Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:53:25 (31980): wrapper (7.7.26015): starting
10:53:25 (31980): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 10:53:25] Arguments: --nthreads 8
[2026-03-08 10:53:25] Threads: 8
[2026-03-08 10:53:25] Checking for CVMFS
[2026-03-08 10:53:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 10:53:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 10:53:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 10:53:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 10:53:29] 2.11.2.0 820 118779 135344 157034 3 94 13041227 25165824 1081 130560 161 59030301 99.853 36023092 1094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-08 10:53:29] CVMFS is ok
[2026-03-08 10:53:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 10:53:29] Checking for apptainer binary...
[2026-03-08 10:53:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 10:53:29] Running /usr/bin/apptainer --version
[2026-03-08 10:53:29] apptainer version 1.3.2-1.el7
[2026-03-08 10:53:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 10:53:51] cg-vwn494.simple-grid.lan
[2026-03-08 10:53:51] apptainer works
[2026-03-08 10:53:51] Set ATHENA_PROC_NUMBER=8
[2026-03-08 10:53:51] Set ATHENA_CORE_NUMBER=8
[2026-03-08 10:53:51] Starting ATLAS job with PandaID=7045512181
[2026-03-08 10:53:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 14:41:01]  *** The last 200 lines of the pilot log: ***
[2026-03-08 14:41:01] 2026-03-08 13:40:23,471 | INFO     | job 7045512181 has finished - writing final server update
[2026-03-08 14:41:01] 2026-03-08 13:40:23,471 | INFO     | total number of processed events: 400 (read)
[2026-03-08 14:41:01] 2026-03-08 13:40:23,473 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7045512181/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 14:41:01] 2026-03-08 13:40:23,474 | INFO     | extracted standard info from prmon json
[2026-03-08 14:41:01] 2026-03-08 13:40:23,474 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 14:41:01] 2026-03-08 13:40:23,474 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 14:41:01] 2026-03-08 13:40:23,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 14:41:01] 2026-03-08 13:40:23,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 14:41:01] 2026-03-08 13:40:23,479 | INFO     | fitting pss+swap vs Time
[2026-03-08 14:41:01] 2026-03-08 13:40:23,479 | INFO     | sum of square deviations: 3301699115.0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,481 | INFO     | sum of deviations: -1273331994.999998
[2026-03-08 14:41:01] 2026-03-08 13:40:23,481 | INFO     | mean x: 1772970485.5
[2026-03-08 14:41:01] 2026-03-08 13:40:23,481 | INFO     | mean y: 2483012.390909091
[2026-03-08 14:41:01] 2026-03-08 13:40:23,481 | INFO     | intersect: 686246119.429156
[2026-03-08 14:41:01] 2026-03-08 13:40:23,482 | INFO     | chi2: 2.339417660910974
[2026-03-08 14:41:01] 2026-03-08 13:40:23,482 | INFO     | sum of square deviations: 3081657780.0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,484 | INFO     | sum of deviations: 13206022492.000002
[2026-03-08 14:41:01] 2026-03-08 13:40:23,484 | INFO     | mean x: 1772970333.0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,484 | INFO     | mean y: 2492861.8372093025
[2026-03-08 14:41:01] 2026-03-08 13:40:23,485 | INFO     | intersect: -7595328754.56782
[2026-03-08 14:41:01] 2026-03-08 13:40:23,485 | INFO     | chi2: 1.568877616784385
[2026-03-08 14:41:01] 2026-03-08 13:40:23,485 | INFO     | current chi2=1.568877616784385 (change=32.93725857513357 %)
[2026-03-08 14:41:01] 2026-03-08 13:40:23,485 | INFO     | sum of square deviations: 2871616632.5
