Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:26 (3514043): wrapper (7.7.26015): starting
00:03:26 (3514043): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 00:03:26] Arguments: --nthreads 8
[2026-03-08 00:03:26] Threads: 8
[2026-03-08 00:03:26] Checking for CVMFS
[2026-03-08 00:03:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 00:03:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 00:03:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 00:03:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 00:03:30] 2.13.3.0 8492 105244 405160 157027 0 268 36266220 39288833 16342 16776704 0 194164846 99.478 303663029 29269 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-08 00:03:30] CVMFS is ok
[2026-03-08 00:03:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 00:03:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 00:03:30] Further information can be found at the LHC@home message board.
[2026-03-08 00:03:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 00:03:30] Checking for apptainer binary...
[2026-03-08 00:03:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 00:03:30] Running /usr/bin/apptainer --version
[2026-03-08 00:03:30] apptainer version 1.4.5-2.el9
[2026-03-08 00:03:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 00:03:30] c-211-22.aglt2.org
[2026-03-08 00:03:30] apptainer works
[2026-03-08 00:03:30] Set ATHENA_PROC_NUMBER=8
[2026-03-08 00:03:30] Set ATHENA_CORE_NUMBER=8
[2026-03-08 00:03:31] Starting ATLAS job with PandaID=7045696516
[2026-03-08 00:03:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 13:46:45]  *** The last 200 lines of the pilot log: ***
[2026-03-09 13:46:45] 2026-03-09 09:38:20,359 | INFO     | mean x: 1772997752.8787158
[2026-03-09 13:46:45] 2026-03-09 09:38:20,359 | INFO     | mean y: 2536113.416765755
[2026-03-09 13:46:45] 2026-03-09 09:38:20,359 | INFO     | intersect: -2565448217.386384
[2026-03-09 13:46:45] 2026-03-09 09:38:20,365 | INFO     | chi2: 7.061087142928092
[2026-03-09 13:46:45] 2026-03-09 09:38:20,368 | INFO     | sum of square deviations: 1462408163173.9912
[2026-03-09 13:46:45] 2026-03-09 09:38:20,601 | INFO     | PID=3542882 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 13:46:45] 2026-03-09 09:38:20,615 | INFO     | .. there are 31 such processes running
[2026-03-09 13:46:45] 2026-03-09 09:38:20,644 | INFO     | sum of deviations: 2242429832622.189
[2026-03-09 13:46:45] 2026-03-09 09:38:20,644 | INFO     | mean x: 1772997600.3822303
[2026-03-09 13:46:45] 2026-03-09 09:38:20,644 | INFO     | mean y: 2537334.2009540848
[2026-03-09 13:46:45] 2026-03-09 09:38:20,645 | INFO     | intersect: -2716144640.0815163
[2026-03-09 13:46:45] 2026-03-09 09:38:20,651 | INFO     | chi2: 6.306734398715355
[2026-03-09 13:46:45] 2026-03-09 09:38:20,652 | INFO     | current chi2=6.306734398715355 (change=10.683237990742633 %)
[2026-03-09 13:46:45] 2026-03-09 09:38:20,652 | INFO     | right removable region: 1676
[2026-03-09 13:46:45] 2026-03-09 09:38:20,654 | INFO     | sum of square deviations: 1462406850940.2253
[2026-03-09 13:46:45] 2026-03-09 09:38:21,124 | INFO     | sum of deviations: 1581426191554.4502
[2026-03-09 13:46:45] 2026-03-09 09:38:21,124 | INFO     | mean x: 1772997905.3828266
[2026-03-09 13:46:45] 2026-03-09 09:38:21,124 | INFO     | mean y: 2542571.4323196183
[2026-03-09 13:46:45] 2026-03-09 09:38:21,124 | INFO     | intersect: -1914752416.1704063
