Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-07 15:32:31 (10456): vboxwrapper version 26210
2026-03-07 15:32:31 (10456): BOINC client version: 8.0.2
2026-03-07 15:32:31 (10456): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2026-03-07 15:32:32 (10456): Successfully copied 'init_data.xml' to the shared directory.
2026-03-07 15:32:32 (10456): Create VM. (boinc_76355dc87f55e9bb, slot#5)
2026-03-07 15:32:33 (10456): Setting Memory Size for VM. (4600MB)
2026-03-07 15:32:33 (10456): Setting CPU Count for VM. (6)
2026-03-07 15:32:33 (10456): Setting Chipset Options for VM.
2026-03-07 15:32:34 (10456): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-07 15:32:34 (10456): Setting Boot Options for VM.
2026-03-07 15:32:34 (10456): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-07 15:32:35 (10456): Enabling VM Network Access.
2026-03-07 15:32:35 (10456): Disabling USB Support for VM.
2026-03-07 15:32:35 (10456): Disabling COM Port Support for VM.
2026-03-07 15:32:35 (10456): Disabling LPT Port Support for VM.
2026-03-07 15:32:36 (10456): Disabling Audio Support for VM.
2026-03-07 15:32:36 (10456): Disabling Clipboard Support for VM.
2026-03-07 15:32:36 (10456): Disabling Drag and Drop Support for VM.
2026-03-07 15:32:37 (10456): Adding storage controller(s) to VM.
2026-03-07 15:32:37 (10456): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-07 15:32:37 (10456): Adding VirtualBox Guest Additions to VM.
2026-03-07 15:32:38 (10456): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-07 15:32:38 (10456): forwarding host port 5677 to guest port 80
2026-03-07 15:32:38 (10456): Enabling remote desktop for VM.
2026-03-07 15:32:38 (10456): Required extension pack not installed, remote desktop not enabled.
2026-03-07 15:32:38 (10456): Enabling shared directory for VM.
2026-03-07 15:32:39 (10456): Starting VM using VBoxManage interface. (boinc_76355dc87f55e9bb, slot#5)
2026-03-07 15:32:49 (10456): Successfully started VM. (PID = '11628')
2026-03-07 15:32:49 (10456): Reporting VM Process ID to BOINC.
2026-03-07 15:32:49 (10456): Guest Log: BIOS: VirtualBox 6.0.14
2026-03-07 15:32:49 (10456): Guest Log: CPUID EDX: 0x178bfbff
2026-03-07 15:32:49 (10456): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-07 15:32:49 (10456): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-07 15:32:49 (10456): Detected: Web Application Enabled (http://localhost:5677)
2026-03-07 15:32:49 (10456): Preference change detected
2026-03-07 15:32:49 (10456): Setting CPU throttle for VM. (100%)
2026-03-07 15:32:49 (10456): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-07 15:32:51 (10456): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-07 15:32:51 (10456): Guest Log: BIOS: Booting from Hard Disk...
2026-03-07 15:32:55 (10456): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-07 15:32:55 (10456): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-07 15:32:55 (10456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-07 15:33:04 (10456): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-07 15:33:04 (10456): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-07 15:33:20 (10456): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-07 15:33:20 (10456): Guest Log: 00:00:00.000408 main     Log opened 2026-03-07T15:33:18.130980000Z
2026-03-07 15:33:20 (10456): Guest Log: 00:00:00.000604 main     OS Product: Linux
2026-03-07 15:33:20 (10456): Guest Log: 00:00:00.000762 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-07 15:33:20 (10456): Guest Log: 00:00:00.000836 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-07 15:33:20 (10456): Guest Log: 00:00:00.000908 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-07 15:33:20 (10456): Guest Log: 00:00:00.000910 main     Process ID: 1336
2026-03-07 15:33:20 (10456): Guest Log: 00:00:00.000912 main     Package type: LINUX_64BITS_GENERIC
2026-03-07 15:33:20 (10456): Guest Log: 00:00:00.002524 main     5.2.32 r132073 started. Verbose level = 0
2026-03-07 15:33:20 (10456): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-07 15:33:20 (10456): Guest Log: [INFO] Mounting shared directory
2026-03-07 15:33:20 (10456): Guest Log: [INFO] Checking for init_data.xml
2026-03-07 15:33:30 (10456): Guest Log: 00:00:10.005860 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 775 714 000ns (GuestNow=1 772 926 409 911 496 000 ns GuestLast=1 772 897 598 135 782 000 ns fSetTimeLastLoop=true )
2026-03-07 15:33:31 (10456): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-07 15:33:31 (10456): Guest Log: [INFO] Detected branch: prod
2026-03-07 15:33:32 (10456): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-07 15:33:32 (10456): Guest Log: Copying input files
2026-03-07 15:33:41 (10456): Guest Log: Copied input files into RunAtlas.
2026-03-07 15:33:42 (10456): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-07 15:33:42 (10456): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-07 15:33:42 (10456): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-07 15:33:42 (10456): Guest Log: Further information can be found at the LHC@home message board.
2026-03-07 15:33:55 (10456): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-07 15:33:55 (10456): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-07 15:33:55 (10456): Guest Log: 2.6.3.0 1617 0 30168 157020 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-07 15:33:58 (10456): Guest Log: copied the webapp to /var/www
2026-03-07 15:33:58 (10456): Guest Log: ATHENA_PROC_NUMBER=6
2026-03-07 15:33:58 (10456): Guest Log: ATHENA_CORE_NUMBER=6
2026-03-07 15:33:58 (10456): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-07 15:33:58 (10456): Guest Log:  *** Starting ATLAS job. (PandaID=7039181956 taskID=48955015) ***
2026-03-07 17:12:55 (10456): Status Report: Elapsed Time: '6000.000000'
2026-03-07 17:12:55 (10456): Status Report: CPU Time: '29242.250000'
2026-03-07 18:53:01 (10456): Status Report: Elapsed Time: '12000.000000'
2026-03-07 18:53:01 (10456): Status Report: CPU Time: '65002.343750'
2026-03-07 20:33:25 (10456): Status Report: Elapsed Time: '18000.000000'
2026-03-07 20:33:25 (10456): Status Report: CPU Time: '100874.203125'
2026-03-07 22:13:49 (10456): Status Report: Elapsed Time: '24000.000000'
2026-03-07 22:13:49 (10456): Status Report: CPU Time: '136742.984375'
2026-03-07 22:40:04 (10456): Guest Log:  *** Job finished ***
2026-03-07 22:40:04 (10456): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:39:56,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:39:56,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:39:56,606 | INFO     | [monitor] cgroup control has ended
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:39:58,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312612669248)>', '<ExcThread(monitor, started 140311875544832)>']
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:39:59,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:39:59,076 | INFO     | [monitor] control thread has ended
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,414 | INFO     | all workflow threads have been joined
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,415 | INFO     | end of generic workflow (traces error code: 0)
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,415 | INFO     | traces error code: 0
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,416 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,645 [wrapper] ==== pilot stdout END ====
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,657 [wrapper] ==== wrapper stdout RESUME ====
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,672 [wrapper] pilotpid: 6055
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,685 [wrapper] Pilot exit status: 0
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,763 [wrapper] pandaids: 7039181956
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,857 [wrapper] cleanup supervisor_pilot 31952 6056
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,876 [wrapper] Test setup, not cleaning
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,889 [wrapper] apfmon messages muted
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,903 [wrapper] ==== wrapper stdout END ====
2026-03-07 22:40:04 (10456): Guest Log: 2026-03-08 06:40:03,916 [wrapper] ==== wrapper stderr END ====
2026-03-07 22:40:04 (10456): Guest Log:  *** Error codes and diagnostics ***
2026-03-07 22:40:04 (10456): Guest Log:     "exeErrorCode": 0,
2026-03-07 22:40:04 (10456): Guest Log:     "exeErrorDiag": "",
2026-03-07 22:40:04 (10456): Guest Log:     "pilotErrorCode": 0,
2026-03-07 22:40:04 (10456): Guest Log:     "pilotErrorDiag": "",
2026-03-07 22:40:04 (10456): Guest Log:  *** Listing of results directory ***
2026-03-07 22:40:04 (10456): Guest Log: total 188676
2026-03-07 22:40:04 (10456): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  7 18:53 pilot3.tar.gz
2026-03-07 22:40:04 (10456): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  7 18:56 runpilot2-wrapper.sh
2026-03-07 22:40:04 (10456): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  7 18:56 queuedata.json
2026-03-07 22:40:04 (10456): Guest Log: -rwxr-xr-x. 1 atlas atlas      9204 Mar  7 23:33 init_data.xml
2026-03-07 22:40:04 (10456): Guest Log: -rwxr-xr-x. 1 atlas atlas    597954 Mar  7 23:33 input.tar.gz
2026-03-07 22:40:04 (10456): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  7 23:33 start_atlas.sh
2026-03-07 22:40:05 (10456): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  7 23:33 EVNT.46701403._002204.pool.root.1 -> /data/./ATLAS.root_0
2026-03-07 22:40:05 (10456): Guest Log: -rw-r--r--. 1 atlas atlas      2570 Mar  7 23:33 pandaJob.out
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas    999177 Mar  7 23:35 agis_schedconf.cvmfs.json
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas       429 Mar  7 23:35 workernode_map.json
2026-03-07 22:40:05 (10456): Guest Log: drwx------. 5 atlas atlas      4096 Mar  7 23:35 pilot3
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas 181181646 Mar  8 06:37 HITS.48955015._007730.pool.root.1
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas      1031 Mar  8 06:39 memory_monitor_summary.json
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas        95 Mar  8 06:39 pilot_heartbeat.json
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  8 06:39 agis_ddmendpoints.agis.ALL.json
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas    606794 Mar  8 06:39 log.48955015._007730.job.log.tgz.1
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas      6385 Mar  8 06:39 heartbeat.json
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas      4802 Mar  8 06:40 pilotlog.txt
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas   3471952 Mar  8 06:40 log.48955015._007730.job.log.1
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas       357 Mar  8 06:40 output.list
2026-03-07 22:40:05 (10456): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  8 06:40 runtime_log
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas   4096000 Mar  8 06:40 result.tar.gz
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas       667 Mar  8 06:40 XaLMDmA0BJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOrWLDm8kjmFo.diag
2026-03-07 22:40:05 (10456): Guest Log: -rw-r--r--. 1 atlas atlas      8776 Mar  8 06:40 runtime_log.err
2026-03-07 22:40:05 (10456): Guest Log: Looking for outputfile HITS.48955015._007730.pool.root.1
2026-03-07 22:40:05 (10456): Guest Log: HITS file was successfully produced
2026-03-07 22:40:05 (10456): Guest Log: -rw-------. 1 atlas atlas 181181646 Mar  8 06:37 /home/atlas/RunAtlas/HITS.48955015._007730.pool.root.1
2026-03-07 22:40:07 (10456): Guest Log: Successfully finished the ATLAS job!
2026-03-07 22:40:07 (10456): Guest Log: Copying the results back to the shared directory!
2026-03-07 22:40:07 (10456): Guest Log:  *** Contents of shared directory: ***
2026-03-07 22:40:07 (10456): Guest Log: total 608900
2026-03-07 22:40:07 (10456): Guest Log: -rwxrwxrwx. 1 root root 437605078 Mar  7 23:32 ATLAS.root_0
2026-03-07 22:40:07 (10456): Guest Log: -rwxrwxrwx. 1 root root 181181646 Mar  8 06:40 HITS.pool.root.1
2026-03-07 22:40:07 (10456): Guest Log: -rwxrwxrwx. 1 root root      9204 Mar  7 23:32 init_data.xml
2026-03-07 22:40:07 (10456): Guest Log: -rwxrwxrwx. 1 root root    597954 Mar  7 23:32 input.tar.gz
2026-03-07 22:40:07 (10456): Guest Log: -rwxrwxrwx. 1 root root   4096000 Mar  8 06:40 result.tar.gz
2026-03-07 22:40:07 (10456): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  7 23:32 start_atlas.sh
2026-03-07 22:40:07 (10456): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-07 22:40:07 (10456): VM Completion File Detected.
2026-03-07 22:40:07 (10456): Powering off VM.
2026-03-07 22:40:09 (10456): Successfully stopped VM.
2026-03-07 22:40:09 (10456): Deregistering VM. (boinc_76355dc87f55e9bb, slot#5)
2026-03-07 22:40:09 (10456): Removing network bandwidth throttle group from VM.
2026-03-07 22:40:09 (10456): Removing VM from VirtualBox.
2026-03-07 22:40:15 (10456): called boinc_finish(0)

</stderr_txt>
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