[2026-03-08 14:41:01] 2026-03-08 13:40:23,487 | INFO     | sum of deviations: 12908255139.999989
[2026-03-08 14:41:01] 2026-03-08 13:40:23,487 | INFO     | mean x: 1772970180.5
[2026-03-08 14:41:01] 2026-03-08 13:40:23,487 | INFO     | mean y: 2492645.6285714284
[2026-03-08 14:41:01] 2026-03-08 13:40:23,487 | INFO     | intersect: -7967217233.639524
[2026-03-08 14:41:01] 2026-03-08 13:40:23,488 | INFO     | chi2: 1.5696803737298526
[2026-03-08 14:41:01] 2026-03-08 13:40:23,488 | INFO     | current chi2=1.5696803737298526 (change=-0.051167595029685084 %)
[2026-03-08 14:41:01] 2026-03-08 13:40:23,488 | INFO     | right removable region: 209
[2026-03-08 14:41:01] 2026-03-08 13:40:23,488 | INFO     | sum of square deviations: 3081657780.0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,490 | INFO     | sum of deviations: -33677337500.000004
[2026-03-08 14:41:01] 2026-03-08 13:40:23,490 | INFO     | mean x: 1772970638.0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,490 | INFO     | mean y: 2505222.6558139534
[2026-03-08 14:41:01] 2026-03-08 13:40:23,490 | INFO     | intersect: 19378092914.78311
[2026-03-08 14:41:01] 2026-03-08 13:40:23,491 | INFO     | chi2: 0.9069283219637423
[2026-03-08 14:41:01] 2026-03-08 13:40:23,491 | INFO     | current chi2=0.9069283219637423 (change=61.23273167004379 %)
[2026-03-08 14:41:01] 2026-03-08 13:40:23,491 | INFO     | sum of square deviations: 2871616632.5
[2026-03-08 14:41:01] 2026-03-08 13:40:23,493 | INFO     | sum of deviations: -28616401282.5
[2026-03-08 14:41:01] 2026-03-08 13:40:23,493 | INFO     | mean x: 1772970790.5
[2026-03-08 14:41:01] 2026-03-08 13:40:23,493 | INFO     | mean y: 2501517.719047619
[2026-03-08 14:41:01] 2026-03-08 13:40:23,493 | INFO     | intersect: 17670613280.579594
[2026-03-08 14:41:01] 2026-03-08 13:40:23,494 | INFO     | chi2: 0.8873336491974712
[2026-03-08 14:41:01] 2026-03-08 13:40:23,494 | INFO     | current chi2=0.8873336491974712 (change=2.1605536283003524 %)
[2026-03-08 14:41:01] 2026-03-08 13:40:23,494 | INFO     | left removable region: 20
[2026-03-08 14:41:01] 2026-03-08 13:40:23,494 | INFO     | sum of square deviations: 2093397390.0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,496 | INFO     | sum of deviations: 1654109367.0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,496 | INFO     | mean x: 1772970760.0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,496 | INFO     | mean y: 2499125.0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,496 | INFO     | intersect: -1398423392.407509
[2026-03-08 14:41:01] 2026-03-08 13:40:23,496 | INFO     | chi2: 0.0003867226018063135
[2026-03-08 14:41:01] 2026-03-08 13:40:23,496 | INFO     | current memory leak: 0.79 B/s (using 189 data points, chi2=0.00)
[2026-03-08 14:41:01] 2026-03-08 13:40:23,497 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-08 14:41:01] 2026-03-08 13:40:23,497 | INFO     | ..............................
[2026-03-08 14:41:01] 2026-03-08 13:40:23,497 | INFO     | . Timing measurements:
[2026-03-08 14:41:01] 2026-03-08 13:40:23,497 | INFO     | . get job = 0 s
[2026-03-08 14:41:01] 2026-03-08 13:40:23,498 | INFO     | . initial setup = 9 s
[2026-03-08 14:41:01] 2026-03-08 13:40:23,498 | INFO     | . payload setup = 9 s
[2026-03-08 14:41:01] 2026-03-08 13:40:23,498 | INFO     | . stage-in = 0 s
[2026-03-08 14:41:01] 2026-03-08 13:40:23,498 | INFO     | . payload execution = 13417 s
[2026-03-08 14:41:01] 2026-03-08 13:40:23,498 | INFO     | . stage-out = 3 s
[2026-03-08 14:41:01] 2026-03-08 13:40:23,498 | INFO     | . log creation = 1 s
[2026-03-08 14:41:01] 2026-03-08 13:40:23,498 | INFO     | ..............................
[2026-03-08 14:41:01] 2026-03-08 13:40:23,719 | INFO     | 
[2026-03-08 14:41:01] 2026-03-08 13:40:23,719 | INFO     | job summary report
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | --------------------------------------------------
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | PanDA job id: 7045512181
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | task id: 48966988
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | errors: (none)
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | pilot state: finished 
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | transexitcode: 0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | exeerrorcode: 0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | exeerrordiag: 
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | exitcode: 0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | exitmsg: OK
[2026-03-08 14:41:01] 2026-03-08 13:40:23,720 | INFO     | cpuconsumptiontime: 62498 s
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | nevents: 400
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | neventsw: 0
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | pid: 8049
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | pgrp: 8049
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | corecount: 8
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | event service: False
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | sizes: {0: 2295357, 1: 2295874, 12: 2295874, 13430: 2326215, 13431: 2326214, 13435: 2335590}
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | --------------------------------------------------
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | 
[2026-03-08 14:41:01] 2026-03-08 13:40:23,721 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-08 14:41:01] 2026-03-08 13:40:24,322 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,322 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,322 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,322 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,322 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,322 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,322 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 14:41:01] 2026-03-08 13:40:24,323 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,324 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 14:41:01] 2026-03-08 13:40:24,324 | INFO     | job 7045512181 has completed (purged errors)
[2026-03-08 14:41:01] 2026-03-08 13:40:24,324 | INFO     | overall cleanup function is called
[2026-03-08 14:41:01] 2026-03-08 13:40:25,332 | INFO     | --- collectZombieJob: --- 10, [8049]
[2026-03-08 14:41:01] 2026-03-08 13:40:25,333 | INFO     | zombie collector waiting for pid 8049
[2026-03-08 14:41:01] 2026-03-08 13:40:25,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 14:41:01] 2026-03-08 13:40:25,333 | INFO     | collected zombie processes
[2026-03-08 14:41:01] 2026-03-08 13:40:25,333 | INFO     | will attempt to kill all subprocesses of pid=8049
[2026-03-08 14:41:01] 2026-03-08 13:40:25,413 | INFO     | process IDs to be killed: [8049] (in reverse order)
[2026-03-08 14:41:01] 2026-03-08 13:40:26,468 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 14:41:01] 2026-03-08 13:40:26,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 14:41:01] 2026-03-08 13:40:26,470 | INFO     | did not find any defunct processes belonging to 8049
[2026-03-08 14:41:01] 2026-03-08 13:40:26,472 | INFO     | did not find any defunct processes belonging to 8049
[2026-03-08 14:41:01] 2026-03-08 13:40:26,472 | INFO     | ready for new job
[2026-03-08 14:41:01] 2026-03-08 13:40:26,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 14:41:01] 2026-03-08 13:40:26,474 | INFO     | **************************************
[2026-03-08 14:41:01] 2026-03-08 13:40:26,474 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 14:41:01] 2026-03-08 13:40:26,474 | INFO     | **************************************
[2026-03-08 14:41:01] 2026-03-08 13:40:26,474 | INFO     | 
[2026-03-08 14:41:01] 2026-03-08 13:40:26,475 | INFO     | pilot is running in a VM
[2026-03-08 14:41:01] 2026-03-08 13:40:26,475 | INFO     | architecture information:
[2026-03-08 14:41:01] 2026-03-08 13:40:26,495 | INFO     | executing command: cat /etc/os-release
[2026-03-08 14:41:01] 2026-03-08 13:40:26,811 | INFO     | cat /etc/os-release:
[2026-03-08 14:41:01] NAME="CentOS Linux"
[2026-03-08 14:41:01] VERSION="7 (Core)"
[2026-03-08 14:41:01] ID="centos"
[2026-03-08 14:41:01] ID_LIKE="rhel fedora"
[2026-03-08 14:41:01] VERSION_ID="7"
[2026-03-08 14:41:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 14:41:01] ANSI_COLOR="0;31"
[2026-03-08 14:41:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 14:41:01] HOME_URL="https://www.centos.org/"
[2026-03-08 14:41:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 14:41:01] 
[2026-03-08 14:41:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 14:41:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 14:41:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 14:41:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 14:41:01] 
[2026-03-08 14:41:01] 2026-03-08 13:40:26,811 | INFO     | **************************************
[2026-03-08 14:41:01] 2026-03-08 13:40:27,314 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-08 14:41:01] 2026-03-08 13:40:27,507 | INFO     | sufficient remaining disk space (496417898496 B)
[2026-03-08 14:41:01] 2026-03-08 13:40:27,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 14:41:01] 2026-03-08 13:40:27,508 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 14:41:01] 2026-03-08 13:40:27,508 | INFO     | update_server=False
[2026-03-08 14:41:01] 2026-03-08 13:40:27,508 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 14:41:01] 2026-03-08 13:40:27,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 14:41:01] 2026-03-08 13:40:27,512 | INFO     | aborting loop
[2026-03-08 14:41:01] 2026-03-08 13:40:27,732 | INFO     | all payload control threads have been joined
[2026-03-08 14:41:01] 2026-03-08 13:40:28,313 | INFO     | all data control threads have been joined
[2026-03-08 14:41:01] 2026-03-08 13:40:28,513 | INFO     | [job] retrieve thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:28,517 | INFO     | [job] job monitor thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:28,546 | INFO     | [data] copytool_in thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:28,577 | INFO     | all job control threads have been joined
[2026-03-08 14:41:01] 2026-03-08 13:40:28,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 14:41:01] 2026-03-08 13:40:28,737 | INFO     | [payload] control thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:28,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 14:41:01] 2026-03-08 13:40:28,889 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:28,965 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:29,046 | INFO     | [payload] failed_post thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:29,319 | INFO     | [data] control thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:29,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 14:41:01] 2026-03-08 13:40:29,583 | INFO     | [job] control thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:29,600 | INFO     | [job] validate thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:29,640 | INFO     | [job] queue monitor thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:29,672 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:29,688 | INFO     | [payload] validate_post thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:29,806 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:30,873 | INFO     | [data] copytool_out thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:33,484 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 14:41:01] 2026-03-08 13:40:39,069 | INFO     | [monitor] cgroup control has ended
[2026-03-08 14:41:01] 2026-03-08 13:40:39,275 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104594433856)>', '<ExcThread(monitor, started 140104131647232)>']
[2026-03-08 14:41:01] 2026-03-08 13:40:44,301 | INFO     | all workflow threads have been joined
[2026-03-08 14:41:01] 2026-03-08 13:40:44,302 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 14:41:01] 2026-03-08 13:40:44,302 | INFO     | traces error code: 0
[2026-03-08 14:41:01] 2026-03-08 13:40:44,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 14:41:01] 2026-03-08 13:40:56,097 | INFO     | PID=3592 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-08 14:41:01] 2026-03-08 13:40:56,097 | INFO     | .. there are 2 such processes running
[2026-03-08 14:41:01] 2026-03-08 13:40:56,098 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 14:41:01] 2026-03-08 13:40:56,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 14:41:01] 2026-03-08 13:40:56,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 14:41:01] 2026-03-08 13:40:56,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 14:41:01] 2026-03-08 13:40:56,098 | CRITICAL | thread 'MainThread' is not alive
[2026-03-08 14:41:01] 2026-03-08 13:40:56,098 | INFO     | [monitor] control thread has ended
[2026-03-08 14:41:01] 2026-03-08 13:40:56,487 [wrapper] ==== pilot stdout END ====
[2026-03-08 14:41:01] 2026-03-08 13:40:56,552 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 14:41:01] 2026-03-08 13:40:56,664 [wrapper] pilotpid: 3592
[2026-03-08 14:41:01] 2026-03-08 13:40:56,782 [wrapper] Pilot exit status: 0
[2026-03-08 14:41:01] 2026-03-08 13:40:57,307 [wrapper] pandaids: 7045512181
