Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:56 (2369706): wrapper (7.7.26015): starting
00:03:56 (2369706): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 00:03:56] Arguments: --nthreads 8
[2026-03-08 00:03:56] Threads: 8
[2026-03-08 00:03:56] Checking for CVMFS
[2026-03-08 00:03:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 00:03:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 00:03:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 00:03:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 00:03:58] 2.13.3.0 8980 176488 347160 157027 1 469 24192952 32935937 26090 16776704 0 775615899 99.698 596069928 33128 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-08 00:03:58] CVMFS is ok
[2026-03-08 00:03:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 00:03:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 00:03:58] Further information can be found at the LHC@home message board.
[2026-03-08 00:03:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 00:03:58] Checking for apptainer binary...
[2026-03-08 00:03:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 00:03:58] Running /usr/bin/apptainer --version
[2026-03-08 00:03:58] apptainer version 1.4.5-2.el9
[2026-03-08 00:03:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 00:04:01] c-5-4.aglt2.org
[2026-03-08 00:04:01] apptainer works
[2026-03-08 00:04:01] Set ATHENA_PROC_NUMBER=8
[2026-03-08 00:04:01] Set ATHENA_CORE_NUMBER=8
[2026-03-08 00:04:01] Starting ATLAS job with PandaID=7045696566
[2026-03-08 00:04:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 09:54:35]  *** The last 200 lines of the pilot log: ***
[2026-03-09 09:54:35] 2026-03-09 13:53:35,818 | INFO     | monitor loop #5982: job 0:7045696566 is in state 'finished'
[2026-03-09 09:54:35] 2026-03-09 13:53:35,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 09:54:35] 2026-03-09 13:53:35,860 | INFO     | time since job start (118031s) is within the limit (349056.0s)
[2026-03-09 09:54:35] 2026-03-09 13:53:37,215 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 09:54:35] 2026-03-09 13:53:37,458 | INFO     | job 7045696566 has state=finished
[2026-03-09 09:54:35] 2026-03-09 13:53:37,459 | INFO     | preparing for final server update for job 7045696566 in state='finished'
[2026-03-09 09:54:35] 2026-03-09 13:53:37,892 | INFO     | time since job start (118033s) is within the limit (349056.0s)
[2026-03-09 09:54:35] 2026-03-09 13:53:38,238 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-09 09:54:35] 2026-03-09 13:53:38,240 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7045696566/jobReport.json
[2026-03-09 09:54:35] 2026-03-09 13:53:38,246 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-03-09 09:54:35] 2026-03-09 13:53:38,247 | INFO     | this job has now completed (state=finished)
[2026-03-09 09:54:35] 2026-03-09 13:53:38,247 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 09:54:35] 2026-03-09 13:53:38,247 | INFO     | log transfer has been attempted: DONE
[2026-03-09 09:54:35] 2026-03-09 13:53:38,247 | INFO     | job 7045696566 has finished - writing final server update
[2026-03-09 09:54:35] 2026-03-09 13:53:38,248 | INFO     | total number of processed events: 400 (read)
[2026-03-09 09:54:35] 2026-03-09 13:53:38,266 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7045696566/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 09:54:35] 2026-03-09 13:53:38,267 | INFO     | extracted standard info from prmon json
[2026-03-09 09:54:35] 2026-03-09 13:53:38,267 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 09:54:35] 2026-03-09 13:53:38,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 09:54:35] 2026-03-09 13:53:38,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 09:54:35] 2026-03-09 13:53:38,285 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 09:54:35] 2026-03-09 13:53:38,406 | INFO     | fitting pss+swap vs Time
