Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:18:56 (2132452): wrapper (7.7.26015): starting
17:18:56 (2132452): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 17:18:57] Arguments: --nthreads 4
[2026-03-09 17:18:57] Threads: 4
[2026-03-09 17:18:57] Checking for CVMFS
[2026-03-09 17:18:57] No cvmfs_config command found, will try listing directly
[2026-03-09 17:18:57] CVMFS is ok
[2026-03-09 17:18:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 17:18:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 17:18:57] Further information can be found at the LHC@home message board.
[2026-03-09 17:18:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 17:18:57] Checking for apptainer binary...
[2026-03-09 17:18:57] which: no apptainer in ((null))
[2026-03-09 17:18:57] apptainer is not installed, using version from CVMFS
[2026-03-09 17:18:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 17:18:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-03-09 17:18:57] apptainer works
[2026-03-09 17:18:57] Set ATHENA_PROC_NUMBER=4
[2026-03-09 17:18:57] Set ATHENA_CORE_NUMBER=4
[2026-03-09 17:18:57] Starting ATLAS job with PandaID=7039267268
[2026-03-09 17:18:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 20:01:13]  *** The last 200 lines of the pilot log: ***
[2026-03-09 20:01:13] 2026-03-09 19:00:32,377 | INFO     | extracted standard info from prmon json
[2026-03-09 20:01:13] 2026-03-09 19:00:32,377 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 20:01:13] 2026-03-09 19:00:32,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 20:01:13] 2026-03-09 19:00:32,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 20:01:13] 2026-03-09 19:00:32,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 20:01:13] 2026-03-09 19:00:32,381 | INFO     | fitting pss+swap vs Time
[2026-03-09 20:01:13] 2026-03-09 19:00:32,381 | INFO     | sum of square deviations: 1223016419.5
[2026-03-09 20:01:13] 2026-03-09 19:00:32,382 | INFO     | sum of deviations: -12933873615.0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,382 | INFO     | mean x: 1773078031.5
[2026-03-09 20:01:13] 2026-03-09 19:00:32,382 | INFO     | mean y: 2328238.189873418
[2026-03-09 20:01:13] 2026-03-09 19:00:32,382 | INFO     | intersect: 18753317025.67441
[2026-03-09 20:01:13] 2026-03-09 19:00:32,383 | INFO     | chi2: 2.14574048188368
[2026-03-09 20:01:13] 2026-03-09 19:00:32,383 | INFO     | sum of square deviations: 1110539892.0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,384 | INFO     | sum of deviations: -2669423135.000002
[2026-03-09 20:01:13] 2026-03-09 19:00:32,384 | INFO     | mean x: 1773077879.0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,384 | INFO     | mean y: 2341807.901960784
[2026-03-09 20:01:13] 2026-03-09 19:00:32,384 | INFO     | intersect: 4264318477.497666
[2026-03-09 20:01:13] 2026-03-09 19:00:32,385 | INFO     | chi2: 1.330737420319567
[2026-03-09 20:01:13] 2026-03-09 19:00:32,385 | INFO     | current chi2=1.330737420319567 (change=37.98236871817075 %)
[2026-03-09 20:01:13] 2026-03-09 19:00:32,385 | INFO     | sum of square deviations: 1005179777.0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,386 | INFO     | sum of deviations: -2527061609.4999976
[2026-03-09 20:01:13] 2026-03-09 19:00:32,386 | INFO     | mean x: 1773077726.5
[2026-03-09 20:01:13] 2026-03-09 19:00:32,386 | INFO     | mean y: 2342014.614864865
[2026-03-09 20:01:13] 2026-03-09 19:00:32,386 | INFO     | intersect: 4459929359.507984
[2026-03-09 20:01:13] 2026-03-09 19:00:32,386 | INFO     | chi2: 1.3303445888247503
[2026-03-09 20:01:13] 2026-03-09 19:00:32,386 | INFO     | current chi2=1.3303445888247503 (change=0.029519835304728254 %)
[2026-03-09 20:01:13] 2026-03-09 19:00:32,387 | INFO     | right removable region: 147
[2026-03-09 20:01:13] 2026-03-09 19:00:32,387 | INFO     | sum of square deviations: 1110539892.0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,388 | INFO     | sum of deviations: -28596121435.999992
[2026-03-09 20:01:13] 2026-03-09 19:00:32,388 | INFO     | mean x: 1773078184.0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,388 | INFO     | mean y: 2348977.6209150325
[2026-03-09 20:01:13] 2026-03-09 19:00:32,388 | INFO     | intersect: 45658663919.9628
[2026-03-09 20:01:13] 2026-03-09 19:00:32,388 | INFO     | chi2: 0.9402529185563621
[2026-03-09 20:01:13] 2026-03-09 19:00:32,388 | INFO     | current chi2=0.9402529185563621 (change=56.18049216599843 %)
[2026-03-09 20:01:13] 2026-03-09 19:00:32,389 | INFO     | sum of square deviations: 1005179777.0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,389 | INFO     | sum of deviations: -21106074816.5
[2026-03-09 20:01:13] 2026-03-09 19:00:32,390 | INFO     | mean x: 1773078336.5
[2026-03-09 20:01:13] 2026-03-09 19:00:32,390 | INFO     | mean y: 2338108.304054054
[2026-03-09 20:01:13] 2026-03-09 19:00:32,390 | INFO     | intersect: 37232219649.86671
[2026-03-09 20:01:13] 2026-03-09 19:00:32,390 | INFO     | chi2: 0.8879603023788121
[2026-03-09 20:01:13] 2026-03-09 19:00:32,390 | INFO     | current chi2=0.8879603023788121 (change=5.56154787137897 %)
[2026-03-09 20:01:13] 2026-03-09 19:00:32,390 | INFO     | left removable region: 20
[2026-03-09 20:01:13] 2026-03-09 19:00:32,391 | INFO     | sum of square deviations: 635130048.0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,391 | INFO     | sum of deviations: -4889661485.000001
[2026-03-09 20:01:13] 2026-03-09 19:00:32,391 | INFO     | mean x: 1773078306.0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,391 | INFO     | mean y: 2342845.346456693
[2026-03-09 20:01:13] 2026-03-09 19:00:32,392 | INFO     | intersect: 13652701114.551264
[2026-03-09 20:01:13] 2026-03-09 19:00:32,392 | INFO     | chi2: 0.013263379597870145
[2026-03-09 20:01:13] 2026-03-09 19:00:32,392 | INFO     | current memory leak: -7.70 B/s (using 127 data points, chi2=0.01)
[2026-03-09 20:01:13] 2026-03-09 19:00:32,392 | INFO     | could have reported an average CPU frequency of 2688 MHz (9 samples)
[2026-03-09 20:01:13] 2026-03-09 19:00:32,392 | INFO     | ..............................
[2026-03-09 20:01:13] 2026-03-09 19:00:32,392 | INFO     | . Timing measurements:
[2026-03-09 20:01:13] 2026-03-09 19:00:32,393 | INFO     | . get job = 0 s
[2026-03-09 20:01:13] 2026-03-09 19:00:32,393 | INFO     | . initial setup = 16 s
[2026-03-09 20:01:13] 2026-03-09 19:00:32,393 | INFO     | . payload setup = 18 s
[2026-03-09 20:01:13] 2026-03-09 19:00:32,393 | INFO     | . stage-in = 0 s
[2026-03-09 20:01:13] 2026-03-09 19:00:32,393 | INFO     | . payload execution = 9606 s
[2026-03-09 20:01:13] 2026-03-09 19:00:32,393 | INFO     | . stage-out = 0 s
[2026-03-09 20:01:13] 2026-03-09 19:00:32,393 | INFO     | . log creation = 0 s
[2026-03-09 20:01:13] 2026-03-09 19:00:32,393 | INFO     | ..............................
[2026-03-09 20:01:13] 2026-03-09 19:00:32,488 | INFO     | 
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | job summary report
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | --------------------------------------------------
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | PanDA job id: 7039267268
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | task id: 48955006
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | errors: (none)
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | pilot state: finished 
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | transexitcode: 0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | exeerrorcode: 0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | exeerrordiag: 
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | exitcode: 0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,489 | INFO     | exitmsg: OK
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | cpuconsumptiontime: 35415 s
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | nevents: 400
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | neventsw: 0
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | pid: 2142998
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | pgrp: 2142998
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | corecount: 4
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | event service: False
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | sizes: {0: 2280239, 11: 2280239, 9628: 2308946, 9629: 2318022, 9631: 2318224}
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | --------------------------------------------------
[2026-03-09 20:01:13] 2026-03-09 19:00:32,490 | INFO     | 
[2026-03-09 20:01:13] 2026-03-09 19:00:32,491 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/4
[2026-03-09 20:01:13] 2026-03-09 19:00:32,546 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,546 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,546 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,546 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,547 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 20:01:13] 2026-03-09 19:00:32,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,548 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 20:01:13] 2026-03-09 19:00:32,548 | INFO     | job 7039267268 has completed (purged errors)
[2026-03-09 20:01:13] 2026-03-09 19:00:32,548 | INFO     | overall cleanup function is called
[2026-03-09 20:01:13] 2026-03-09 19:00:33,557 | INFO     | --- collectZombieJob: --- 10, [2142998]
[2026-03-09 20:01:13] 2026-03-09 19:00:33,557 | INFO     | zombie collector waiting for pid 2142998
[2026-03-09 20:01:13] 2026-03-09 19:00:33,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 20:01:13] 2026-03-09 19:00:33,557 | INFO     | collected zombie processes
[2026-03-09 20:01:13] 2026-03-09 19:00:33,557 | INFO     | will attempt to kill all subprocesses of pid=2142998
[2026-03-09 20:01:13] 2026-03-09 19:00:34,377 | INFO     | process IDs to be killed: [2142998] (in reverse order)
[2026-03-09 20:01:13] 2026-03-09 19:00:34,741 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 20:01:13] 2026-03-09 19:00:34,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 20:01:13] 2026-03-09 19:00:34,767 | INFO     | did not find any defunct processes belonging to 2142998
[2026-03-09 20:01:13] 2026-03-09 19:00:34,791 | INFO     | did not find any defunct processes belonging to 2142998
[2026-03-09 20:01:13] 2026-03-09 19:00:34,792 | INFO     | ready for new job
[2026-03-09 20:01:13] 2026-03-09 19:00:34,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 20:01:13] 2026-03-09 19:00:34,794 | INFO     | **************************************
[2026-03-09 20:01:13] 2026-03-09 19:00:34,794 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 20:01:13] 2026-03-09 19:00:34,794 | INFO     | **************************************
[2026-03-09 20:01:13] 2026-03-09 19:00:34,794 | INFO     | 
[2026-03-09 20:01:13] 2026-03-09 19:00:34,803 | INFO     | architecture information:
[2026-03-09 20:01:13] 2026-03-09 19:00:34,803 | INFO     | executing command: cat /etc/os-release
[2026-03-09 20:01:13] 2026-03-09 19:00:34,837 | INFO     | cat /etc/os-release:
[2026-03-09 20:01:13] NAME="CentOS Linux"
[2026-03-09 20:01:13] VERSION="7 (Core)"
[2026-03-09 20:01:13] ID="centos"
[2026-03-09 20:01:13] ID_LIKE="rhel fedora"
[2026-03-09 20:01:13] VERSION_ID="7"
[2026-03-09 20:01:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 20:01:13] ANSI_COLOR="0;31"
[2026-03-09 20:01:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 20:01:13] HOME_URL="https://www.centos.org/"
[2026-03-09 20:01:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 20:01:13] 
[2026-03-09 20:01:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 20:01:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 20:01:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 20:01:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 20:01:13] 
[2026-03-09 20:01:13] 2026-03-09 19:00:34,837 | INFO     | **************************************
[2026-03-09 20:01:13] 2026-03-09 19:00:35,339 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/4
[2026-03-09 20:01:13] 2026-03-09 19:00:35,370 | INFO     | sufficient remaining disk space (59337867264 B)
[2026-03-09 20:01:13] 2026-03-09 19:00:35,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 20:01:13] 2026-03-09 19:00:35,371 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 20:01:13] 2026-03-09 19:00:35,371 | INFO     | update_server=False
[2026-03-09 20:01:13] 2026-03-09 19:00:35,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 20:01:13] 2026-03-09 19:00:35,954 | INFO     | all data control threads have been joined
[2026-03-09 20:01:13] 2026-03-09 19:00:36,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 20:01:13] 2026-03-09 19:00:36,376 | INFO     | [job] retrieve thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:36,560 | INFO     | all job control threads have been joined
[2026-03-09 20:01:13] 2026-03-09 19:00:36,597 | INFO     | [data] copytool_in thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:36,659 | INFO     | all payload control threads have been joined
[2026-03-09 20:01:13] 2026-03-09 19:00:36,709 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:36,830 | INFO     | [job] validate thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:36,847 | WARNING  | process 2142998 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 20:01:13] 2026-03-09 19:00:36,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 20:01:13] 2026-03-09 19:00:36,959 | INFO     | [data] control thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:37,008 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:37,198 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:37,214 | INFO     | [payload] validate_post thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:37,233 | INFO     | [payload] failed_post thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:37,288 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:37,379 | INFO     | using path: /var/lib/boinc/var/slot28/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:01:13] 2026-03-09 19:00:37,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:01:13] 2026-03-09 19:00:37,565 | INFO     | [job] control thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:37,664 | INFO     | [payload] control thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:38,160 | INFO     | number of running child processes to parent process 2142998: 1
[2026-03-09 20:01:13] 2026-03-09 19:00:38,160 | INFO     | maximum number of monitored processes: 6
[2026-03-09 20:01:13] 2026-03-09 19:00:38,160 | INFO     | aborting job monitoring since job object (job id=7039267268) has expired
[2026-03-09 20:01:13] 2026-03-09 19:00:38,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:01:13] 2026-03-09 19:00:38,161 | INFO     | will abort loop
[2026-03-09 20:01:13] 2026-03-09 19:00:38,264 | INFO     | [data] copytool_out thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:38,514 | INFO     | [job] queue monitor thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:39,166 | INFO     | [job] job monitor thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:00:40,854 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 20:01:13] 2026-03-09 19:01:05,479 | INFO     | PID=2137061 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 20:01:13] 2026-03-09 19:01:05,480 | INFO     | .. there are 29 such processes running
[2026-03-09 20:01:13] 2026-03-09 19:01:05,480 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 20:01:13] 2026-03-09 19:01:05,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 20:01:13] 2026-03-09 19:01:05,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 20:01:13] 2026-03-09 19:01:06,058 | INFO     | [monitor] cgroup control has ended
[2026-03-09 20:01:13] 2026-03-09 19:01:07,793 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22718138799936)>', '<ExcThread(monitor, started 22717901584128)>']
[2026-03-09 20:01:13] 2026-03-09 19:01:08,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 20:01:13] 2026-03-09 19:01:08,495 | INFO     | [monitor] control thread has ended
[2026-03-09 20:01:13] 2026-03-09 19:01:12,818 | INFO     | all workflow threads have been joined
[2026-03-09 20:01:13] 2026-03-09 19:01:12,818 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 20:01:13] 2026-03-09 19:01:12,818 | INFO     | traces error code: 0
[2026-03-09 20:01:13] 2026-03-09 19:01:12,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 20:01:13] 2026-03-09 19:01:12,953 [wrapper] ==== pilot stdout END ====
[2026-03-09 20:01:13] 2026-03-09 19:01:12,957 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 20:01:13] 2026-03-09 19:01:12,961 [wrapper] pilotpid: 2137061
[2026-03-09 20:01:13] 2026-03-09 19:01:12,964 [wrapper] Pilot exit status: 0
[2026-03-09 20:01:13] 2026-03-09 19:01:12,981 [wrapper] pandaids: 7039267268
[2026-03-09 20:01:13] 2026-03-09 19:01:13,163 [wrapper] cleanup supervisor_pilot 2510653 2137062
[2026-03-09 20:01:13] 2026-03-09 19:01:13,167 [wrapper] Test setup, not cleaning
[2026-03-09 20:01:13] 2026-03-09 19:01:13,171 [wrapper] apfmon messages muted
[2026-03-09 20:01:13] 2026-03-09 19:01:13,175 [wrapper] ==== wrapper stdout END ====
[2026-03-09 20:01:13] 2026-03-09 19:01:13,179 [wrapper] ==== wrapper stderr END ====
[2026-03-09 20:01:13]  *** Error codes and diagnostics ***
[2026-03-09 20:01:13]     "exeErrorCode": 0,
[2026-03-09 20:01:13]     "exeErrorDiag": "",
[2026-03-09 20:01:13]     "pilotErrorCode": 0,
[2026-03-09 20:01:13]     "pilotErrorDiag": "",
[2026-03-09 20:01:13]  *** Listing of results directory ***
[2026-03-09 20:01:13] total 619292
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc    584627 Mar  7 21:25 pilot3.tar.gz
[2026-03-09 20:01:13] -rwx------. 1 boinc boinc     36322 Mar  7 21:26 runpilot2-wrapper.sh
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc      5111 Mar  7 21:27 queuedata.json
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc       100 Mar  9 17:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 20:01:13] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 17:18 run_atlas
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc       105 Mar  9 17:18 job.xml
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc      6617 Mar  9 17:18 init_data.xml
[2026-03-09 20:01:13] -rw-r--r--. 2 boinc boinc 440517011 Mar  9 17:18 EVNT.46701403._000392.pool.root.1
[2026-03-09 20:01:13] drwxrwx--x. 2 boinc boinc      4096 Mar  9 17:18 shared
[2026-03-09 20:01:13] -rw-r--r--. 2 boinc boinc    597957 Mar  9 17:18 input.tar.gz
[2026-03-09 20:01:13] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:18 start_atlas.sh
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc         0 Mar  9 17:18 boinc_lockfile
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc      2563 Mar  9 17:18 pandaJob.out
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc   1002608 Mar  9 17:19 agis_schedconf.cvmfs.json
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc   1511578 Mar  9 17:19 agis_ddmendpoints.agis.ALL.json
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc       443 Mar  9 17:19 workernode_map.json
[2026-03-09 20:01:13] drwx------. 5 boinc boinc      4096 Mar  9 17:19 pilot3
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc 186342238 Mar  9 19:59 HITS.48955006._019576.pool.root.1
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc       530 Mar  9 20:00 boinc_task_state.xml
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc      1025 Mar  9 20:00 memory_monitor_summary.json
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc    347294 Mar  9 20:00 log.48955006._019576.job.log.tgz.1
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc      6352 Mar  9 20:00 heartbeat.json
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc        95 Mar  9 20:00 pilot_heartbeat.json
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc      8192 Mar  9 20:00 boinc_mmap_file
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc        27 Mar  9 20:00 wrapper_checkpoint.txt
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc      5362 Mar  9 20:01 pilotlog.txt
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc   1332379 Mar  9 20:01 log.48955006._019576.job.log.1
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc       357 Mar  9 20:01 output.list
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc       620 Mar  9 20:01 runtime_log
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc   1699840 Mar  9 20:01 result.tar.gz
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc      9204 Mar  9 20:01 runtime_log.err
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc       663 Mar  9 20:01 asNKDmXPDJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmX0WLDm1YrNVm.diag
[2026-03-09 20:01:13] -rw-r--r--. 1 boinc boinc     20832 Mar  9 20:01 stderr.txt
[2026-03-09 20:01:13] HITS file was successfully produced:
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc 186342238 Mar  9 19:59 shared/HITS.pool.root.1
[2026-03-09 20:01:13]  *** Contents of shared directory: ***
[2026-03-09 20:01:13] total 614440
[2026-03-09 20:01:13] -rw-r--r--. 2 boinc boinc 440517011 Mar  9 17:18 ATLAS.root_0
[2026-03-09 20:01:13] -rw-r--r--. 2 boinc boinc    597957 Mar  9 17:18 input.tar.gz
[2026-03-09 20:01:13] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:18 start_atlas.sh
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc 186342238 Mar  9 19:59 HITS.pool.root.1
[2026-03-09 20:01:13] -rw-------. 1 boinc boinc   1699840 Mar  9 20:01 result.tar.gz
20:01:15 (2132452): run_atlas exited; CPU time 35982.771666
20:01:15 (2132452): called boinc_finish(0)

</stderr_txt>
]]>

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