Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
20:24:50 (2907603): wrapper (7.7.26015): starting
20:24:50 (2907603): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 20:24:50] Arguments: --nthreads 4
[2026-03-07 20:24:50] Threads: 4
[2026-03-07 20:24:50] Checking for CVMFS
[2026-03-07 20:24:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 20:24:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 20:24:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 20:24:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 20:24:51] 2.13.3.0 9162 7872 51024 157022 0 60 3947123 4096000 1924 130560 2 6818290 99.991 275368 83 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 20:24:51] CVMFS is ok
[2026-03-07 20:24:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 20:24:51] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 20:24:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 20:24:51] Further information can be found at the LHC@home message board.
[2026-03-07 20:24:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 20:24:51] Checking for apptainer binary...
[2026-03-07 20:24:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 20:24:51] Running /usr/bin/apptainer --version
[2026-03-07 20:24:51] apptainer version 1.4.5
[2026-03-07 20:24:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 20:24:51] SETI64-Ubuntu
[2026-03-07 20:24:51] apptainer works
[2026-03-07 20:24:51] Set ATHENA_PROC_NUMBER=4
[2026-03-07 20:24:51] Set ATHENA_CORE_NUMBER=4
[2026-03-07 20:24:51] Starting ATLAS job with PandaID=7039266634
[2026-03-07 20:24:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/83 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 22:49:28]  *** The last 200 lines of the pilot log: ***
[2026-03-07 22:49:28] 2026-03-08 03:48:19,120 | INFO     | log transfer has been attempted: DONE
[2026-03-07 22:49:28] 2026-03-08 03:48:19,120 | INFO     | job 7039266634 has finished - writing final server update
[2026-03-07 22:49:28] 2026-03-08 03:48:19,121 | INFO     | total number of processed events: 400 (read)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,143 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/83/PanDA_Pilot-7039266634/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,144 | INFO     | extracted standard info from prmon json
[2026-03-07 22:49:28] 2026-03-08 03:48:19,144 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 22:49:28] 2026-03-08 03:48:19,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 22:49:28] 2026-03-08 03:48:19,144 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 22:49:28] 2026-03-08 03:48:19,144 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 22:49:28] 2026-03-08 03:48:19,147 | INFO     | fitting pss+swap vs Time
[2026-03-07 22:49:28] 2026-03-08 03:48:19,147 | INFO     | sum of square deviations: 869188390.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,148 | INFO     | sum of deviations: -16908559012.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,148 | INFO     | mean x: 1772937400.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,148 | INFO     | mean y: 2341507.234042553
[2026-03-07 22:49:28] 2026-03-08 03:48:19,148 | INFO     | intersect: 34491776706.06573
[2026-03-07 22:49:28] 2026-03-08 03:48:19,148 | INFO     | chi2: 2.230773256031756
[2026-03-07 22:49:28] 2026-03-08 03:48:19,149 | INFO     | sum of square deviations: 779958810.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,149 | INFO     | sum of deviations: -7194775966.999999
[2026-03-07 22:49:28] 2026-03-08 03:48:19,149 | INFO     | mean x: 1772937247.5
[2026-03-07 22:49:28] 2026-03-08 03:48:19,149 | INFO     | mean y: 2357684.338235294
[2026-03-07 22:49:28] 2026-03-08 03:48:19,149 | INFO     | intersect: 16356921714.856886
[2026-03-07 22:49:28] 2026-03-08 03:48:19,150 | INFO     | chi2: 1.448656268289954
