Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:14:25 (2802349): wrapper (7.7.26015): starting
00:14:25 (2802349): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 00:14:25] Arguments: --nthreads 4
[2026-03-09 00:14:25] Threads: 4
[2026-03-09 00:14:25] Checking for CVMFS
[2026-03-09 00:14:25] No cvmfs_config command found, will try listing directly
[2026-03-09 00:14:25] CVMFS is ok
[2026-03-09 00:14:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 00:14:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 00:14:25] Further information can be found at the LHC@home message board.
[2026-03-09 00:14:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 00:14:25] Checking for apptainer binary...
[2026-03-09 00:14:25] which: no apptainer in ((null))
[2026-03-09 00:14:25] apptainer is not installed, using version from CVMFS
[2026-03-09 00:14:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 00:14:25] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-09 00:14:25] apptainer works
[2026-03-09 00:14:25] Set ATHENA_PROC_NUMBER=4
[2026-03-09 00:14:25] Set ATHENA_CORE_NUMBER=4
[2026-03-09 00:14:25] Starting ATLAS job with PandaID=7045512255
[2026-03-09 00:14:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 01:54:54]  *** The last 200 lines of the pilot log: ***
[2026-03-09 01:54:54]  is_tar=False
[2026-03-09 01:54:54]  lfn=log.48966988._015412.job.log.tgz.1
[2026-03-09 01:54:54]  mtime=0
[2026-03-09 01:54:54]  protocol_id=None
[2026-03-09 01:54:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 01:54:54]  replicas=None
[2026-03-09 01:54:54]  scope=mc23_13p6TeV
[2026-03-09 01:54:54]  status=None
[2026-03-09 01:54:54]  status_code=0
[2026-03-09 01:54:54]  storage_token=
[2026-03-09 01:54:54]  surl=/var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7045512255/log.48966988._015412.job.log.tgz.1
[2026-03-09 01:54:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/b5/log.48966988._015412.job.log.tgz.1
[2026-03-09 01:54:54]  workdir=None
[2026-03-09 01:54:54] ]
[2026-03-09 01:54:54] 2026-03-09 00:53:55,300 | INFO     | transferring file log.48966988._015412.job.log.tgz.1 from /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7045512255/log.48966988._015412.job.log.tgz.1 to /var/lib/
[2026-03-09 01:54:54] 2026-03-09 00:53:55,300 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7045512255/log.48966988._015412.job.log.tgz.1 /var/lib/boinc/var/slot236/slots/0/
[2026-03-09 01:54:54] 2026-03-09 00:53:55,322 | INFO     | adding to output.list: log.48966988._015412.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/b5/log.48966988._015412.job.log.tg
[2026-03-09 01:54:54] 2026-03-09 00:53:55,322 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 01:54:54] 2026-03-09 00:53:55,323 | INFO     | summary of transferred files:
[2026-03-09 01:54:54] 2026-03-09 00:53:55,323 | INFO     |  -- lfn=log.48966988._015412.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 01:54:54] 2026-03-09 00:53:55,323 | INFO     | stage-out finished correctly
[2026-03-09 01:54:54] 2026-03-09 00:53:56,480 | WARNING  | process 2812878 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 01:54:54] 2026-03-09 00:53:56,481 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7045512255/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 01:54:54] 2026-03-09 00:53:57,306 | INFO     | PID=2806981 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 01:54:54] 2026-03-09 00:53:57,307 | INFO     | .. there are 49 such processes running
[2026-03-09 01:54:54] 2026-03-09 00:53:57,516 | INFO     | number of running child processes to parent process 2812878: 1
[2026-03-09 01:54:54] 2026-03-09 00:53:57,516 | INFO     | maximum number of monitored processes: 6
[2026-03-09 01:54:54] 2026-03-09 00:53:58,307 | INFO     | time since job start (5959s) is within the limit (349056.0s)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,844 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 01:54:54] 2026-03-09 00:53:58,890 | INFO     | job 7045512255 has state=finished
[2026-03-09 01:54:54] 2026-03-09 00:53:58,891 | INFO     | preparing for final server update for job 7045512255 in state='finished'
[2026-03-09 01:54:54] 2026-03-09 00:53:58,891 | INFO     | reading metadata from: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7045512255/jobReport.json
[2026-03-09 01:54:54] 2026-03-09 00:53:58,892 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot236/slots/0/workernode_map.json
[2026-03-09 01:54:54] 2026-03-09 00:53:58,892 | INFO     | this job has now completed (state=finished)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,893 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,893 | INFO     | log transfer has been attempted: DONE
[2026-03-09 01:54:54] 2026-03-09 00:53:58,893 | INFO     | job 7045512255 has finished - writing final server update
[2026-03-09 01:54:54] 2026-03-09 00:53:58,893 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_391459/.job.ad'
[2026-03-09 01:54:54] 2026-03-09 00:53:58,893 | INFO     | total number of processed events: 400 (read)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,910 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7045512255/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,911 | INFO     | extracted standard info from prmon json
[2026-03-09 01:54:54] 2026-03-09 00:53:58,911 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 01:54:54] 2026-03-09 00:53:58,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 01:54:54] 2026-03-09 00:53:58,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 01:54:54] 2026-03-09 00:53:58,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 01:54:54] 2026-03-09 00:53:58,912 | INFO     | fitting pss+swap vs Time
[2026-03-09 01:54:54] 2026-03-09 00:53:58,912 | INFO     | sum of square deviations: 233641590.0
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | sum of deviations: -1527040389.0
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | mean x: 1773014751.0
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | mean y: 2338568.021978022
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | intersect: 11590451519.443762
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | chi2: 0.0009714690340686247
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | current memory leak: -6.54 B/s (using 91 data points, chi2=0.00)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | could have reported an average CPU frequency of 3560 MHz (7 samples)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | ..............................
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | . Timing measurements:
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | . get job = 0 s
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | . initial setup = 5 s
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | . payload setup = 5 s
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | . stage-in = 0 s
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | . payload execution = 5934 s
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | . stage-out = 0 s
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | . log creation = 0 s
[2026-03-09 01:54:54] 2026-03-09 00:53:58,913 | INFO     | ..............................
[2026-03-09 01:54:54] 2026-03-09 00:53:58,960 | INFO     | 
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | job summary report
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | --------------------------------------------------
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | PanDA job id: 7045512255
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | task id: 48966988
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | errors: (none)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | pilot state: finished 
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | transexitcode: 0
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | exeerrorcode: 0
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | exeerrordiag: 
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | exitcode: 0
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | exitmsg: OK
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | cpuconsumptiontime: 22774 s
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | nevents: 400
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | neventsw: 0
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | pid: 2812878
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | pgrp: 2812878
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | corecount: 4
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | event service: False
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | sizes: {0: 2280283, 11: 2280283, 5943: 2307074, 5944: 2316151, 5948: 2316345}
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | --------------------------------------------------
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | 
[2026-03-09 01:54:54] 2026-03-09 00:53:58,961 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,981 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,982 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 01:54:54] 2026-03-09 00:53:58,982 | INFO     | job 7045512255 has completed (purged errors)
[2026-03-09 01:54:54] 2026-03-09 00:53:58,982 | INFO     | overall cleanup function is called
[2026-03-09 01:54:54] 2026-03-09 00:53:59,988 | INFO     | --- collectZombieJob: --- 10, [2812878]
[2026-03-09 01:54:54] 2026-03-09 00:53:59,989 | INFO     | zombie collector waiting for pid 2812878
[2026-03-09 01:54:54] 2026-03-09 00:53:59,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 01:54:54] 2026-03-09 00:53:59,989 | INFO     | collected zombie processes
[2026-03-09 01:54:54] 2026-03-09 00:53:59,989 | INFO     | will attempt to kill all subprocesses of pid=2812878
[2026-03-09 01:54:54] 2026-03-09 00:54:00,443 | INFO     | process IDs to be killed: [2812878] (in reverse order)
[2026-03-09 01:54:54] 2026-03-09 00:54:00,671 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 01:54:54] 2026-03-09 00:54:00,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 01:54:54] 2026-03-09 00:54:00,702 | INFO     | did not find any defunct processes belonging to 2812878
[2026-03-09 01:54:54] 2026-03-09 00:54:00,732 | INFO     | did not find any defunct processes belonging to 2812878
[2026-03-09 01:54:54] 2026-03-09 00:54:00,733 | INFO     | ready for new job
[2026-03-09 01:54:54] 2026-03-09 00:54:00,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 01:54:54] 2026-03-09 00:54:00,734 | INFO     | **************************************
[2026-03-09 01:54:54] 2026-03-09 00:54:00,734 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 01:54:54] 2026-03-09 00:54:00,734 | INFO     | **************************************
[2026-03-09 01:54:54] 2026-03-09 00:54:00,734 | INFO     | 
[2026-03-09 01:54:54] 2026-03-09 00:54:00,740 | INFO     | architecture information:
[2026-03-09 01:54:54] 2026-03-09 00:54:00,740 | INFO     | executing command: cat /etc/os-release
[2026-03-09 01:54:54] 2026-03-09 00:54:00,755 | INFO     | cat /etc/os-release:
[2026-03-09 01:54:54] NAME="CentOS Linux"
[2026-03-09 01:54:54] VERSION="7 (Core)"
[2026-03-09 01:54:54] ID="centos"
[2026-03-09 01:54:54] ID_LIKE="rhel fedora"
[2026-03-09 01:54:54] VERSION_ID="7"
[2026-03-09 01:54:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 01:54:54] ANSI_COLOR="0;31"
[2026-03-09 01:54:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 01:54:54] HOME_URL="https://www.centos.org/"
[2026-03-09 01:54:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 01:54:54] 
[2026-03-09 01:54:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 01:54:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 01:54:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 01:54:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 01:54:54] 
[2026-03-09 01:54:54] 2026-03-09 00:54:00,756 | INFO     | **************************************
[2026-03-09 01:54:54] 2026-03-09 00:54:01,258 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-09 01:54:54] 2026-03-09 00:54:01,274 | INFO     | sufficient remaining disk space (20854079488 B)
[2026-03-09 01:54:54] 2026-03-09 00:54:01,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 01:54:54] 2026-03-09 00:54:01,274 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 01:54:54] 2026-03-09 00:54:01,274 | INFO     | update_server=False
[2026-03-09 01:54:54] 2026-03-09 00:54:01,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 01:54:54] 2026-03-09 00:54:01,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 01:54:54] 2026-03-09 00:54:01,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 01:54:54] 2026-03-09 00:54:01,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 01:54:54] 2026-03-09 00:54:01,275 | INFO     | aborting loop
[2026-03-09 01:54:54] 2026-03-09 00:54:01,311 | INFO     | all payload control threads have been joined
[2026-03-09 01:54:54] 2026-03-09 00:54:01,852 | INFO     | all job control threads have been joined
[2026-03-09 01:54:54] 2026-03-09 00:54:01,906 | INFO     | all data control threads have been joined
[2026-03-09 01:54:54] 2026-03-09 00:54:02,279 | INFO     | [job] retrieve thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:02,280 | INFO     | [job] job monitor thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:02,317 | INFO     | [payload] control thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:02,857 | INFO     | [job] control thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:02,894 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:02,896 | INFO     | [job] validate thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:02,911 | INFO     | [data] control thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:03,020 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:03,114 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:03,124 | INFO     | [data] copytool_in thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:03,280 | INFO     | [data] copytool_out thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:03,331 | INFO     | [payload] failed_post thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:03,834 | INFO     | [payload] validate_post thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:03,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 01:54:54] 2026-03-09 00:54:04,975 | INFO     | [job] queue monitor thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:05,281 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:11,947 | INFO     | job.realtimelogging is not enabled
[2026-03-09 01:54:54] 2026-03-09 00:54:12,952 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 01:54:54] 2026-03-09 00:54:31,947 | INFO     | PID=2806981 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 01:54:54] 2026-03-09 00:54:31,947 | INFO     | .. there are 49 such processes running
[2026-03-09 01:54:54] 2026-03-09 00:54:31,948 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 01:54:54] 2026-03-09 00:54:31,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 01:54:54] 2026-03-09 00:54:31,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 01:54:54] 2026-03-09 00:54:49,160 | INFO     | [monitor] cgroup control has ended
[2026-03-09 01:54:54] 2026-03-09 00:54:49,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22391762995008)>', '<ExcThread(monitor, started 22391528113920)>']
[2026-03-09 01:54:54] 2026-03-09 00:54:50,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 01:54:54] 2026-03-09 00:54:50,044 | INFO     | [monitor] control thread has ended
[2026-03-09 01:54:54] 2026-03-09 00:54:54,584 | INFO     | all workflow threads have been joined
[2026-03-09 01:54:54] 2026-03-09 00:54:54,584 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 01:54:54] 2026-03-09 00:54:54,584 | INFO     | traces error code: 0
[2026-03-09 01:54:54] 2026-03-09 00:54:54,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 01:54:54] 2026-03-09 00:54:54,743 [wrapper] ==== pilot stdout END ====
[2026-03-09 01:54:54] 2026-03-09 00:54:54,744 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 01:54:54] 2026-03-09 00:54:54,746 [wrapper] pilotpid: 2806981
[2026-03-09 01:54:54] 2026-03-09 00:54:54,754 [wrapper] Pilot exit status: 0
[2026-03-09 01:54:54] 2026-03-09 00:54:54,764 [wrapper] pandaids: 7045512255
[2026-03-09 01:54:54] 2026-03-09 00:54:54,900 [wrapper] cleanup supervisor_pilot 3652045 2806982
[2026-03-09 01:54:54] 2026-03-09 00:54:54,903 [wrapper] Test setup, not cleaning
[2026-03-09 01:54:54] 2026-03-09 00:54:54,906 [wrapper] apfmon messages muted
[2026-03-09 01:54:54] 2026-03-09 00:54:54,908 [wrapper] ==== wrapper stdout END ====
[2026-03-09 01:54:54] 2026-03-09 00:54:54,912 [wrapper] ==== wrapper stderr END ====
[2026-03-09 01:54:54]  *** Error codes and diagnostics ***
[2026-03-09 01:54:54]     "exeErrorCode": 0,
[2026-03-09 01:54:54]     "exeErrorDiag": "",
[2026-03-09 01:54:54]     "pilotErrorCode": 0,
[2026-03-09 01:54:54]     "pilotErrorDiag": "",
[2026-03-09 01:54:54]  *** Listing of results directory ***
[2026-03-09 01:54:54] total 405588
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc    584627 Mar  7 22:34 pilot3.tar.gz
[2026-03-09 01:54:54] -rwx------. 1 boinc boinc     36322 Mar  7 22:35 runpilot2-wrapper.sh
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc      5111 Mar  7 22:35 queuedata.json
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc       100 Mar  9 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 01:54:54] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 00:14 run_atlas
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc       105 Mar  9 00:14 job.xml
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc      6708 Mar  9 00:14 init_data.xml
[2026-03-09 01:54:54] -rw-r--r--. 2 boinc boinc 212086058 Mar  9 00:14 EVNT.48966985._000604.pool.root.1
[2026-03-09 01:54:54] -rw-r--r--. 2 boinc boinc     15845 Mar  9 00:14 start_atlas.sh
[2026-03-09 01:54:54] drwxrwx--x. 2 boinc boinc      4096 Mar  9 00:14 shared
[2026-03-09 01:54:54] -rw-r--r--. 2 boinc boinc    597960 Mar  9 00:14 input.tar.gz
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc         0 Mar  9 00:14 boinc_lockfile
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc      2592 Mar  9 00:14 pandaJob.out
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc    999108 Mar  9 00:14 agis_schedconf.cvmfs.json
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc   1511578 Mar  9 00:14 agis_ddmendpoints.agis.ALL.json
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc       440 Mar  9 00:14 workernode_map.json
[2026-03-09 01:54:54] drwx------. 5 boinc boinc      4096 Mar  9 00:14 pilot3
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc       529 Mar  9 01:53 boinc_task_state.xml
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc 197011884 Mar  9 01:53 HITS.48966988._015412.pool.root.1
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc      1031 Mar  9 01:53 memory_monitor_summary.json
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc    284429 Mar  9 01:53 log.48966988._015412.job.log.tgz.1
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc      6353 Mar  9 01:53 heartbeat.json
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc        27 Mar  9 01:54 wrapper_checkpoint.txt
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc      8192 Mar  9 01:54 boinc_mmap_file
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc        95 Mar  9 01:54 pilot_heartbeat.json
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc      4902 Mar  9 01:54 pilotlog.txt
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc    860834 Mar  9 01:54 log.48966988._015412.job.log.1
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc       357 Mar  9 01:54 output.list
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc       620 Mar  9 01:54 runtime_log
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc   1167360 Mar  9 01:54 result.tar.gz
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc      9221 Mar  9 01:54 runtime_log.err
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc       663 Mar  9 01:54 0pzLDmkTEJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmY5WLDmCellFo.diag
[2026-03-09 01:54:54] -rw-r--r--. 1 boinc boinc     21513 Mar  9 01:54 stderr.txt
[2026-03-09 01:54:54] HITS file was successfully produced:
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc 197011884 Mar  9 01:53 shared/HITS.pool.root.1
[2026-03-09 01:54:54]  *** Contents of shared directory: ***
[2026-03-09 01:54:54] total 401260
[2026-03-09 01:54:54] -rw-r--r--. 2 boinc boinc 212086058 Mar  9 00:14 ATLAS.root_0
[2026-03-09 01:54:54] -rw-r--r--. 2 boinc boinc     15845 Mar  9 00:14 start_atlas.sh
[2026-03-09 01:54:54] -rw-r--r--. 2 boinc boinc    597960 Mar  9 00:14 input.tar.gz
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc 197011884 Mar  9 01:53 HITS.pool.root.1
[2026-03-09 01:54:54] -rw-------. 1 boinc boinc   1167360 Mar  9 01:54 result.tar.gz
01:54:56 (2802349): run_atlas exited; CPU time 23049.616441
01:54:56 (2802349): called boinc_finish(0)

</stderr_txt>
]]>

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