[2026-03-09 13:46:45] 2026-03-09 09:38:21,198 | INFO     | chi2: 3.3293765561906516
[2026-03-09 13:46:45] 2026-03-09 09:38:21,198 | INFO     | current chi2=3.3293765561906516 (change=52.848952451675515 %)
[2026-03-09 13:46:45] 2026-03-09 09:38:21,195 | INFO     | monitor loop #3005: job 0:7045696516 is in state 'finished'
[2026-03-09 13:46:45] 2026-03-09 09:38:21,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 13:46:45] 2026-03-09 09:38:21,252 | INFO     | sum of square deviations: 1449365181716.5535
[2026-03-09 13:46:45] 2026-03-09 09:38:21,616 | INFO     | time since job start (102746s) is within the limit (349056.0s)
[2026-03-09 13:46:45] 2026-03-09 09:38:22,151 | INFO     | sum of deviations: 1209175577489.2363
[2026-03-09 13:46:45] 2026-03-09 09:38:22,151 | INFO     | mean x: 1772998057.881579
[2026-03-09 13:46:45] 2026-03-09 09:38:22,152 | INFO     | mean y: 2546922.9557416267
[2026-03-09 13:46:45] 2026-03-09 09:38:22,152 | INFO     | intersect: -1476628910.416472
[2026-03-09 13:46:45] 2026-03-09 09:38:22,154 | INFO     | chi2: 1.6663307353829229
[2026-03-09 13:46:45] 2026-03-09 09:38:22,185 | INFO     | current chi2=1.6663307353829229 (change=49.95066772232348 %)
[2026-03-09 13:46:45] 2026-03-09 09:38:22,187 | INFO     | sum of square deviations: 1436401281640.8743
[2026-03-09 13:46:45] 2026-03-09 09:38:22,956 | INFO     | sum of deviations: 1011860377167.6713
[2026-03-09 13:46:45] 2026-03-09 09:38:22,956 | INFO     | mean x: 1772998210.380324
[2026-03-09 13:46:45] 2026-03-09 09:38:22,957 | INFO     | mean y: 2549244.093581284
[2026-03-09 13:46:45] 2026-03-09 09:38:22,957 | INFO     | intersect: -1246423909.0239325
[2026-03-09 13:46:45] 2026-03-09 09:38:22,959 | INFO     | chi2: 1.2320383831022996
[2026-03-09 13:46:45] 2026-03-09 09:38:22,959 | INFO     | current chi2=1.2320383831022996 (change=26.06279432161004 %)
[2026-03-09 13:46:45] 2026-03-09 09:38:22,961 | INFO     | sum of square deviations: 1423514511767.6487
[2026-03-09 13:46:45] 2026-03-09 09:38:23,092 | INFO     | sum of deviations: 887222679389.1274
[2026-03-09 13:46:45] 2026-03-09 09:38:23,093 | INFO     | mean x: 1772998362.881468
[2026-03-09 13:46:45] 2026-03-09 09:38:23,093 | INFO     | mean y: 2550718.406738869
[2026-03-09 13:46:45] 2026-03-09 09:38:23,093 | INFO     | intersect: -1102492008.6357172
[2026-03-09 13:46:45] 2026-03-09 09:38:23,095 | INFO     | chi2: 1.0540560298365431
[2026-03-09 13:46:45] 2026-03-09 09:38:23,095 | INFO     | current chi2=1.0540560298365431 (change=14.44616951117976 %)
[2026-03-09 13:46:45] 2026-03-09 09:38:23,096 | INFO     | left removable region: 40
[2026-03-09 13:46:45] 2026-03-09 09:38:23,098 | INFO     | sum of square deviations: 1357746668218.997
[2026-03-09 13:46:45] 2026-03-09 09:38:23,168 | INFO     | sum of deviations: 694064497428.427
[2026-03-09 13:46:45] 2026-03-09 09:38:23,168 | INFO     | mean x: 1772998789.881418
[2026-03-09 13:46:45] 2026-03-09 09:38:23,168 | INFO     | mean y: 2555605.471271394
[2026-03-09 13:46:45] 2026-03-09 09:38:23,168 | INFO     | intersect: -903781005.6540159
[2026-03-09 13:46:45] 2026-03-09 09:38:23,170 | INFO     | chi2: 0.0369450219685452
[2026-03-09 13:46:45] 2026-03-09 09:38:23,171 | INFO     | current memory leak: 0.51 B/s (using 1636 data points, chi2=0.04)
[2026-03-09 13:46:45] 2026-03-09 09:38:23,172 | INFO     | could have reported an average CPU frequency of 2899 MHz (60 samples)
[2026-03-09 13:46:45] 2026-03-09 09:38:23,173 | INFO     | ..............................