[2026-03-07 22:49:28] 2026-03-08 03:48:19,150 | INFO     | current chi2=1.448656268289954 (change=35.06035342798947 %)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,150 | INFO     | sum of square deviations: 697054930.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,151 | INFO     | sum of deviations: -6310269989.000001
[2026-03-07 22:49:28] 2026-03-08 03:48:19,151 | INFO     | mean x: 1772937095.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,151 | INFO     | mean y: 2359312.13740458
[2026-03-07 22:49:28] 2026-03-08 03:48:19,151 | INFO     | intersect: 16052330787.073166
[2026-03-07 22:49:28] 2026-03-08 03:48:19,151 | INFO     | chi2: 1.449138501807685
[2026-03-07 22:49:28] 2026-03-08 03:48:19,151 | INFO     | current chi2=1.449138501807685 (change=-0.033288332662949026 %)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,151 | INFO     | right removable region: 130
[2026-03-07 22:49:28] 2026-03-08 03:48:19,151 | INFO     | sum of square deviations: 779958810.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,152 | INFO     | sum of deviations: -33188408165.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,152 | INFO     | mean x: 1772937552.5
[2026-03-07 22:49:28] 2026-03-08 03:48:19,152 | INFO     | mean y: 2368708.382352941
[2026-03-07 22:49:28] 2026-03-08 03:48:19,152 | INFO     | intersect: 75443500200.2186
[2026-03-07 22:49:28] 2026-03-08 03:48:19,153 | INFO     | chi2: 0.8867567042598398
[2026-03-07 22:49:28] 2026-03-08 03:48:19,153 | INFO     | current chi2=0.8867567042598398 (change=60.2489091232311 %)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,153 | INFO     | sum of square deviations: 697054930.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,153 | INFO     | sum of deviations: -30766365467.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,154 | INFO     | mean x: 1772937705.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,154 | INFO     | mean y: 2364242.0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,154 | INFO     | intersect: 78255665430.55086
[2026-03-07 22:49:28] 2026-03-08 03:48:19,154 | INFO     | chi2: 0.8870152284223529
[2026-03-07 22:49:28] 2026-03-08 03:48:19,154 | INFO     | current chi2=0.8870152284223529 (change=-0.029153899967290054 %)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,154 | INFO     | left removable region: 20
[2026-03-07 22:49:28] 2026-03-08 03:48:19,154 | INFO     | sum of square deviations: 412686807.5
[2026-03-07 22:49:28] 2026-03-08 03:48:19,155 | INFO     | sum of deviations: -15233938120.500004
[2026-03-07 22:49:28] 2026-03-08 03:48:19,155 | INFO     | mean x: 1772937674.5
[2026-03-07 22:49:28] 2026-03-08 03:48:19,155 | INFO     | mean y: 2374849.9545454546
[2026-03-07 22:49:28] 2026-03-08 03:48:19,155 | INFO     | intersect: 65448670525.00149
[2026-03-07 22:49:28] 2026-03-08 03:48:19,155 | INFO     | chi2: 0.06599169591905352
[2026-03-07 22:49:28] 2026-03-08 03:48:19,155 | INFO     | current memory leak: -36.91 B/s (using 110 data points, chi2=0.07)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | could have reported an average CPU frequency of 2510 MHz (8 samples)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | ..............................
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | . Timing measurements:
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | . get job = 0 s
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | . initial setup = 7 s
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | . payload setup = 5 s
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | . stage-in = 0 s
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | . payload execution = 8567 s
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | . stage-out = 0 s
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | . log creation = 0 s
[2026-03-07 22:49:28] 2026-03-08 03:48:19,156 | INFO     | ..............................
[2026-03-07 22:49:28] 2026-03-08 03:48:19,237 | INFO     | 
[2026-03-07 22:49:28] 2026-03-08 03:48:19,238 | INFO     | job summary report
[2026-03-07 22:49:28] 2026-03-08 03:48:19,238 | INFO     | --------------------------------------------------
[2026-03-07 22:49:28] 2026-03-08 03:48:19,238 | INFO     | PanDA job id: 7039266634
[2026-03-07 22:49:28] 2026-03-08 03:48:19,238 | INFO     | task id: 48955006
[2026-03-07 22:49:28] 2026-03-08 03:48:19,238 | INFO     | errors: (none)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,238 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 22:49:28] 2026-03-08 03:48:19,238 | INFO     | pilot state: finished 
[2026-03-07 22:49:28] 2026-03-08 03:48:19,238 | INFO     | transexitcode: 0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | exeerrorcode: 0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | exeerrordiag: 
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | exitcode: 0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | exitmsg: OK
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | cpuconsumptiontime: 33529 s
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | nevents: 400
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | neventsw: 0
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | pid: 2924373
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | pgrp: 2924373
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | corecount: 4
[2026-03-07 22:49:28] 2026-03-08 03:48:19,239 | INFO     | event service: False
[2026-03-07 22:49:28] 2026-03-08 03:48:19,240 | INFO     | sizes: {0: 2295387, 1: 2295848, 11: 2295848, 8577: 2323805, 8578: 2323804, 8579: 2333072, 8580: 2333210}
[2026-03-07 22:49:28] 2026-03-08 03:48:19,240 | INFO     | --------------------------------------------------
[2026-03-07 22:49:28] 2026-03-08 03:48:19,240 | INFO     | 
[2026-03-07 22:49:28] 2026-03-08 03:48:19,240 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/83
[2026-03-07 22:49:28] 2026-03-08 03:48:19,275 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,275 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,275 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,275 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,277 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,277 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 22:49:28] 2026-03-08 03:48:19,277 | INFO     | job 7039266634 has completed (purged errors)
[2026-03-07 22:49:28] 2026-03-08 03:48:19,277 | INFO     | overall cleanup function is called
[2026-03-07 22:49:28] 2026-03-08 03:48:20,287 | INFO     | --- collectZombieJob: --- 10, [2924373]
[2026-03-07 22:49:28] 2026-03-08 03:48:20,287 | INFO     | zombie collector waiting for pid 2924373
[2026-03-07 22:49:28] 2026-03-08 03:48:20,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 22:49:28] 2026-03-08 03:48:20,287 | INFO     | collected zombie processes
[2026-03-07 22:49:28] 2026-03-08 03:48:20,287 | INFO     | will attempt to kill all subprocesses of pid=2924373
[2026-03-07 22:49:28] 2026-03-08 03:48:20,968 | INFO     | PID=2912085 has CPU usage=18.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 22:49:28] 2026-03-08 03:48:20,968 | INFO     | .. there are 4 such processes running
[2026-03-07 22:49:28] 2026-03-08 03:48:21,124 | INFO     | process IDs to be killed: [2924373] (in reverse order)
[2026-03-07 22:49:28] 2026-03-08 03:48:21,261 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 22:49:28] 2026-03-08 03:48:21,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 22:49:28] 2026-03-08 03:48:21,272 | INFO     | did not find any defunct processes belonging to 2924373
[2026-03-07 22:49:28] 2026-03-08 03:48:21,281 | INFO     | did not find any defunct processes belonging to 2924373
[2026-03-07 22:49:28] 2026-03-08 03:48:21,282 | INFO     | ready for new job
[2026-03-07 22:49:28] 2026-03-08 03:48:21,282 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 22:49:28] 2026-03-08 03:48:21,283 | INFO     | **************************************
[2026-03-07 22:49:28] 2026-03-08 03:48:21,283 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 22:49:28] 2026-03-08 03:48:21,283 | INFO     | **************************************
[2026-03-07 22:49:28] 2026-03-08 03:48:21,283 | INFO     | 
[2026-03-07 22:49:28] 2026-03-08 03:48:21,289 | INFO     | architecture information:
[2026-03-07 22:49:28] 2026-03-08 03:48:21,289 | INFO     | executing command: cat /etc/os-release
[2026-03-07 22:49:28] 2026-03-08 03:48:21,303 | INFO     | cat /etc/os-release:
[2026-03-07 22:49:28] NAME="CentOS Linux"
[2026-03-07 22:49:28] VERSION="7 (Core)"
[2026-03-07 22:49:28] ID="centos"
[2026-03-07 22:49:28] ID_LIKE="rhel fedora"
[2026-03-07 22:49:28] VERSION_ID="7"
[2026-03-07 22:49:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 22:49:28] ANSI_COLOR="0;31"
[2026-03-07 22:49:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 22:49:28] HOME_URL="https://www.centos.org/"
[2026-03-07 22:49:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 22:49:28] 
[2026-03-07 22:49:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 22:49:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 22:49:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 22:49:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 22:49:28] 
[2026-03-07 22:49:28] 2026-03-08 03:48:21,304 | INFO     | **************************************
[2026-03-07 22:49:28] 2026-03-08 03:48:21,807 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/83
[2026-03-07 22:49:28] 2026-03-08 03:48:21,830 | INFO     | sufficient remaining disk space (378490847232 B)
[2026-03-07 22:49:28] 2026-03-08 03:48:21,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 22:49:28] 2026-03-08 03:48:21,831 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 22:49:28] 2026-03-08 03:48:21,831 | INFO     | update_server=False
[2026-03-07 22:49:28] 2026-03-08 03:48:21,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 22:49:28] 2026-03-08 03:48:21,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 22:49:28] 2026-03-08 03:48:21,832 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-07 22:49:28] 2026-03-08 03:48:21,832 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 22:49:28] 2026-03-08 03:48:21,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 22:49:28] 2026-03-08 03:48:21,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 22:49:28] 2026-03-08 03:48:21,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 22:49:28] 2026-03-08 03:48:21,833 | INFO     | aborting loop
[2026-03-07 22:49:28] 2026-03-08 03:48:21,951 | INFO     | all job control threads have been joined
[2026-03-07 22:49:28] 2026-03-08 03:48:22,460 | INFO     | all payload control threads have been joined
[2026-03-07 22:49:28] 2026-03-08 03:48:22,533 | INFO     | all data control threads have been joined
[2026-03-07 22:49:28] 2026-03-08 03:48:22,837 | INFO     | [job] retrieve thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:22,838 | INFO     | [job] job monitor thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:22,955 | INFO     | [job] control thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:23,022 | INFO     | [payload] validate_post thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:23,150 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:23,299 | INFO     | [job] validate thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:23,465 | INFO     | [payload] control thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:23,530 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:23,538 | INFO     | [data] control thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:23,539 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:23,650 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:23,837 | INFO     | [data] copytool_out thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:24,007 | INFO     | [data] copytool_in thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:24,077 | INFO     | [payload] failed_post thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:24,248 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 22:49:28] 2026-03-08 03:48:24,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 22:49:28] 2026-03-08 03:48:25,254 | INFO     | [job] queue monitor thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:48:28,692 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 22:49:28] 2026-03-08 03:49:21,303 | INFO     | [monitor] cgroup control has ended
[2026-03-07 22:49:28] 2026-03-08 03:49:23,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137821046544192)>', '<ExcThread(monitor, started 137820685440768)>']
[2026-03-07 22:49:28] 2026-03-08 03:49:23,135 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 22:49:28] 2026-03-08 03:49:23,135 | INFO     | [monitor] control thread has ended
[2026-03-07 22:49:28] 2026-03-08 03:49:28,040 | INFO     | all workflow threads have been joined
[2026-03-07 22:49:28] 2026-03-08 03:49:28,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 22:49:28] 2026-03-08 03:49:28,040 | INFO     | traces error code: 0
[2026-03-07 22:49:28] 2026-03-08 03:49:28,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 22:49:28] 2026-03-08 03:49:28,186 [wrapper] ==== pilot stdout END ====
[2026-03-07 22:49:28] 2026-03-08 03:49:28,189 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 22:49:28] 2026-03-08 03:49:28,194 [wrapper] pilotpid: 2912085
[2026-03-07 22:49:28] 2026-03-08 03:49:28,198 [wrapper] Pilot exit status: 0
[2026-03-07 22:49:28] 2026-03-08 03:49:28,215 [wrapper] pandaids: 7039266634
[2026-03-07 22:49:28] 2026-03-08 03:49:28,333 [wrapper] cleanup supervisor_pilot 2951527 2912086
[2026-03-07 22:49:28] 2026-03-08 03:49:28,339 [wrapper] Test setup, not cleaning
[2026-03-07 22:49:28] 2026-03-08 03:49:28,344 [wrapper] apfmon messages muted
[2026-03-07 22:49:28] 2026-03-08 03:49:28,349 [wrapper] ==== wrapper stdout END ====
[2026-03-07 22:49:28] 2026-03-08 03:49:28,353 [wrapper] ==== wrapper stderr END ====
[2026-03-07 22:49:28]  *** Error codes and diagnostics ***
[2026-03-07 22:49:28]     "exeErrorCode": 0,
[2026-03-07 22:49:28]     "exeErrorDiag": "",
[2026-03-07 22:49:28]     "pilotErrorCode": 0,
[2026-03-07 22:49:28]     "pilotErrorDiag": "",
[2026-03-07 22:49:28]  *** Listing of results directory ***
[2026-03-07 22:49:28] total 613752
[2026-03-07 22:49:28] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 15:25 pilot3.tar.gz
[2026-03-07 22:49:28] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 15:26 runpilot2-wrapper.sh
[2026-03-07 22:49:28] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 15:27 queuedata.json
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 20:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 22:49:28] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 20:24 run_atlas
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 20:24 job.xml
[2026-03-07 22:49:28] -rw-r--r-- 2 whitlerd whitlerd 438930111 Mar  7 20:24 EVNT.46701403._000386.pool.root.1
[2026-03-07 22:49:28] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 20:24 start_atlas.sh
[2026-03-07 22:49:28] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 20:24 shared
[2026-03-07 22:49:28] -rw-r--r-- 2 whitlerd whitlerd    597956 Mar  7 20:24 input.tar.gz
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar  7 20:24 init_data.xml
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 20:24 boinc_setup_complete
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 20:24 boinc_lockfile
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd      2564 Mar  7 20:24 pandaJob.out
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd    999161 Mar  7 20:25 agis_schedconf.cvmfs.json
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 20:25 agis_ddmendpoints.agis.ALL.json
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd       423 Mar  7 20:25 workernode_map.json
[2026-03-07 22:49:28] drwx------ 5 whitlerd whitlerd      4096 Mar  7 20:25 pilot3
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd 182448826 Mar  7 22:47 HITS.48955006._019304.pool.root.1
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  7 22:47 boinc_task_state.xml
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd        95 Mar  7 22:48 pilot_heartbeat.json
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd      1018 Mar  7 22:48 memory_monitor_summary.json
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd    365948 Mar  7 22:48 log.48955006._019304.job.log.tgz.1
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd      6289 Mar  7 22:48 heartbeat.json
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  7 22:49 wrapper_checkpoint.txt
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 22:49 boinc_mmap_file
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd      4564 Mar  7 22:49 pilotlog.txt
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd   1216320 Mar  7 22:49 log.48955006._019304.job.log.1
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd       357 Mar  7 22:49 output.list
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 22:49 runtime_log
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd   1597440 Mar  7 22:49 result.tar.gz
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  7 22:49 runtime_log.err
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd       648 Mar  7 22:49 Ak5MDmPPDJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmThULDmFTJcrn.diag
[2026-03-07 22:49:28] -rw-rw-r-- 1 whitlerd whitlerd     21157 Mar  7 22:49 stderr.txt
[2026-03-07 22:49:28] HITS file was successfully produced:
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd 182448826 Mar  7 22:47 shared/HITS.pool.root.1
[2026-03-07 22:49:28]  *** Contents of shared directory: ***
[2026-03-07 22:49:28] total 608988
[2026-03-07 22:49:28] -rw-r--r-- 2 whitlerd whitlerd 438930111 Mar  7 20:24 ATLAS.root_0
[2026-03-07 22:49:28] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 20:24 start_atlas.sh
[2026-03-07 22:49:28] -rw-r--r-- 2 whitlerd whitlerd    597956 Mar  7 20:24 input.tar.gz
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd 182448826 Mar  7 22:47 HITS.pool.root.1
[2026-03-07 22:49:28] -rw------- 1 whitlerd whitlerd   1597440 Mar  7 22:49 result.tar.gz
22:49:30 (2907603): run_atlas exited; CPU time 33962.817145
22:49:30 (2907603): called boinc_finish(0)

</stderr_txt>
]]>

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