[2026-03-09 09:54:35] 2026-03-09 13:53:38,413 | INFO     | sum of square deviations: 2239544769879.0396
[2026-03-09 09:54:35] 2026-03-09 13:53:38,437 | INFO     | monitor loop #5983: job 0:7045696566 is in state 'finished'
[2026-03-09 09:54:35] 2026-03-09 13:53:38,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 09:54:35] 2026-03-09 13:53:38,658 | INFO     | sum of deviations: 6010400202788.041
[2026-03-09 09:54:35] 2026-03-09 13:53:38,658 | INFO     | mean x: 1773005428.9399896
[2026-03-09 09:54:35] 2026-03-09 13:53:38,658 | INFO     | mean y: 2486217.914123125
[2026-03-09 09:54:35] 2026-03-09 13:53:38,658 | INFO     | intersect: -4755834460.899893
[2026-03-09 09:54:35] 2026-03-09 13:53:38,663 | INFO     | chi2: 18.36029795176384
[2026-03-09 09:54:35] 2026-03-09 13:53:38,666 | INFO     | sum of square deviations: 2222211250571.95
[2026-03-09 09:54:35] 2026-03-09 13:53:38,853 | INFO     | sum of deviations: 6617165331417.981
[2026-03-09 09:54:35] 2026-03-09 13:53:38,853 | INFO     | mean x: 1773005276.4439833
[2026-03-09 09:54:35] 2026-03-09 13:53:38,853 | INFO     | mean y: 2491556.101659751
[2026-03-09 09:54:35] 2026-03-09 13:53:38,853 | INFO     | intersect: -5277055581.771323
[2026-03-09 09:54:35] 2026-03-09 13:53:38,860 | INFO     | chi2: 14.870330036188799
[2026-03-09 09:54:35] 2026-03-09 13:53:38,860 | INFO     | current chi2=14.870330036188799 (change=19.008231373716715 %)
[2026-03-09 09:54:35] 2026-03-09 13:53:38,861 | INFO     | right removable region: 1927
[2026-03-09 09:54:35] 2026-03-09 13:53:38,867 | INFO     | sum of square deviations: 2222209198770.168
[2026-03-09 09:54:35] 2026-03-09 13:53:39,049 | INFO     | sum of deviations: 5358767251705.029
[2026-03-09 09:54:35] 2026-03-09 13:53:39,049 | INFO     | mean x: 1773005581.4450207
[2026-03-09 09:54:35] 2026-03-09 13:53:39,049 | INFO     | mean y: 2491949.877593361
[2026-03-09 09:54:35] 2026-03-09 13:53:39,049 | INFO     | intersect: -4273039018.222078
[2026-03-09 09:54:35] 2026-03-09 13:53:39,056 | INFO     | chi2: 14.316228357488496
[2026-03-09 09:54:35] 2026-03-09 13:53:39,056 | INFO     | current chi2=14.316228357488496 (change=22.026165397206082 %)
[2026-03-09 09:54:35] 2026-03-09 13:53:39,056 | INFO     | left removable region: 10
[2026-03-09 09:54:35] 2026-03-09 13:53:39,063 | INFO     | sum of square deviations: 2184388785154.142
[2026-03-09 09:54:35] 2026-03-09 13:53:39,259 | INFO     | sum of deviations: 5537382959417.298
[2026-03-09 09:54:35] 2026-03-09 13:53:39,259 | INFO     | mean x: 1773005550.9551382
[2026-03-09 09:54:35] 2026-03-09 13:53:39,259 | INFO     | mean y: 2503297.7824726133
[2026-03-09 09:54:35] 2026-03-09 13:53:39,259 | INFO     | intersect: -4492031187.807491
[2026-03-09 09:54:35] 2026-03-09 13:53:39,262 | INFO     | chi2: 7.300164385529819
[2026-03-09 09:54:35] 2026-03-09 13:53:39,262 | INFO     | current memory leak: 2.53 B/s (using 1917 data points, chi2=7.30)
[2026-03-09 09:54:35] 2026-03-09 13:53:39,268 | INFO     | could have reported an average CPU frequency of 2600 MHz (69 samples)
[2026-03-09 09:54:35] 2026-03-09 13:53:39,268 | INFO     | ..............................
[2026-03-09 09:54:35] 2026-03-09 13:53:39,268 | INFO     | . Timing measurements:
[2026-03-09 09:54:35] 2026-03-09 13:53:39,268 | INFO     | . get job = 0 s
[2026-03-09 09:54:35] 2026-03-09 13:53:39,268 | INFO     | . initial setup = 60 s
[2026-03-09 09:54:35] 2026-03-09 13:53:39,269 | INFO     | . payload setup = 62 s
[2026-03-09 09:54:35] 2026-03-09 13:53:39,269 | INFO     | . stage-in = 1 s
[2026-03-09 09:54:35] 2026-03-09 13:53:39,269 | INFO     | . payload execution = 117927 s
[2026-03-09 09:54:35] 2026-03-09 13:53:39,269 | INFO     | . stage-out = 16 s
[2026-03-09 09:54:35] 2026-03-09 13:53:39,269 | INFO     | . log creation = 10 s
[2026-03-09 09:54:35] 2026-03-09 13:53:39,269 | INFO     | ..............................
[2026-03-09 09:54:35] 2026-03-09 13:53:40,017 | INFO     | time since job start (118036s) is within the limit (349056.0s)
[2026-03-09 09:54:35] 2026-03-09 13:53:40,086 | INFO     | 
[2026-03-09 09:54:35] 2026-03-09 13:53:40,086 | INFO     | job summary report
[2026-03-09 09:54:35] 2026-03-09 13:53:40,087 | INFO     | --------------------------------------------------
[2026-03-09 09:54:35] 2026-03-09 13:53:40,087 | INFO     | PanDA job id: 7045696566
[2026-03-09 09:54:35] 2026-03-09 13:53:40,087 | INFO     | task id: 48997968
[2026-03-09 09:54:35] 2026-03-09 13:53:40,087 | INFO     | errors: (none)
[2026-03-09 09:54:35] 2026-03-09 13:53:40,087 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 09:54:35] 2026-03-09 13:53:40,087 | INFO     | pilot state: finished 
[2026-03-09 09:54:35] 2026-03-09 13:53:40,087 | INFO     | transexitcode: 0
[2026-03-09 09:54:35] 2026-03-09 13:53:40,087 | INFO     | exeerrorcode: 0
[2026-03-09 09:54:35] 2026-03-09 13:53:40,087 | INFO     | exeerrordiag: 
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | exitcode: 0
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | exitmsg: OK
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | cpuconsumptiontime: 74149 s
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | nevents: 400
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | neventsw: 0
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | pid: 2416404
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | pgrp: 2416404
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | corecount: 8
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | event service: False
[2026-03-09 09:54:35] 2026-03-09 13:53:40,088 | INFO     | sizes: {0: 2294718, 1: 2295319, 2: 2295431, 3: 2295804, 4: 2295920, 16: 2295920, 117994: 2372023, 117995: 2372022, 118013: 2376364, 118016: 2376420, 118019: 237661
[2026-03-09 09:54:35] 2026-03-09 13:53:40,089 | INFO     | --------------------------------------------------
[2026-03-09 09:54:35] 2026-03-09 13:53:40,089 | INFO     | 
[2026-03-09 09:54:35] 2026-03-09 13:53:40,089 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-09 09:54:35] 2026-03-09 13:53:40,420 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,420 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,420 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,420 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,430 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 09:54:35] 2026-03-09 13:53:40,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,430 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 09:54:35] 2026-03-09 13:53:40,430 | INFO     | job 7045696566 has completed (purged errors)
[2026-03-09 09:54:35] 2026-03-09 13:53:40,430 | INFO     | overall cleanup function is called
[2026-03-09 09:54:35] 2026-03-09 13:53:41,442 | INFO     | --- collectZombieJob: --- 10, [2416404]
[2026-03-09 09:54:35] 2026-03-09 13:53:41,443 | INFO     | zombie collector waiting for pid 2416404
[2026-03-09 09:54:35] 2026-03-09 13:53:41,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 09:54:35] 2026-03-09 13:53:41,443 | INFO     | collected zombie processes
[2026-03-09 09:54:35] 2026-03-09 13:53:41,443 | INFO     | will attempt to kill all subprocesses of pid=2416404
[2026-03-09 09:54:35] 2026-03-09 13:53:43,998 | INFO     | process IDs to be killed: [2416404] (in reverse order)
[2026-03-09 09:54:35] 2026-03-09 13:53:44,206 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 09:54:35] 2026-03-09 13:53:44,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 09:54:35] 2026-03-09 13:53:44,274 | INFO     | did not find any defunct processes belonging to 2416404
[2026-03-09 09:54:35] 2026-03-09 13:53:44,301 | INFO     | did not find any defunct processes belonging to 2416404
[2026-03-09 09:54:35] 2026-03-09 13:53:44,309 | INFO     | ready for new job
[2026-03-09 09:54:35] 2026-03-09 13:53:44,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 09:54:35] 2026-03-09 13:53:44,315 | INFO     | **************************************
[2026-03-09 09:54:35] 2026-03-09 13:53:44,315 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 09:54:35] 2026-03-09 13:53:44,315 | INFO     | **************************************
[2026-03-09 09:54:35] 2026-03-09 13:53:44,319 | INFO     | 
[2026-03-09 09:54:35] 2026-03-09 13:53:44,321 | INFO     | architecture information:
[2026-03-09 09:54:35] 2026-03-09 13:53:44,323 | INFO     | executing command: cat /etc/os-release
[2026-03-09 09:54:35] 2026-03-09 13:53:44,395 | INFO     | cat /etc/os-release:
[2026-03-09 09:54:35] NAME="CentOS Linux"
[2026-03-09 09:54:35] VERSION="7 (Core)"
[2026-03-09 09:54:35] ID="centos"
[2026-03-09 09:54:35] ID_LIKE="rhel fedora"
[2026-03-09 09:54:35] VERSION_ID="7"
[2026-03-09 09:54:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 09:54:35] ANSI_COLOR="0;31"
[2026-03-09 09:54:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 09:54:35] HOME_URL="https://www.centos.org/"
[2026-03-09 09:54:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 09:54:35] 
[2026-03-09 09:54:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 09:54:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 09:54:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 09:54:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 09:54:35] 
[2026-03-09 09:54:35] 2026-03-09 13:53:44,395 | INFO     | **************************************
[2026-03-09 09:54:35] 2026-03-09 13:53:44,899 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-09 09:54:35] 2026-03-09 13:53:45,092 | INFO     | sufficient remaining disk space (74143760384 B)
[2026-03-09 09:54:35] 2026-03-09 13:53:45,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 09:54:35] 2026-03-09 13:53:45,092 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 09:54:35] 2026-03-09 13:53:45,092 | INFO     | update_server=False
[2026-03-09 09:54:35] 2026-03-09 13:53:45,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 09:54:35] 2026-03-09 13:53:45,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:54:35] 2026-03-09 13:53:45,093 | INFO     | aborting loop
[2026-03-09 09:54:35] 2026-03-09 13:53:45,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:54:35] 2026-03-09 13:53:45,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 09:54:35] 2026-03-09 13:53:45,704 | INFO     | all job control threads have been joined
[2026-03-09 09:54:35] 2026-03-09 13:53:46,098 | INFO     | [job] retrieve thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:46,100 | INFO     | [job] job monitor thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:46,130 | INFO     | all payload control threads have been joined
[2026-03-09 09:54:35] 2026-03-09 13:53:46,146 | INFO     | [job] queue monitor thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:46,207 | INFO     | all data control threads have been joined
[2026-03-09 09:54:35] 2026-03-09 13:53:46,369 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:46,423 | INFO     | [data] copytool_in thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:46,433 | INFO     | [job] validate thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:46,443 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:46,632 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:46,710 | INFO     | [job] control thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:47,040 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:47,159 | INFO     | [payload] control thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:47,169 | INFO     | [payload] validate_post thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:47,170 | INFO     | [payload] failed_post thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:47,223 | INFO     | [data] control thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:47,554 | INFO     | [data] copytool_out thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:53:48,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 09:54:35] 2026-03-09 13:53:52,149 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 09:54:35] 2026-03-09 13:54:14,160 | INFO     | PID=2385249 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 09:54:35] 2026-03-09 13:54:14,160 | INFO     | .. there are 33 such processes running
[2026-03-09 09:54:35] 2026-03-09 13:54:14,161 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 09:54:35] 2026-03-09 13:54:14,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 09:54:35] 2026-03-09 13:54:14,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 09:54:35] 2026-03-09 13:54:23,897 | INFO     | [monitor] cgroup control has ended
[2026-03-09 09:54:35] 2026-03-09 13:54:25,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651499071296)>', '<ExcThread(monitor, started 139651146815232)>']
[2026-03-09 09:54:35] 2026-03-09 13:54:26,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 09:54:35] 2026-03-09 13:54:26,283 | INFO     | [monitor] control thread has ended
[2026-03-09 09:54:35] 2026-03-09 13:54:30,640 | INFO     | all workflow threads have been joined
[2026-03-09 09:54:35] 2026-03-09 13:54:30,641 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 09:54:35] 2026-03-09 13:54:30,641 | INFO     | traces error code: 0
[2026-03-09 09:54:35] 2026-03-09 13:54:30,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 09:54:35] 2026-03-09 13:54:32,372 [wrapper] ==== pilot stdout END ====
[2026-03-09 09:54:35] 2026-03-09 13:54:32,412 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 09:54:35] 2026-03-09 13:54:32,452 [wrapper] pilotpid: 2385249
[2026-03-09 09:54:35] 2026-03-09 13:54:32,487 [wrapper] Pilot exit status: 0
[2026-03-09 09:54:35] 2026-03-09 13:54:32,620 [wrapper] pandaids: 7045696566
[2026-03-09 09:54:35] 2026-03-09 13:54:33,496 [wrapper] cleanup supervisor_pilot 3572320 2385250
[2026-03-09 09:54:35] 2026-03-09 13:54:33,529 [wrapper] Test setup, not cleaning
[2026-03-09 09:54:35] 2026-03-09 13:54:33,627 [wrapper] apfmon messages muted
[2026-03-09 09:54:35] 2026-03-09 13:54:33,703 [wrapper] ==== wrapper stdout END ====
[2026-03-09 09:54:35] 2026-03-09 13:54:33,803 [wrapper] ==== wrapper stderr END ====
[2026-03-09 09:54:35]  *** Error codes and diagnostics ***
[2026-03-09 09:54:35]     "exeErrorCode": 0,
[2026-03-09 09:54:35]     "exeErrorDiag": "",
[2026-03-09 09:54:35]     "pilotErrorCode": 0,
[2026-03-09 09:54:35]     "pilotErrorDiag": "",
[2026-03-09 09:54:35]  *** Listing of results directory ***
[2026-03-09 09:54:35] total 664020
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas    584627 Mar  7 20:07 pilot3.tar.gz
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas      5111 Mar  7 20:08 queuedata.json
[2026-03-09 09:54:35] -rwx------. 1 boincer umatlas     36322 Mar  7 20:09 runpilot2-wrapper.sh
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas       100 Mar  8 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 09:54:35] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 00:03 run_atlas
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas       105 Mar  8 00:03 job.xml
[2026-03-09 09:54:35] -rw-r--r--. 2 boincer umatlas 358251587 Mar  8 00:03 EVNT.48997965._000009.pool.root.1
[2026-03-09 09:54:35] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 00:03 start_atlas.sh
[2026-03-09 09:54:35] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 00:03 shared
[2026-03-09 09:54:35] -rw-r--r--. 2 boincer umatlas    597950 Mar  8 00:03 input.tar.gz
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas         0 Mar  8 00:03 boinc_lockfile
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas      2564 Mar  8 00:04 pandaJob.out
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas        57 Mar  8 00:04 setup.sh.local
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas    999169 Mar  8 00:05 agis_schedconf.cvmfs.json
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas       431 Mar  8 00:06 workernode_map.json
[2026-03-09 09:54:35] drwx------. 5 boincer umatlas      4096 Mar  8 00:06 pilot3
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas      6658 Mar  9 09:46 init_data.xml
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas 288300912 Mar  9 09:46 HITS.48997968._000162.pool.root.1
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas       531 Mar  9 09:46 boinc_task_state.xml
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas      1041 Mar  9 09:53 memory_monitor_summary.json
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas   1511578 Mar  9 09:53 agis_ddmendpoints.agis.ALL.json
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas   1637584 Mar  9 09:53 log.48997968._000162.job.log.tgz.1
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas      6377 Mar  9 09:53 heartbeat.json
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas        95 Mar  9 09:54 pilot_heartbeat.json
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas      4820 Mar  9 09:54 pilotlog.txt
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas  13102733 Mar  9 09:54 log.48997968._000162.job.log.1
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas       357 Mar  9 09:54 output.list
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 09:54 boinc_mmap_file
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas        28 Mar  9 09:54 wrapper_checkpoint.txt
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas       620 Mar  9 09:54 runtime_log
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas  14755840 Mar  9 09:54 result.tar.gz
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas      9328 Mar  9 09:54 runtime_log.err
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas       657 Mar  9 09:54 PE5KDm4oHJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmsHVLDm0hLQUn.diag
[2026-03-09 09:54:35] -rw-r--r--. 1 boincer umatlas     21618 Mar  9 09:54 stderr.txt
[2026-03-09 09:54:35] HITS file was successfully produced:
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas 288300912 Mar  9 09:46 shared/HITS.pool.root.1
[2026-03-09 09:54:35]  *** Contents of shared directory: ***
[2026-03-09 09:54:35] total 646416
[2026-03-09 09:54:35] -rw-r--r--. 2 boincer umatlas 358251587 Mar  8 00:03 ATLAS.root_0
[2026-03-09 09:54:35] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 00:03 start_atlas.sh
[2026-03-09 09:54:35] -rw-r--r--. 2 boincer umatlas    597950 Mar  8 00:03 input.tar.gz
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas 288300912 Mar  9 09:46 HITS.pool.root.1
[2026-03-09 09:54:35] -rw-------. 1 boincer umatlas  14755840 Mar  9 09:54 result.tar.gz
09:54:36 (2369706): run_atlas exited; CPU time 79810.992990
09:54:36 (2369706): called boinc_finish(0)

</stderr_txt>
]]>

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