[2026-03-08 14:41:01] 2026-03-08 13:40:58,130 [wrapper] cleanup supervisor_pilot 30387 3593
[2026-03-08 14:41:01] 2026-03-08 13:40:58,250 [wrapper] Test setup, not cleaning
[2026-03-08 14:41:01] 2026-03-08 13:40:58,348 [wrapper] apfmon messages muted
[2026-03-08 14:41:01] 2026-03-08 13:40:58,464 [wrapper] ==== wrapper stdout END ====
[2026-03-08 14:41:01] 2026-03-08 13:40:58,576 [wrapper] ==== wrapper stderr END ====
[2026-03-08 14:41:01]  *** Error codes and diagnostics ***
[2026-03-08 14:41:01]     "exeErrorCode": 0,
[2026-03-08 14:41:01]     "exeErrorDiag": "",
[2026-03-08 14:41:01]     "pilotErrorCode": 0,
[2026-03-08 14:41:01]     "pilotErrorDiag": "",
[2026-03-08 14:41:01]  *** Listing of results directory ***
[2026-03-08 14:41:01] total 407508
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc    584627 Mar  7 22:34 pilot3.tar.gz
[2026-03-08 14:41:01] -rwx------. 1 boinc boinc     36322 Mar  7 22:35 runpilot2-wrapper.sh
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc      5111 Mar  7 22:35 queuedata.json
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc       100 Mar  8 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 14:41:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 10:53 run_atlas
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc       105 Mar  8 10:53 job.xml
[2026-03-08 14:41:01] -rw-r--r--. 2 boinc boinc 210965049 Mar  8 10:53 EVNT.48966985._000601.pool.root.1
[2026-03-08 14:41:01] -rw-r--r--. 2 boinc boinc     15845 Mar  8 10:53 start_atlas.sh
[2026-03-08 14:41:01] drwxrwx--x. 2 boinc boinc        68 Mar  8 10:53 shared
[2026-03-08 14:41:01] -rw-r--r--. 2 boinc boinc    597966 Mar  8 10:53 input.tar.gz
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc      6390 Mar  8 10:53 init_data.xml
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc         0 Mar  8 10:53 boinc_lockfile
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc      2592 Mar  8 10:53 pandaJob.out
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc    999169 Mar  8 10:56 agis_schedconf.cvmfs.json
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc       415 Mar  8 10:56 workernode_map.json
[2026-03-08 14:41:01] drwx------. 5 boinc boinc      4096 Mar  8 10:56 pilot3
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc 197728245 Mar  8 14:38 HITS.48966988._015338.pool.root.1
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc       531 Mar  8 14:39 boinc_task_state.xml
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc      1021 Mar  8 14:40 memory_monitor_summary.json
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc   1521291 Mar  8 14:40 agis_ddmendpoints.agis.ALL.json
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc        95 Mar  8 14:40 pilot_heartbeat.json
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc    449955 Mar  8 14:40 log.48966988._015338.job.log.tgz.1
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc      6316 Mar  8 14:40 heartbeat.json
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc      8192 Mar  8 14:40 boinc_mmap_file
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc        28 Mar  8 14:40 wrapper_checkpoint.txt
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc       889 Mar  8 14:40 pilotlog.txt
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc   1890118 Mar  8 14:40 log.48966988._015338.job.log.1
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc       357 Mar  8 14:41 output.list
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc       620 Mar  8 14:41 runtime_log
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc   2355200 Mar  8 14:41 result.tar.gz
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc      8816 Mar  8 14:41 runtime_log.err
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc       655 Mar  8 14:41 QTEODmiTEJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmfmULDm80wy3n.diag
[2026-03-08 14:41:01] -rw-r--r--. 1 boinc boinc     20656 Mar  8 14:41 stderr.txt
[2026-03-08 14:41:01] HITS file was successfully produced:
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc 197728245 Mar  8 14:38 shared/HITS.pool.root.1
[2026-03-08 14:41:01]  *** Contents of shared directory: ***
[2026-03-08 14:41:01] total 402020
[2026-03-08 14:41:01] -rw-r--r--. 2 boinc boinc 210965049 Mar  8 10:53 ATLAS.root_0
[2026-03-08 14:41:01] -rw-r--r--. 2 boinc boinc     15845 Mar  8 10:53 start_atlas.sh
[2026-03-08 14:41:01] -rw-r--r--. 2 boinc boinc    597966 Mar  8 10:53 input.tar.gz
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc 197728245 Mar  8 14:38 HITS.pool.root.1
[2026-03-08 14:41:01] -rw-------. 1 boinc boinc   2355200 Mar  8 14:41 result.tar.gz
14:41:02 (31980): run_atlas exited; CPU time 62618.240030
14:41:02 (31980): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN