Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:42:59 (2537933): wrapper (7.7.26015): starting
16:42:59 (2537933): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 16:42:59] Arguments: --nthreads 4
[2026-03-09 16:42:59] Threads: 4
[2026-03-09 16:42:59] Checking for CVMFS
[2026-03-09 16:42:59] No cvmfs_config command found, will try listing directly
[2026-03-09 16:42:59] CVMFS is ok
[2026-03-09 16:42:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 16:42:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 16:42:59] Further information can be found at the LHC@home message board.
[2026-03-09 16:42:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:42:59] Checking for apptainer binary...
[2026-03-09 16:42:59] which: no apptainer in ((null))
[2026-03-09 16:42:59] apptainer is not installed, using version from CVMFS
[2026-03-09 16:42:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:42:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-03-09 16:42:59] apptainer works
[2026-03-09 16:42:59] Set ATHENA_PROC_NUMBER=4
[2026-03-09 16:42:59] Set ATHENA_CORE_NUMBER=4
[2026-03-09 16:42:59] Starting ATLAS job with PandaID=7039377908
[2026-03-09 16:42:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 19:21:09]  *** The last 200 lines of the pilot log: ***
[2026-03-09 19:21:09] 2026-03-09 18:20:05,272 | INFO     | log transfer has been attempted: DONE
[2026-03-09 19:21:09] 2026-03-09 18:20:05,272 | INFO     | job 7039377908 has finished - writing final server update
[2026-03-09 19:21:09] 2026-03-09 18:20:05,273 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1934772/.job.ad'
[2026-03-09 19:21:09] 2026-03-09 18:20:05,273 | INFO     | total number of processed events: 400 (read)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,296 | INFO     | using path: /var/lib/boinc/var/slot16/slots/5/PanDA_Pilot-7039377908/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,297 | INFO     | extracted standard info from prmon json
[2026-03-09 19:21:09] 2026-03-09 18:20:05,297 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 19:21:09] 2026-03-09 18:20:05,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 19:21:09] 2026-03-09 18:20:05,297 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 19:21:09] 2026-03-09 18:20:05,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 19:21:09] 2026-03-09 18:20:05,300 | INFO     | fitting pss+swap vs Time
[2026-03-09 19:21:09] 2026-03-09 18:20:05,301 | INFO     | sum of square deviations: 1132458442.5
[2026-03-09 19:21:09] 2026-03-09 18:20:05,302 | INFO     | sum of deviations: 5730804819.999998
[2026-03-09 19:21:09] 2026-03-09 18:20:05,302 | INFO     | mean x: 1773075723.5
[2026-03-09 19:21:09] 2026-03-09 18:20:05,302 | INFO     | mean y: 2298172.4675324676
[2026-03-09 19:21:09] 2026-03-09 18:20:05,302 | INFO     | intersect: -8970349759.784325
[2026-03-09 19:21:09] 2026-03-09 18:20:05,302 | INFO     | chi2: 2.1373001671787857
[2026-03-09 19:21:09] 2026-03-09 18:20:05,303 | INFO     | sum of square deviations: 1025693650.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,303 | INFO     | sum of deviations: 14780728037.000006
[2026-03-09 19:21:09] 2026-03-09 18:20:05,303 | INFO     | mean x: 1773075571.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,304 | INFO     | mean y: 2310744.932885906
[2026-03-09 19:21:09] 2026-03-09 18:20:05,304 | INFO     | intersect: -25548542381.631264
[2026-03-09 19:21:09] 2026-03-09 18:20:05,304 | INFO     | chi2: 1.3723330930979092
[2026-03-09 19:21:09] 2026-03-09 18:20:05,304 | INFO     | current chi2=1.3723330930979092 (change=35.79127938265336 %)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,304 | INFO     | sum of square deviations: 925859220.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,305 | INFO     | sum of deviations: 14226002881.999998
[2026-03-09 19:21:09] 2026-03-09 18:20:05,305 | INFO     | mean x: 1773075418.5
[2026-03-09 19:21:09] 2026-03-09 18:20:05,305 | INFO     | mean y: 2309897.4583333335
[2026-03-09 19:21:09] 2026-03-09 18:20:05,305 | INFO     | intersect: -27241330894.48016
[2026-03-09 19:21:09] 2026-03-09 18:20:05,305 | INFO     | chi2: 1.3738766088855214
[2026-03-09 19:21:09] 2026-03-09 18:20:05,306 | INFO     | current chi2=1.3738766088855214 (change=-0.11247384438772885 %)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,306 | INFO     | right removable region: 143
[2026-03-09 19:21:09] 2026-03-09 18:20:05,306 | INFO     | sum of square deviations: 1025693650.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,307 | INFO     | sum of deviations: -14090828590.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,307 | INFO     | mean x: 1773075876.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,307 | INFO     | mean y: 2326020.697986577
[2026-03-09 19:21:09] 2026-03-09 18:20:05,307 | INFO     | intersect: 24360581768.67897
[2026-03-09 19:21:09] 2026-03-09 18:20:05,307 | INFO     | chi2: 0.8026533563233761
[2026-03-09 19:21:09] 2026-03-09 18:20:05,307 | INFO     | current chi2=0.8026533563233761 (change=62.445454847698336 %)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,308 | INFO     | sum of square deviations: 925859220.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,308 | INFO     | sum of deviations: -13018302495.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,308 | INFO     | mean x: 1773076028.5
[2026-03-09 19:21:09] 2026-03-09 18:20:05,309 | INFO     | mean y: 2324375.763888889
[2026-03-09 19:21:09] 2026-03-09 18:20:05,309 | INFO     | intersect: 24933155745.18768
[2026-03-09 19:21:09] 2026-03-09 18:20:05,309 | INFO     | chi2: 0.8030250716722543
[2026-03-09 19:21:09] 2026-03-09 18:20:05,309 | INFO     | current chi2=0.8030250716722543 (change=-0.04631081972682815 %)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,309 | INFO     | left removable region: 20
[2026-03-09 19:21:09] 2026-03-09 18:20:05,309 | INFO     | sum of square deviations: 576985702.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,310 | INFO     | sum of deviations: -1430982042.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,310 | INFO     | mean x: 1773075998.0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,310 | INFO     | mean y: 2334075.6178861787
[2026-03-09 19:21:09] 2026-03-09 18:20:05,310 | INFO     | intersect: 4399739251.2477455
[2026-03-09 19:21:09] 2026-03-09 18:20:05,310 | INFO     | chi2: 0.006880054273111321
[2026-03-09 19:21:09] 2026-03-09 18:20:05,311 | INFO     | current memory leak: -2.48 B/s (using 123 data points, chi2=0.01)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,311 | INFO     | could have reported an average CPU frequency of 2684 MHz (9 samples)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,311 | INFO     | ..............................
[2026-03-09 19:21:09] 2026-03-09 18:20:05,311 | INFO     | . Timing measurements:
[2026-03-09 19:21:09] 2026-03-09 18:20:05,311 | INFO     | . get job = 0 s
[2026-03-09 19:21:09] 2026-03-09 18:20:05,311 | INFO     | . initial setup = 18 s
[2026-03-09 19:21:09] 2026-03-09 18:20:05,311 | INFO     | . payload setup = 15 s
[2026-03-09 19:21:09] 2026-03-09 18:20:05,311 | INFO     | . stage-in = 0 s
[2026-03-09 19:21:09] 2026-03-09 18:20:05,311 | INFO     | . payload execution = 9348 s
[2026-03-09 19:21:09] 2026-03-09 18:20:05,312 | INFO     | . stage-out = 1 s
[2026-03-09 19:21:09] 2026-03-09 18:20:05,312 | INFO     | . log creation = 0 s
[2026-03-09 19:21:09] 2026-03-09 18:20:05,312 | INFO     | ..............................
[2026-03-09 19:21:09] 2026-03-09 18:20:05,431 | INFO     | 
[2026-03-09 19:21:09] 2026-03-09 18:20:05,431 | INFO     | job summary report
[2026-03-09 19:21:09] 2026-03-09 18:20:05,431 | INFO     | --------------------------------------------------
[2026-03-09 19:21:09] 2026-03-09 18:20:05,431 | INFO     | PanDA job id: 7039377908
[2026-03-09 19:21:09] 2026-03-09 18:20:05,431 | INFO     | task id: 48955015
[2026-03-09 19:21:09] 2026-03-09 18:20:05,431 | INFO     | errors: (none)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | pilot state: finished 
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | transexitcode: 0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | exeerrorcode: 0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | exeerrordiag: 
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | exitcode: 0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | exitmsg: OK
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | cpuconsumptiontime: 34562 s
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | nevents: 400
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | neventsw: 0
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | pid: 2547659
[2026-03-09 19:21:09] 2026-03-09 18:20:05,432 | INFO     | pgrp: 2547659
[2026-03-09 19:21:09] 2026-03-09 18:20:05,433 | INFO     | corecount: 4
[2026-03-09 19:21:09] 2026-03-09 18:20:05,433 | INFO     | event service: False
[2026-03-09 19:21:09] 2026-03-09 18:20:05,433 | INFO     | sizes: {0: 2280185, 1: 2280273, 9367: 2309011, 9370: 2318031, 9373: 2318087, 9376: 2318345}
[2026-03-09 19:21:09] 2026-03-09 18:20:05,433 | INFO     | --------------------------------------------------
[2026-03-09 19:21:09] 2026-03-09 18:20:05,433 | INFO     | 
[2026-03-09 19:21:09] 2026-03-09 18:20:05,433 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/5
[2026-03-09 19:21:09] 2026-03-09 18:20:05,466 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,466 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,466 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,466 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,470 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,471 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 19:21:09] 2026-03-09 18:20:05,471 | INFO     | job 7039377908 has completed (purged errors)
[2026-03-09 19:21:09] 2026-03-09 18:20:05,471 | INFO     | overall cleanup function is called
[2026-03-09 19:21:09] 2026-03-09 18:20:06,480 | INFO     | --- collectZombieJob: --- 10, [2547659]
[2026-03-09 19:21:09] 2026-03-09 18:20:06,480 | INFO     | zombie collector waiting for pid 2547659
[2026-03-09 19:21:09] 2026-03-09 18:20:06,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 19:21:09] 2026-03-09 18:20:06,480 | INFO     | collected zombie processes
[2026-03-09 19:21:09] 2026-03-09 18:20:06,480 | INFO     | will attempt to kill all subprocesses of pid=2547659
[2026-03-09 19:21:09] 2026-03-09 18:20:07,282 | INFO     | process IDs to be killed: [2547659] (in reverse order)
[2026-03-09 19:21:09] 2026-03-09 18:20:07,631 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 19:21:09] 2026-03-09 18:20:07,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 19:21:09] 2026-03-09 18:20:07,659 | INFO     | did not find any defunct processes belonging to 2547659
[2026-03-09 19:21:09] 2026-03-09 18:20:07,684 | INFO     | did not find any defunct processes belonging to 2547659
[2026-03-09 19:21:09] 2026-03-09 18:20:07,685 | INFO     | ready for new job
[2026-03-09 19:21:09] 2026-03-09 18:20:07,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 19:21:09] 2026-03-09 18:20:07,687 | INFO     | **************************************
[2026-03-09 19:21:09] 2026-03-09 18:20:07,690 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 19:21:09] 2026-03-09 18:20:07,690 | INFO     | **************************************
[2026-03-09 19:21:09] 2026-03-09 18:20:07,690 | INFO     | 
[2026-03-09 19:21:09] 2026-03-09 18:20:07,698 | INFO     | architecture information:
[2026-03-09 19:21:09] 2026-03-09 18:20:07,699 | INFO     | executing command: cat /etc/os-release
[2026-03-09 19:21:09] 2026-03-09 18:20:07,722 | INFO     | cat /etc/os-release:
[2026-03-09 19:21:09] NAME="CentOS Linux"
[2026-03-09 19:21:09] VERSION="7 (Core)"
[2026-03-09 19:21:09] ID="centos"
[2026-03-09 19:21:09] ID_LIKE="rhel fedora"
[2026-03-09 19:21:09] VERSION_ID="7"
[2026-03-09 19:21:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 19:21:09] ANSI_COLOR="0;31"
[2026-03-09 19:21:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 19:21:09] HOME_URL="https://www.centos.org/"
[2026-03-09 19:21:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 19:21:09] 
[2026-03-09 19:21:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 19:21:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 19:21:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 19:21:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 19:21:09] 
[2026-03-09 19:21:09] 2026-03-09 18:20:07,723 | INFO     | **************************************
[2026-03-09 19:21:09] 2026-03-09 18:20:08,226 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/5
[2026-03-09 19:21:09] 2026-03-09 18:20:08,252 | INFO     | sufficient remaining disk space (56086233088 B)
[2026-03-09 19:21:09] 2026-03-09 18:20:08,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 19:21:09] 2026-03-09 18:20:08,253 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 19:21:09] 2026-03-09 18:20:08,253 | INFO     | update_server=False
[2026-03-09 19:21:09] 2026-03-09 18:20:08,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 19:21:09] 2026-03-09 18:20:08,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:21:09] 2026-03-09 18:20:08,253 | INFO     | aborting loop
[2026-03-09 19:21:09] 2026-03-09 18:20:08,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 19:21:09] 2026-03-09 18:20:08,374 | INFO     | all data control threads have been joined
[2026-03-09 19:21:09] 2026-03-09 18:20:08,454 | INFO     | all payload control threads have been joined
[2026-03-09 19:21:09] 2026-03-09 18:20:08,923 | INFO     | all job control threads have been joined
[2026-03-09 19:21:09] 2026-03-09 18:20:09,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 19:21:09] 2026-03-09 18:20:09,258 | INFO     | [job] job monitor thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:09,259 | INFO     | [job] retrieve thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:09,379 | INFO     | [data] control thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:09,459 | INFO     | [payload] control thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:09,921 | INFO     | [payload] failed_post thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:09,928 | INFO     | [job] control thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:10,067 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:10,136 | INFO     | [payload] validate_post thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:10,144 | INFO     | [job] validate thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:10,151 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:10,167 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:10,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:21:09] 2026-03-09 18:20:10,621 | INFO     | [data] copytool_in thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:10,750 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:11,248 | INFO     | [data] copytool_out thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:11,420 | INFO     | [job] queue monitor thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:12,325 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 19:21:09] 2026-03-09 18:20:37,634 | INFO     | PID=2542431 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 19:21:09] 2026-03-09 18:20:37,634 | INFO     | .. there are 29 such processes running
[2026-03-09 19:21:09] 2026-03-09 18:20:37,635 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 19:21:09] 2026-03-09 18:20:37,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 19:21:09] 2026-03-09 18:20:37,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 19:21:09] 2026-03-09 18:21:02,646 | INFO     | [monitor] cgroup control has ended
[2026-03-09 19:21:09] 2026-03-09 18:21:04,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22878486558528)>', '<ExcThread(monitor, started 22878237222656)>']
[2026-03-09 19:21:09] 2026-03-09 18:21:04,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 19:21:09] 2026-03-09 18:21:04,773 | INFO     | [monitor] control thread has ended
[2026-03-09 19:21:09] 2026-03-09 18:21:09,026 | INFO     | all workflow threads have been joined
[2026-03-09 19:21:09] 2026-03-09 18:21:09,028 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 19:21:09] 2026-03-09 18:21:09,029 | INFO     | traces error code: 0
[2026-03-09 19:21:09] 2026-03-09 18:21:09,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 19:21:09] 2026-03-09 18:21:09,194 [wrapper] ==== pilot stdout END ====
[2026-03-09 19:21:09] 2026-03-09 18:21:09,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 19:21:09] 2026-03-09 18:21:09,205 [wrapper] pilotpid: 2542431
[2026-03-09 19:21:09] 2026-03-09 18:21:09,209 [wrapper] Pilot exit status: 0
[2026-03-09 19:21:09] 2026-03-09 18:21:09,300 [wrapper] pandaids: 7039377908
[2026-03-09 19:21:09] 2026-03-09 18:21:09,489 [wrapper] cleanup supervisor_pilot 2933995 2542432
[2026-03-09 19:21:09] 2026-03-09 18:21:09,494 [wrapper] Test setup, not cleaning
[2026-03-09 19:21:09] 2026-03-09 18:21:09,497 [wrapper] apfmon messages muted
[2026-03-09 19:21:09] 2026-03-09 18:21:09,499 [wrapper] ==== wrapper stdout END ====
[2026-03-09 19:21:09] 2026-03-09 18:21:09,504 [wrapper] ==== wrapper stderr END ====
[2026-03-09 19:21:09]  *** Error codes and diagnostics ***
[2026-03-09 19:21:09]     "exeErrorCode": 0,
[2026-03-09 19:21:09]     "exeErrorDiag": "",
[2026-03-09 19:21:09]     "pilotErrorCode": 0,
[2026-03-09 19:21:09]     "pilotErrorDiag": "",
[2026-03-09 19:21:09]  *** Listing of results directory ***
[2026-03-09 19:21:09] total 612928
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc      5111 Mar  8 01:05 queuedata.json
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc    584627 Mar  8 01:05 pilot3.tar.gz
[2026-03-09 19:21:09] -rwx------. 1 boinc boinc     36322 Mar  8 01:06 runpilot2-wrapper.sh
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc       100 Mar  9 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 19:21:09] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 16:42 run_atlas
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc       105 Mar  9 16:42 job.xml
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc      6617 Mar  9 16:42 init_data.xml
[2026-03-09 19:21:09] -rw-r--r--. 2 boinc boinc 438537344 Mar  9 16:42 EVNT.46701403._002208.pool.root.1
[2026-03-09 19:21:09] -rw-r--r--. 2 boinc boinc     15845 Mar  9 16:42 start_atlas.sh
[2026-03-09 19:21:09] drwxrwx--x. 2 boinc boinc      4096 Mar  9 16:42 shared
[2026-03-09 19:21:09] -rw-r--r--. 2 boinc boinc    597958 Mar  9 16:42 input.tar.gz
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc         0 Mar  9 16:42 boinc_lockfile
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc      2570 Mar  9 16:42 pandaJob.out
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc   1002554 Mar  9 16:43 agis_schedconf.cvmfs.json
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc   1511578 Mar  9 16:43 agis_ddmendpoints.agis.ALL.json
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc       443 Mar  9 16:43 workernode_map.json
[2026-03-09 19:21:09] drwx------. 5 boinc boinc      4096 Mar  9 16:43 pilot3
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc 181825823 Mar  9 19:19 HITS.48955015._007944.pool.root.1
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc       530 Mar  9 19:19 boinc_task_state.xml
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc      1027 Mar  9 19:19 memory_monitor_summary.json
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc    369772 Mar  9 19:19 log.48955015._007944.job.log.tgz.1
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc      6350 Mar  9 19:20 heartbeat.json
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc        95 Mar  9 19:20 pilot_heartbeat.json
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc      8192 Mar  9 19:20 boinc_mmap_file
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc        27 Mar  9 19:20 wrapper_checkpoint.txt
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc      4830 Mar  9 19:21 pilotlog.txt
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc   1297163 Mar  9 19:21 log.48955015._007944.job.log.1
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc       357 Mar  9 19:21 output.list
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc       620 Mar  9 19:21 runtime_log
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc   1689600 Mar  9 19:21 result.tar.gz
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc      9204 Mar  9 19:21 runtime_log.err
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc       663 Mar  9 19:21 gdJLDmHqGJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfZXLDmatibvn.diag
[2026-03-09 19:21:09] -rw-r--r--. 1 boinc boinc     20880 Mar  9 19:21 stderr.txt
[2026-03-09 19:21:09] HITS file was successfully produced:
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc 181825823 Mar  9 19:19 shared/HITS.pool.root.1
[2026-03-09 19:21:09]  *** Contents of shared directory: ***
[2026-03-09 19:21:09] total 608088
[2026-03-09 19:21:09] -rw-r--r--. 2 boinc boinc 438537344 Mar  9 16:42 ATLAS.root_0
[2026-03-09 19:21:09] -rw-r--r--. 2 boinc boinc     15845 Mar  9 16:42 start_atlas.sh
[2026-03-09 19:21:09] -rw-r--r--. 2 boinc boinc    597958 Mar  9 16:42 input.tar.gz
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc 181825823 Mar  9 19:19 HITS.pool.root.1
[2026-03-09 19:21:09] -rw-------. 1 boinc boinc   1689600 Mar  9 19:21 result.tar.gz
19:21:11 (2537933): run_atlas exited; CPU time 35075.869831
19:21:11 (2537933): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN