8 20:21 workernode_map.json
[2026-03-08 21:28:25] drwx------ 5 boinc boinc      4096 Mar  8 20:21 pilot3
[2026-03-08 21:28:25] -rw------- 1 boinc boinc 183685243 Mar  8 21:27 HITS.48955006._018944.pool.root.1
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc       530 Mar  8 21:27 boinc_task_state.xml
[2026-03-08 21:28:25] -rw------- 1 boinc boinc      1024 Mar  8 21:27 memory_monitor_summary.json
[2026-03-08 21:28:25] -rw------- 1 boinc boinc    285829 Mar  8 21:27 log.48955006._018944.job.log.tgz.1
[2026-03-08 21:28:25] -rw------- 1 boinc boinc        95 Mar  8 21:27 pilot_heartbeat.json
[2026-03-08 21:28:25] -rw------- 1 boinc boinc      6308 Mar  8 21:27 heartbeat.json
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc      8192 Mar  8 21:28 boinc_mmap_file
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc        27 Mar  8 21:28 wrapper_checkpoint.txt
[2026-03-08 21:28:25] -rw------- 1 boinc boinc      4820 Mar  8 21:28 pilotlog.txt
[2026-03-08 21:28:25] -rw------- 1 boinc boinc    593663 Mar  8 21:28 log.48955006._018944.job.log.1
[2026-03-08 21:28:25] -rw------- 1 boinc boinc       357 Mar  8 21:28 output.list
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc       620 Mar  8 21:28 runtime_log
[2026-03-08 21:28:25] -rw------- 1 boinc boinc    901120 Mar  8 21:28 result.tar.gz
[2026-03-08 21:28:25] -rw------- 1 boinc boinc       657 Mar  8 21:28 sc2NDmWRDJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmF1WLDmB5Itdn.diag
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc      8896 Mar  8 21:28 runtime_log.err
[2026-03-08 21:28:25] -rw-r--r-- 1 boinc boinc      6727 Mar  8 21:28 stderr.txt
[2026-03-08 21:28:25] HITS file was successfully produced:
[2026-03-08 21:28:25] -rw------- 1 boinc boinc 183685243 Mar  8 21:27 shared/HITS.pool.root.1
[2026-03-08 21:28:25]  *** Contents of shared directory: ***
[2026-03-08 21:28:25] total 613008
[2026-03-08 21:28:25] -rw-r--r-- 2 boinc boinc 442505735 Mar  8 20:21 ATLAS.root_0
[2026-03-08 21:28:25] -rw-r--r-- 2 boinc boinc    597951 Mar  8 20:21 input.tar.gz
[2026-03-08 21:28:25] -rw-r--r-- 2 boinc boinc     15845 Mar  8 20:21 start_atlas.sh
[2026-03-08 21:28:25] -rw------- 1 boinc boinc 183685243 Mar  8 21:27 HITS.pool.root.1
[2026-03-08 21:28:25] -rw------- 1 boinc boinc    901120 Mar  8 21:28 result.tar.gz
21:28:26 (2553623): run_atlas exited; CPU time 14924.095827
21:28:26 (2553623): called boinc_finish(0)

</stderr_txt>
]]>

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