[2026-03-09 13:46:45] 2026-03-09 09:38:23,173 | INFO     | . Timing measurements:
[2026-03-09 13:46:45] 2026-03-09 09:38:23,173 | INFO     | . get job = 0 s
[2026-03-09 13:46:45] 2026-03-09 09:38:23,173 | INFO     | . initial setup = 63 s
[2026-03-09 13:46:45] 2026-03-09 09:38:23,173 | INFO     | . payload setup = 71 s
[2026-03-09 13:46:45] 2026-03-09 09:38:23,173 | INFO     | . stage-in = 0 s
[2026-03-09 13:46:45] 2026-03-09 09:38:23,174 | INFO     | . payload execution = 102633 s
[2026-03-09 13:46:45] 2026-03-09 09:38:23,174 | INFO     | . stage-out = 15 s
[2026-03-09 13:46:45] 2026-03-09 09:38:23,174 | INFO     | . log creation = 1 s
[2026-03-09 13:46:45] 2026-03-09 09:38:23,174 | INFO     | ..............................
[2026-03-09 13:46:45] 2026-03-09 09:38:23,657 | INFO     | time since job start (102748s) is within the limit (349056.0s)
[2026-03-09 13:46:45] 2026-03-09 09:38:23,907 | INFO     | 
[2026-03-09 13:46:45] 2026-03-09 09:38:23,908 | INFO     | job summary report
[2026-03-09 13:46:45] 2026-03-09 09:38:23,908 | INFO     | --------------------------------------------------
[2026-03-09 13:46:45] 2026-03-09 09:38:23,908 | INFO     | PanDA job id: 7045696516
[2026-03-09 13:46:45] 2026-03-09 09:38:23,909 | INFO     | task id: 48997968
[2026-03-09 13:46:45] 2026-03-09 09:38:23,909 | INFO     | errors: (none)
[2026-03-09 13:46:45] 2026-03-09 09:38:23,909 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 13:46:45] 2026-03-09 09:38:23,909 | INFO     | pilot state: finished 
[2026-03-09 13:46:45] 2026-03-09 09:38:23,909 | INFO     | transexitcode: 0
[2026-03-09 13:46:45] 2026-03-09 09:38:23,910 | INFO     | exeerrorcode: 0
[2026-03-09 13:46:45] 2026-03-09 09:38:23,910 | INFO     | exeerrordiag: 
[2026-03-09 13:46:45] 2026-03-09 09:38:23,910 | INFO     | exitcode: 0
[2026-03-09 13:46:45] 2026-03-09 09:38:23,910 | INFO     | exitmsg: OK
[2026-03-09 13:46:45] 2026-03-09 09:38:23,910 | INFO     | cpuconsumptiontime: 117146 s
[2026-03-09 13:46:45] 2026-03-09 09:38:23,910 | INFO     | nevents: 400
[2026-03-09 13:46:45] 2026-03-09 09:38:23,910 | INFO     | neventsw: 0
[2026-03-09 13:46:45] 2026-03-09 09:38:23,911 | INFO     | pid: 3599464
[2026-03-09 13:46:45] 2026-03-09 09:38:23,911 | INFO     | pgrp: 3599464
[2026-03-09 13:46:45] 2026-03-09 09:38:23,911 | INFO     | corecount: 8
[2026-03-09 13:46:45] 2026-03-09 09:38:23,936 | INFO     | event service: False
[2026-03-09 13:46:45] 2026-03-09 09:38:23,936 | INFO     | sizes: {0: 2295319, 2: 2295375, 3: 2295431, 4: 2295864, 5: 2295948, 102715: 2358658, 102717: 2358785, 102736: 2363127, 102739: 2363183, 102743: 2363377}
[2026-03-09 13:46:45] 2026-03-09 09:38:23,936 | INFO     | --------------------------------------------------
[2026-03-09 13:46:45] 2026-03-09 09:38:23,936 | INFO     | 
[2026-03-09 13:46:45] 2026-03-09 09:38:23,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-09 13:46:45] 2026-03-09 09:38:24,111 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,111 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,112 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,114 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 13:46:45] 2026-03-09 09:38:24,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,114 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 13:46:45] 2026-03-09 09:38:24,114 | INFO     | job 7045696516 has completed (purged errors)
[2026-03-09 13:46:45] 2026-03-09 09:38:24,140 | INFO     | overall cleanup function is called
[2026-03-09 13:46:45] 2026-03-09 09:38:25,176 | INFO     | --- collectZombieJob: --- 10, [3599464]
[2026-03-09 13:46:45] 2026-03-09 09:38:25,176 | INFO     | zombie collector waiting for pid 3599464
[2026-03-09 13:46:45] 2026-03-09 09:38:25,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 13:46:45] 2026-03-09 09:38:25,176 | INFO     | collected zombie processes
[2026-03-09 13:46:45] 2026-03-09 09:38:25,176 | INFO     | will attempt to kill all subprocesses of pid=3599464
[2026-03-09 13:46:45] 2026-03-09 09:38:30,482 | INFO     | process IDs to be killed: [3599464] (in reverse order)
[2026-03-09 13:46:45] 2026-03-09 09:38:30,940 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 13:46:45] 2026-03-09 09:38:30,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 13:46:45] 2026-03-09 09:38:30,993 | INFO     | did not find any defunct processes belonging to 3599464
[2026-03-09 13:46:45] 2026-03-09 09:38:31,208 | INFO     | did not find any defunct processes belonging to 3599464
[2026-03-09 13:46:45] 2026-03-09 09:38:31,208 | INFO     | ready for new job
[2026-03-09 13:46:45] 2026-03-09 09:38:31,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 13:46:45] 2026-03-09 09:38:31,236 | INFO     | **************************************
[2026-03-09 13:46:45] 2026-03-09 09:38:31,236 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 13:46:45] 2026-03-09 09:38:31,236 | INFO     | **************************************
[2026-03-09 13:46:45] 2026-03-09 09:38:31,236 | INFO     | 
[2026-03-09 13:46:45] 2026-03-09 09:38:31,289 | INFO     | architecture information:
[2026-03-09 13:46:45] 2026-03-09 09:38:31,321 | INFO     | executing command: cat /etc/os-release
[2026-03-09 13:46:45] 2026-03-09 09:38:31,603 | INFO     | cat /etc/os-release:
[2026-03-09 13:46:45] NAME="CentOS Linux"
[2026-03-09 13:46:45] VERSION="7 (Core)"
[2026-03-09 13:46:45] ID="centos"
[2026-03-09 13:46:45] ID_LIKE="rhel fedora"
[2026-03-09 13:46:45] VERSION_ID="7"
[2026-03-09 13:46:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 13:46:45] ANSI_COLOR="0;31"
[2026-03-09 13:46:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 13:46:45] HOME_URL="https://www.centos.org/"
[2026-03-09 13:46:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 13:46:45] 
[2026-03-09 13:46:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 13:46:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 13:46:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 13:46:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 13:46:45] 
[2026-03-09 13:46:45] 2026-03-09 09:38:31,603 | INFO     | **************************************
[2026-03-09 13:46:45] 2026-03-09 09:38:32,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-09 13:46:45] 2026-03-09 09:38:32,293 | INFO     | sufficient remaining disk space (49470767104 B)
[2026-03-09 13:46:45] 2026-03-09 09:38:32,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 13:46:45] 2026-03-09 09:38:32,294 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 13:46:45] 2026-03-09 09:38:32,294 | INFO     | update_server=False
[2026-03-09 13:46:45] 2026-03-09 09:38:32,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 13:46:45] 2026-03-09 09:38:32,373 | INFO     | all job control threads have been joined
[2026-03-09 13:46:45] 2026-03-09 09:38:32,411 | INFO     | all data control threads have been joined
[2026-03-09 13:46:45] 2026-03-09 09:38:32,411 | INFO     | all payload control threads have been joined
[2026-03-09 13:46:45] 2026-03-09 09:38:32,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:46:45] 2026-03-09 09:38:32,599 | INFO     | aborting loop
[2026-03-09 13:46:45] 2026-03-09 09:38:32,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:46:45] 2026-03-09 09:38:33,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 13:46:45] 2026-03-09 09:38:33,314 | INFO     | [job] retrieve thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,379 | INFO     | [job] control thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,417 | INFO     | [data] control thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,429 | INFO     | [payload] control thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,605 | INFO     | [job] job monitor thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,683 | INFO     | [job] queue monitor thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,799 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,821 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,821 | INFO     | [job] validate thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,826 | INFO     | [data] copytool_in thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,833 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,845 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:33,856 | INFO     | [payload] validate_post thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:34,598 | INFO     | [payload] failed_post thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:35,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 13:46:45] 2026-03-09 09:38:35,189 | INFO     | [data] copytool_out thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:38,669 | INFO     | [monitor] cgroup control has ended
[2026-03-09 13:46:45] 2026-03-09 09:38:39,085 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 13:46:45] 2026-03-09 09:38:39,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091089352512)>', '<ExcThread(monitor, started 140090558904064)>']
[2026-03-09 13:46:45] 2026-03-09 09:38:44,816 | INFO     | all workflow threads have been joined
[2026-03-09 13:46:45] 2026-03-09 09:38:44,816 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 13:46:45] 2026-03-09 09:38:44,816 | INFO     | traces error code: 0
[2026-03-09 13:46:45] 2026-03-09 09:38:44,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 13:46:45] 2026-03-09 09:38:58,912 | INFO     | PID=3542882 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 13:46:45] 2026-03-09 09:38:58,913 | INFO     | .. there are 30 such processes running
[2026-03-09 13:46:45] 2026-03-09 09:38:58,914 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 13:46:45] 2026-03-09 09:38:58,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 13:46:45] 2026-03-09 09:38:58,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 13:46:45] 2026-03-09 09:38:58,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 13:46:45] 2026-03-09 09:38:58,915 | INFO     | [monitor] control thread has ended
[2026-03-09 13:46:45] 2026-03-09 09:39:06,952 [wrapper] ==== pilot stdout END ====
[2026-03-09 13:46:45] 2026-03-09 09:39:06,979 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 13:46:45] 2026-03-09 09:39:07,017 [wrapper] pilotpid: 3542882
[2026-03-09 13:46:45] 2026-03-09 09:39:07,020 [wrapper] Pilot exit status: 0
[2026-03-09 13:46:45] 2026-03-09 09:39:07,032 [wrapper] pandaids: 7045696516
[2026-03-09 13:46:45] 2026-03-09 09:39:07,129 [wrapper] cleanup supervisor_pilot 4088638 3542883
[2026-03-09 13:46:45] 2026-03-09 09:39:07,133 [wrapper] Test setup, not cleaning
[2026-03-09 13:46:45] 2026-03-09 09:39:07,135 [wrapper] apfmon messages muted
[2026-03-09 13:46:45] 2026-03-09 09:39:07,138 [wrapper] ==== wrapper stdout END ====
[2026-03-09 13:46:45] 2026-03-09 09:39:07,140 [wrapper] ==== wrapper stderr END ====
[2026-03-09 13:46:45]  *** Error codes and diagnostics ***
[2026-03-09 13:46:45]     "exeErrorCode": 0,
[2026-03-09 13:46:45]     "exeErrorDiag": "",
[2026-03-09 13:46:45]     "pilotErrorCode": 0,
[2026-03-09 13:46:45]     "pilotErrorDiag": "",
[2026-03-09 13:46:45]  *** Listing of results directory ***
[2026-03-09 13:46:45] total 654988
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas    584627 Mar  7 20:07 pilot3.tar.gz
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas      5111 Mar  7 20:08 queuedata.json
[2026-03-09 13:46:45] -rwx------. 1 boincer umatlas     36322 Mar  7 20:09 runpilot2-wrapper.sh
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas       100 Mar  8 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 13:46:45] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 00:03 run_atlas
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas       105 Mar  8 00:03 job.xml
[2026-03-09 13:46:45] -rw-r--r--. 2 boincer umatlas 357720211 Mar  8 00:03 EVNT.48997965._000005.pool.root.1
[2026-03-09 13:46:45] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 00:03 start_atlas.sh
[2026-03-09 13:46:45] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 00:03 shared
[2026-03-09 13:46:45] -rw-r--r--. 2 boincer umatlas    597946 Mar  8 00:03 input.tar.gz
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas         0 Mar  8 00:03 boinc_lockfile
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas      2564 Mar  8 00:03 pandaJob.out
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas        57 Mar  8 00:03 setup.sh.local
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas       433 Mar  8 00:05 workernode_map.json
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas    999169 Mar  8 00:05 agis_schedconf.cvmfs.json
[2026-03-09 13:46:45] drwx------. 5 boincer umatlas      4096 Mar  8 00:05 pilot3
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas 290492079 Mar  9 05:36 HITS.48997968._000112.pool.root.1
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas       531 Mar  9 05:36 boinc_task_state.xml
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas      1049 Mar  9 05:37 memory_monitor_summary.json
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas   1511578 Mar  9 05:38 agis_ddmendpoints.agis.ALL.json
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas   1228172 Mar  9 05:38 log.48997968._000112.job.log.tgz.1
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas      6386 Mar  9 05:38 heartbeat.json
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas        95 Mar  9 05:38 pilot_heartbeat.json
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas       823 Mar  9 05:38 pilotlog.txt
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas   8057306 Mar  9 05:39 log.48997968._000112.job.log.1
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas       357 Mar  9 05:39 output.list
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas       620 Mar  9 05:39 runtime_log
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas   9297920 Mar  9 05:39 result.tar.gz
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas      9343 Mar  9 05:39 runtime_log.err
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas       662 Mar  9 05:39 8vrNDm3oHJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNHVLDmbmD0fn.diag
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas      6525 Mar  9 13:46 init_data.xml
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 13:46 boinc_mmap_file
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas        28 Mar  9 13:46 wrapper_checkpoint.txt
[2026-03-09 13:46:45] -rw-r--r--. 1 boincer umatlas     21278 Mar  9 13:46 stderr.txt
[2026-03-09 13:46:45] HITS file was successfully produced:
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas 290492079 Mar  9 05:36 shared/HITS.pool.root.1
[2026-03-09 13:46:45]  *** Contents of shared directory: ***
[2026-03-09 13:46:45] total 642712
[2026-03-09 13:46:45] -rw-r--r--. 2 boincer umatlas 357720211 Mar  8 00:03 ATLAS.root_0
[2026-03-09 13:46:45] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 00:03 start_atlas.sh
[2026-03-09 13:46:45] -rw-r--r--. 2 boincer umatlas    597946 Mar  8 00:03 input.tar.gz
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas 290492079 Mar  9 05:36 HITS.pool.root.1
[2026-03-09 13:46:45] -rw-------. 1 boincer umatlas   9297920 Mar  9 05:39 result.tar.gz
13:46:47 (3514043): run_atlas exited; CPU time 121178.513908
13:46:47 (3514043): called boinc_finish(0)

</stderr_txt>
]]>

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