Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:50 (3523258): wrapper (7.7.26015): starting
00:03:50 (3523258): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 00:03:50] Arguments: --nthreads 8
[2026-03-08 00:03:50] Threads: 8
[2026-03-08 00:03:50] Checking for CVMFS
[2026-03-08 00:03:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 00:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 00:03:52] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 00:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 00:03:52] 2.13.3.0 8492 105244 407588 157027 0 345 36305145 39288832 16372 16776704 0 194177592 99.478 303663029 29269 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-08 00:03:52] CVMFS is ok
[2026-03-08 00:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 00:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 00:03:52] Further information can be found at the LHC@home message board.
[2026-03-08 00:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 00:03:52] Checking for apptainer binary...
[2026-03-08 00:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 00:03:52] Running /usr/bin/apptainer --version
[2026-03-08 00:03:52] apptainer version 1.4.5-2.el9
[2026-03-08 00:03:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 00:03:52] c-211-22.aglt2.org
[2026-03-08 00:03:52] apptainer works
[2026-03-08 00:03:52] Set ATHENA_PROC_NUMBER=8
[2026-03-08 00:03:52] Set ATHENA_CORE_NUMBER=8
[2026-03-08 00:03:52] Starting ATLAS job with PandaID=7045696568
[2026-03-08 00:03:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 00:02:55]  *** The last 200 lines of the pilot log: ***
[2026-03-11 00:02:55] 2026-03-10 12:04:03,282 | INFO     | mean x: 1773045362.2545512
[2026-03-11 00:02:55] 2026-03-10 12:04:03,282 | INFO     | mean y: 2540543.337241592
[2026-03-11 00:02:55] 2026-03-10 12:04:03,282 | INFO     | intersect: -1283353955.4454787
[2026-03-11 00:02:55] 2026-03-10 12:04:03,320 | INFO     | chi2: 14.10450217621589
[2026-03-11 00:02:55] 2026-03-10 12:04:03,337 | INFO     | sum of square deviations: 10507494526038.115
[2026-03-11 00:02:55] 2026-03-10 12:04:04,016 | INFO     | time since job start (197854s) is within the limit (349056.0s)
[2026-03-11 00:02:55] 2026-03-10 12:04:04,559 | INFO     | monitor loop #6576: job 0:7045696568 is in state 'finished'
[2026-03-11 00:02:55] 2026-03-10 12:04:04,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 00:02:55] 2026-03-10 12:04:06,680 | INFO     | time since job start (197856s) is within the limit (349056.0s)
[2026-03-11 00:02:55] 2026-03-10 12:04:07,378 | INFO     | monitor loop #6577: job 0:7045696568 is in state 'finished'
[2026-03-11 00:02:55] 2026-03-10 12:04:07,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 00:02:55] 2026-03-10 12:04:08,685 | INFO     | sum of deviations: 8702634945921.869
[2026-03-11 00:02:55] 2026-03-10 12:04:08,686 | INFO     | mean x: 1773045209.7564895
[2026-03-11 00:02:55] 2026-03-10 12:04:08,686 | INFO     | mean y: 2543815.6242274414
[2026-03-11 00:02:55] 2026-03-10 12:04:08,686 | INFO     | intersect: -1465947570.6800382
[2026-03-11 00:02:55] 2026-03-10 12:04:08,701 | INFO     | chi2: 10.592692252100516
[2026-03-11 00:02:55] 2026-03-10 12:04:08,702 | INFO     | current chi2=10.592692252100516 (change=24.898503188841797 %)
[2026-03-11 00:02:55] 2026-03-10 12:04:08,702 | INFO     | right removable region: 3235
[2026-03-11 00:02:55] 2026-03-10 12:04:08,758 | INFO     | sum of square deviations: 10507492243358.633
[2026-03-11 00:02:55] 2026-03-10 12:04:10,231 | INFO     | monitor loop #6578: job 0:7045696568 is in state 'finished'
[2026-03-11 00:02:55] 2026-03-10 12:04:10,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 00:02:55] 2026-03-10 12:04:12,974 | INFO     | monitor loop #6579: job 0:7045696568 is in state 'finished'
[2026-03-11 00:02:55] 2026-03-10 12:04:12,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 00:02:55] 2026-03-10 12:04:13,396 | INFO     | sum of deviations: 6540886625543.589
[2026-03-11 00:02:55] 2026-03-10 12:04:13,396 | INFO     | mean x: 1773045514.7561805
[2026-03-11 00:02:55] 2026-03-10 12:04:13,396 | INFO     | mean y: 2544028.7700865264
[2026-03-11 00:02:55] 2026-03-10 12:04:13,401 | INFO     | intersect: -1101172198.218226
[2026-03-11 00:02:55] 2026-03-10 12:04:13,409 | INFO     | chi2: 10.118817424128348
[2026-03-11 00:02:55] 2026-03-10 12:04:13,409 | INFO     | current chi2=10.118817424128348 (change=28.258244795115946 %)
[2026-03-11 00:02:55] 2026-03-10 12:04:13,418 | INFO     | sum of square deviations: 10458859944918.244
[2026-03-11 00:02:55] 2026-03-10 12:04:15,746 | INFO     | monitor loop #6580: job 0:7045696568 is in state 'finished'
[2026-03-11 00:02:55] 2026-03-10 12:04:15,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 00:02:55] 2026-03-10 12:04:19,159 | INFO     | sum of deviations: 5743066711663.542
[2026-03-11 00:02:55] 2026-03-10 12:04:19,160 | INFO     | mean x: 1773045667.257815
[2026-03-11 00:02:55] 2026-03-10 12:04:19,160 | INFO     | mean y: 2546530.414732281
[2026-03-11 00:02:55] 2026-03-10 12:04:19,160 | INFO     | intersect: -971050936.566859
[2026-03-11 00:02:55] 2026-03-10 12:04:19,211 | INFO     | monitor loop #6581: job 0:7045696568 is in state 'finished'
[2026-03-11 00:02:55] 2026-03-10 12:04:19,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 00:02:55] 2026-03-10 12:04:19,231 | INFO     | chi2: 8.130083367300156
[2026-03-11 00:02:55] 2026-03-10 12:04:19,232 | INFO     | current chi2=8.130083367300156 (change=19.653818954041515 %)
[2026-03-11 00:02:55] 2026-03-10 12:04:19,232 | INFO     | left removable region: 20
[2026-03-11 00:02:55] 2026-03-10 12:04:19,241 | INFO     | sum of square deviations: 10304249058691.47
[2026-03-11 00:02:55] 2026-03-10 12:04:22,528 | INFO     | monitor loop #6582: job 0:7045696568 is in state 'finished'
[2026-03-11 00:02:55] 2026-03-10 12:04:22,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 00:02:55] 2026-03-10 12:04:25,736 | INFO     | monitor loop #6583: job 0:7045696568 is in state 'finished'
[2026-03-11 00:02:55] 2026-03-10 12:04:25,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 00:02:55] 2026-03-10 12:04:27,620 | INFO     | sum of deviations: 6124107251906.207
[2026-03-11 00:02:55] 2026-03-10 12:04:27,620 | INFO     | mean x: 1773045789.2618973
[2026-03-11 00:02:55] 2026-03-10 12:04:27,620 | INFO     | mean y: 2553241.099533437
[2026-03-11 00:02:55] 2026-03-10 12:04:27,621 | INFO     | intersect: -1051218121.969542
[2026-03-11 00:02:55] 2026-03-10 12:04:27,847 | INFO     | chi2: 2.729420838194185
[2026-03-11 00:02:55] 2026-03-10 12:04:27,847 | INFO     | current memory leak: 0.59 B/s (using 3215 data points, chi2=2.73)
[2026-03-11 00:02:55] 2026-03-10 12:04:28,215 | INFO     | could have reported an average CPU frequency of 2899 MHz (112 samples)
[2026-03-11 00:02:55] 2026-03-10 12:04:28,215 | INFO     | ..............................
[2026-03-11 00:02:55] 2026-03-10 12:04:28,216 | INFO     | . Timing measurements:
[2026-03-11 00:02:55] 2026-03-10 12:04:28,216 | INFO     | . get job = 0 s
[2026-03-11 00:02:55] 2026-03-10 12:04:28,216 | INFO     | . initial setup = 57 s
[2026-03-11 00:02:55] 2026-03-10 12:04:28,216 | INFO     | . payload setup = 75 s
[2026-03-11 00:02:55] 2026-03-10 12:04:28,216 | INFO     | . stage-in = 0 s
[2026-03-11 00:02:55] 2026-03-10 12:04:28,216 | INFO     | . payload execution = 197704 s
[2026-03-11 00:02:55] 2026-03-10 12:04:28,326 | INFO     | . stage-out = 25 s
[2026-03-11 00:02:55] 2026-03-10 12:04:28,326 | INFO     | . log creation = 4 s
[2026-03-11 00:02:55] 2026-03-10 12:04:28,326 | INFO     | ..............................
[2026-03-11 00:02:55] 2026-03-10 12:04:34,916 | INFO     | 
[2026-03-11 00:02:55] 2026-03-10 12:04:34,916 | INFO     | job summary report
[2026-03-11 00:02:55] 2026-03-10 12:04:34,916 | INFO     | --------------------------------------------------
[2026-03-11 00:02:55] 2026-03-10 12:04:34,917 | INFO     | PanDA job id: 7045696568
[2026-03-11 00:02:55] 2026-03-10 12:04:34,917 | INFO     | task id: 48997968
[2026-03-11 00:02:55] 2026-03-10 12:04:34,917 | INFO     | errors: (none)
[2026-03-11 00:02:55] 2026-03-10 12:04:34,917 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 00:02:55] 2026-03-10 12:04:34,917 | INFO     | pilot state: finished 
[2026-03-11 00:02:55] 2026-03-10 12:04:34,917 | INFO     | transexitcode: 0
[2026-03-11 00:02:55] 2026-03-10 12:04:34,917 | INFO     | exeerrorcode: 0
[2026-03-11 00:02:55] 2026-03-10 12:04:34,918 | INFO     | exeerrordiag: 
[2026-03-11 00:02:55] 2026-03-10 12:04:34,918 | INFO     | exitcode: 0
[2026-03-11 00:02:55] 2026-03-10 12:04:34,918 | INFO     | exitmsg: OK
[2026-03-11 00:02:55] 2026-03-10 12:04:34,918 | INFO     | cpuconsumptiontime: 112396 s
[2026-03-11 00:02:55] 2026-03-10 12:04:34,918 | INFO     | nevents: 400
[2026-03-11 00:02:55] 2026-03-10 12:04:34,918 | INFO     | neventsw: 0
[2026-03-11 00:02:55] 2026-03-10 12:04:34,918 | INFO     | pid: 3616633
[2026-03-11 00:02:55] 2026-03-10 12:04:34,919 | INFO     | pgrp: 3616633
[2026-03-11 00:02:55] 2026-03-10 12:04:34,919 | INFO     | corecount: 8
[2026-03-11 00:02:55] 2026-03-10 12:04:34,919 | INFO     | event service: False
[2026-03-11 00:02:55] 2026-03-10 12:04:34,919 | INFO     | sizes: {0: 2295375, 1: 2295403, 2: 2295403, 3: 2295864, 15: 2295864, 197790: 2398018, 197791: 2398145, 197819: 2402515, 197826: 2402571, 197869: 2402765}
[2026-03-11 00:02:55] 2026-03-10 12:04:34,919 | INFO     | --------------------------------------------------
[2026-03-11 00:02:55] 2026-03-10 12:04:34,919 | INFO     | 
[2026-03-11 00:02:55] 2026-03-10 12:04:34,960 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-11 00:02:55] 2026-03-10 12:04:35,136 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,136 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,137 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,137 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,139 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 00:02:55] 2026-03-10 12:04:35,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,139 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 00:02:55] 2026-03-10 12:04:35,176 | INFO     | job 7045696568 has completed (purged errors)
[2026-03-11 00:02:55] 2026-03-10 12:04:35,176 | INFO     | overall cleanup function is called
[2026-03-11 00:02:55] 2026-03-10 12:04:36,306 | INFO     | --- collectZombieJob: --- 10, [3616633]
[2026-03-11 00:02:55] 2026-03-10 12:04:36,306 | INFO     | zombie collector waiting for pid 3616633
[2026-03-11 00:02:55] 2026-03-10 12:04:36,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 00:02:55] 2026-03-10 12:04:36,306 | INFO     | collected zombie processes
[2026-03-11 00:02:55] 2026-03-10 12:04:36,306 | INFO     | will attempt to kill all subprocesses of pid=3616633
[2026-03-11 00:02:55] 2026-03-10 12:04:36,959 | INFO     | PID=3561648 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 00:02:55] 2026-03-10 12:04:36,959 | INFO     | .. there are 39 such processes running
[2026-03-11 00:02:55] 2026-03-10 12:04:48,870 | INFO     | process IDs to be killed: [3616633] (in reverse order)
[2026-03-11 00:02:55] 2026-03-10 12:04:49,429 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 00:02:55] 2026-03-10 12:04:49,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 00:02:55] 2026-03-10 12:04:49,716 | INFO     | did not find any defunct processes belonging to 3616633
[2026-03-11 00:02:55] 2026-03-10 12:04:50,413 | INFO     | did not find any defunct processes belonging to 3616633
[2026-03-11 00:02:55] 2026-03-10 12:04:50,414 | INFO     | ready for new job
[2026-03-11 00:02:55] 2026-03-10 12:04:50,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 00:02:55] 2026-03-10 12:04:50,707 | INFO     | **************************************
[2026-03-11 00:02:55] 2026-03-10 12:04:50,707 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 00:02:55] 2026-03-10 12:04:50,707 | INFO     | **************************************
[2026-03-11 00:02:55] 2026-03-10 12:04:50,707 | INFO     | 
[2026-03-11 00:02:55] 2026-03-10 12:04:50,914 | INFO     | architecture information:
[2026-03-11 00:02:55] 2026-03-10 12:04:50,964 | INFO     | executing command: cat /etc/os-release
[2026-03-11 00:02:55] 2026-03-10 12:04:51,407 | INFO     | cat /etc/os-release:
[2026-03-11 00:02:55] NAME="CentOS Linux"
[2026-03-11 00:02:55] VERSION="7 (Core)"
[2026-03-11 00:02:55] ID="centos"
[2026-03-11 00:02:55] ID_LIKE="rhel fedora"
[2026-03-11 00:02:55] VERSION_ID="7"
[2026-03-11 00:02:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 00:02:55] ANSI_COLOR="0;31"
[2026-03-11 00:02:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 00:02:55] HOME_URL="https://www.centos.org/"
[2026-03-11 00:02:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 00:02:55] 
[2026-03-11 00:02:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 00:02:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 00:02:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 00:02:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 00:02:55] 
[2026-03-11 00:02:55] 2026-03-10 12:04:51,408 | INFO     | **************************************
[2026-03-11 00:02:55] 2026-03-10 12:04:51,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-11 00:02:55] 2026-03-10 12:04:52,257 | INFO     | sufficient remaining disk space (50701795328 B)
[2026-03-11 00:02:55] 2026-03-10 12:04:52,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 00:02:55] 2026-03-10 12:04:52,258 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 00:02:55] 2026-03-10 12:04:52,258 | INFO     | update_server=False
[2026-03-11 00:02:55] 2026-03-10 12:04:52,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 00:02:55] 2026-03-10 12:04:52,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 00:02:55] 2026-03-10 12:04:52,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 00:02:55] 2026-03-10 12:04:52,283 | INFO     | aborting loop
[2026-03-11 00:02:55] 2026-03-10 12:04:52,502 | INFO     | all data control threads have been joined
[2026-03-11 00:02:55] 2026-03-10 12:04:52,788 | INFO     | all job control threads have been joined
[2026-03-11 00:02:55] 2026-03-10 12:04:52,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 00:02:55] 2026-03-10 12:04:53,264 | INFO     | [job] retrieve thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,289 | INFO     | [job] job monitor thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,317 | INFO     | all payload control threads have been joined
[2026-03-11 00:02:55] 2026-03-10 12:04:53,327 | INFO     | [payload] validate_post thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,336 | INFO     | [payload] failed_post thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,398 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,417 | INFO     | [data] copytool_in thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,418 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,508 | INFO     | [data] control thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,794 | INFO     | [job] control thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,848 | INFO     | [job] queue monitor thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:53,947 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:54,269 | INFO     | [job] validate thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:54,277 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:54,298 | INFO     | [data] copytool_out thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:54,323 | INFO     | [payload] control thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:04:54,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 00:02:55] 2026-03-10 12:04:58,994 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 00:02:55] 2026-03-10 12:05:08,343 | INFO     | [monitor] cgroup control has ended
[2026-03-11 00:02:55] 2026-03-10 12:05:08,404 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051818587968)>', '<ExcThread(monitor, started 140051459581696)>']
[2026-03-11 00:02:55] 2026-03-10 12:05:13,453 | INFO     | all workflow threads have been joined
[2026-03-11 00:02:55] 2026-03-10 12:05:13,480 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 00:02:55] 2026-03-10 12:05:13,480 | INFO     | traces error code: 0
[2026-03-11 00:02:55] 2026-03-10 12:05:13,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 00:02:55] 2026-03-10 12:05:21,999 | INFO     | PID=3561648 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 00:02:55] 2026-03-10 12:05:21,999 | INFO     | .. there are 39 such processes running
[2026-03-11 00:02:55] 2026-03-10 12:05:22,000 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 00:02:55] 2026-03-10 12:05:22,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 00:02:55] 2026-03-10 12:05:22,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 00:02:55] 2026-03-10 12:05:22,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 00:02:55] 2026-03-10 12:05:22,278 | INFO     | [monitor] control thread has ended
[2026-03-11 00:02:55] 2026-03-10 12:05:30,714 [wrapper] ==== pilot stdout END ====
[2026-03-11 00:02:55] 2026-03-10 12:05:30,745 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 00:02:55] 2026-03-10 12:05:30,764 [wrapper] pilotpid: 3561648
[2026-03-11 00:02:55] 2026-03-10 12:05:30,809 [wrapper] Pilot exit status: 0
[2026-03-11 00:02:55] 2026-03-10 12:05:30,998 [wrapper] pandaids: 7045696568
[2026-03-11 00:02:55] 2026-03-10 12:05:32,230 [wrapper] cleanup supervisor_pilot 1765278 3561649
[2026-03-11 00:02:55] 2026-03-10 12:05:32,281 [wrapper] Test setup, not cleaning
[2026-03-11 00:02:55] 2026-03-10 12:05:32,424 [wrapper] apfmon messages muted
[2026-03-11 00:02:55] 2026-03-10 12:05:32,472 [wrapper] ==== wrapper stdout END ====
[2026-03-11 00:02:55] 2026-03-10 12:05:32,531 [wrapper] ==== wrapper stderr END ====
[2026-03-11 00:02:55]  *** Error codes and diagnostics ***
[2026-03-11 00:02:55]     "exeErrorCode": 0,
[2026-03-11 00:02:55]     "exeErrorDiag": "",
[2026-03-11 00:02:55]     "pilotErrorCode": 0,
[2026-03-11 00:02:55]     "pilotErrorDiag": "",
[2026-03-11 00:02:55]  *** Listing of results directory ***
[2026-03-11 00:02:55] total 669832
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas    584627 Mar  7 20:07 pilot3.tar.gz
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas      5111 Mar  7 20:08 queuedata.json
[2026-03-11 00:02:55] -rwx------. 1 boincer umatlas     36322 Mar  7 20:09 runpilot2-wrapper.sh
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas       100 Mar  8 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 00:02:55] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 00:03 run_atlas
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas       105 Mar  8 00:03 job.xml
[2026-03-11 00:02:55] -rw-r--r--. 2 boincer umatlas 358251587 Mar  8 00:03 EVNT.48997965._000009.pool.root.1
[2026-03-11 00:02:55] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 00:03 start_atlas.sh
[2026-03-11 00:02:55] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 00:03 shared
[2026-03-11 00:02:55] -rw-r--r--. 2 boincer umatlas    597950 Mar  8 00:03 input.tar.gz
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas         0 Mar  8 00:03 boinc_lockfile
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas      2564 Mar  8 00:03 pandaJob.out
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas        57 Mar  8 00:03 setup.sh.local
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas    999169 Mar  8 00:05 agis_schedconf.cvmfs.json
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas       434 Mar  8 00:06 workernode_map.json
[2026-03-11 00:02:55] drwx------. 5 boincer umatlas      4096 Mar  8 00:06 pilot3
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas 286248031 Mar 10 07:55 HITS.48997968._000164.pool.root.1
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas       532 Mar 10 07:55 boinc_task_state.xml
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas      1050 Mar 10 08:03 memory_monitor_summary.json
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas   1511578 Mar 10 08:03 agis_ddmendpoints.agis.ALL.json
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas   2139681 Mar 10 08:03 log.48997968._000164.job.log.tgz.1
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas      6390 Mar 10 08:04 heartbeat.json
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas        96 Mar 10 08:05 pilot_heartbeat.json
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas       823 Mar 10 08:05 pilotlog.txt
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas  16599562 Mar 10 08:05 log.48997968._000164.job.log.1
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas       357 Mar 10 08:05 output.list
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas       620 Mar 10 08:05 runtime_log
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas  18759680 Mar 10 08:05 result.tar.gz
[2026-03-11 00:02:55] -rw-------. 1 boincer umatlas       661 Mar 10 08:05 Xe6KDm4oHJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtHVLDmud7Den.diag
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas      9343 Mar 10 08:05 runtime_log.err
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas        29 Mar 11 00:02 wrapper_checkpoint.txt
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas      6528 Mar 11 00:02 init_data.xml
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 00:02 boinc_mmap_file
[2026-03-11 00:02:55] -rw-r--r--. 1 boincer umatlas     21755 Mar 11 00:02 stderr.txt
[2026-03-11 00:02:56] HITS file was successfully produced:
[2026-03-11 00:02:56] -rw-------. 1 boincer umatlas 286248031 Mar 10 07:55 shared/HITS.pool.root.1
[2026-03-11 00:02:56]  *** Contents of shared directory: ***
[2026-03-11 00:02:56] total 648324
[2026-03-11 00:02:56] -rw-r--r--. 2 boincer umatlas 358251587 Mar  8 00:03 ATLAS.root_0
[2026-03-11 00:02:56] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 00:03 start_atlas.sh
[2026-03-11 00:02:56] -rw-r--r--. 2 boincer umatlas    597950 Mar  8 00:03 input.tar.gz
[2026-03-11 00:02:56] -rw-------. 1 boincer umatlas 286248031 Mar 10 07:55 HITS.pool.root.1
[2026-03-11 00:02:56] -rw-------. 1 boincer umatlas  18759680 Mar 10 08:05 result.tar.gz
00:02:57 (3523258): run_atlas exited; CPU time 121616.190577
00:02:57 (3523258): called boinc_finish(0)

</stderr_txt>
]]>

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