Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
17:21:10 (2818347): wrapper (7.7.26015): starting
17:21:10 (2818347): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 17:21:10] Arguments: --nthreads 4
[2026-03-07 17:21:10] Threads: 4
[2026-03-07 17:21:10] Checking for CVMFS
[2026-03-07 17:21:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 17:21:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 17:21:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 17:21:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 17:21:11] 2.13.3.0 9162 7688 50888 157016 4 3 3912876 4096001 2739 130560 2 6600680 99.991 267145 81 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 17:21:11] CVMFS is ok
[2026-03-07 17:21:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 17:21:11] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 17:21:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 17:21:11] Further information can be found at the LHC@home message board.
[2026-03-07 17:21:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 17:21:11] Checking for apptainer binary...
[2026-03-07 17:21:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 17:21:11] Running /usr/bin/apptainer --version
[2026-03-07 17:21:11] apptainer version 1.4.5
[2026-03-07 17:21:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 17:21:11] SETI64-Ubuntu
[2026-03-07 17:21:11] apptainer works
[2026-03-07 17:21:11] Set ATHENA_PROC_NUMBER=4
[2026-03-07 17:21:11] Set ATHENA_CORE_NUMBER=4
[2026-03-07 17:21:11] Starting ATLAS job with PandaID=7039173611
[2026-03-07 17:21:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/84 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 19:43:58]  *** The last 200 lines of the pilot log: ***
[2026-03-07 19:43:58] 2026-03-08 00:43:24,852 | INFO     | mean y: 2357412.192857143
[2026-03-07 19:43:58] 2026-03-08 00:43:24,852 | INFO     | intersect: 50709069337.97787
[2026-03-07 19:43:58] 2026-03-08 00:43:24,852 | INFO     | chi2: 2.250632944541049
[2026-03-07 19:43:58] 2026-03-08 00:43:24,853 | INFO     | sum of square deviations: 762879420.0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,853 | INFO     | sum of deviations: -15354622869.0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,853 | INFO     | mean x: 1772926201.0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,854 | INFO     | mean y: 2372584.8962962963
[2026-03-07 19:43:58] 2026-03-08 00:43:24,854 | INFO     | intersect: 35686404002.23862
[2026-03-07 19:43:58] 2026-03-08 00:43:24,854 | INFO     | chi2: 1.5979465510529354
[2026-03-07 19:43:58] 2026-03-08 00:43:24,854 | INFO     | current chi2=1.5979465510529354 (change=29.000126167672796 %)
[2026-03-07 19:43:58] 2026-03-08 00:43:24,854 | INFO     | sum of square deviations: 681212772.5
[2026-03-07 19:43:58] 2026-03-08 00:43:24,855 | INFO     | sum of deviations: -14480254053.999996
[2026-03-07 19:43:58] 2026-03-08 00:43:24,855 | INFO     | mean x: 1772926048.5
[2026-03-07 19:43:58] 2026-03-08 00:43:24,855 | INFO     | mean y: 2374218.4
[2026-03-07 19:43:58] 2026-03-08 00:43:24,856 | INFO     | intersect: 37688719274.75949
[2026-03-07 19:43:58] 2026-03-08 00:43:24,856 | INFO     | chi2: 1.5929741917777818
[2026-03-07 19:43:58] 2026-03-08 00:43:24,856 | INFO     | current chi2=1.5929741917777818 (change=0.31117181434367536 %)
[2026-03-07 19:43:58] 2026-03-08 00:43:24,856 | INFO     | right removable region: 129
[2026-03-07 19:43:58] 2026-03-08 00:43:24,856 | INFO     | sum of square deviations: 762879420.0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,857 | INFO     | sum of deviations: -38685390286.0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,857 | INFO     | mean x: 1772926506.0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,857 | INFO     | mean y: 2381618.688888889
[2026-03-07 19:43:58] 2026-03-08 00:43:24,858 | INFO     | intersect: 89906961601.98994
[2026-03-07 19:43:58] 2026-03-08 00:43:24,858 | INFO     | chi2: 0.9280531372120066
[2026-03-07 19:43:58] 2026-03-08 00:43:24,858 | INFO     | current chi2=0.9280531372120066 (change=58.76479372333831 %)
[2026-03-07 19:43:58] 2026-03-08 00:43:24,858 | INFO     | sum of square deviations: 681212772.5
[2026-03-07 19:43:58] 2026-03-08 00:43:24,859 | INFO     | sum of deviations: -32908185480.5
[2026-03-07 19:43:58] 2026-03-08 00:43:24,859 | INFO     | mean x: 1772926658.5
[2026-03-07 19:43:58] 2026-03-08 00:43:24,859 | INFO     | mean y: 2370817.7
[2026-03-07 19:43:58] 2026-03-08 00:43:24,859 | INFO     | intersect: 85649325303.1887
[2026-03-07 19:43:58] 2026-03-08 00:43:24,860 | INFO     | chi2: 0.9185407553053914
[2026-03-07 19:43:58] 2026-03-08 00:43:24,860 | INFO     | current chi2=0.9185407553053914 (change=1.0249824633093347 %)
[2026-03-07 19:43:58] 2026-03-08 00:43:24,860 | INFO     | left removable region: 20
[2026-03-07 19:43:58] 2026-03-08 00:43:24,860 | INFO     | sum of square deviations: 401533110.0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,861 | INFO     | sum of deviations: -12338237894.999998
[2026-03-07 19:43:58] 2026-03-08 00:43:24,861 | INFO     | mean x: 1772926628.0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,861 | INFO     | mean y: 2363759.5688073393
[2026-03-07 19:43:58] 2026-03-08 00:43:24,861 | INFO     | intersect: 54480537444.035736
[2026-03-07 19:43:58] 2026-03-08 00:43:24,861 | INFO     | chi2: 0.17845047798039007
[2026-03-07 19:43:58] 2026-03-08 00:43:24,861 | INFO     | current memory leak: -30.73 B/s (using 109 data points, chi2=0.18)
[2026-03-07 19:43:58] 2026-03-08 00:43:24,862 | INFO     | could have reported an average CPU frequency of 2473 MHz (8 samples)
[2026-03-07 19:43:58] 2026-03-08 00:43:24,862 | INFO     | ..............................
[2026-03-07 19:43:58] 2026-03-08 00:43:24,862 | INFO     | . Timing measurements:
[2026-03-07 19:43:58] 2026-03-08 00:43:24,862 | INFO     | . get job = 0 s
[2026-03-07 19:43:58] 2026-03-08 00:43:24,862 | INFO     | . initial setup = 8 s
[2026-03-07 19:43:58] 2026-03-08 00:43:24,862 | INFO     | . payload setup = 7 s
[2026-03-07 19:43:58] 2026-03-08 00:43:24,862 | INFO     | . stage-in = 0 s
[2026-03-07 19:43:58] 2026-03-08 00:43:24,863 | INFO     | . payload execution = 8489 s
[2026-03-07 19:43:58] 2026-03-08 00:43:24,863 | INFO     | . stage-out = 0 s
[2026-03-07 19:43:58] 2026-03-08 00:43:24,863 | INFO     | . log creation = 0 s
[2026-03-07 19:43:58] 2026-03-08 00:43:24,863 | INFO     | ..............................
[2026-03-07 19:43:58] 2026-03-08 00:43:24,958 | INFO     | 
[2026-03-07 19:43:58] 2026-03-08 00:43:24,958 | INFO     | job summary report
[2026-03-07 19:43:58] 2026-03-08 00:43:24,958 | INFO     | --------------------------------------------------
[2026-03-07 19:43:58] 2026-03-08 00:43:24,958 | INFO     | PanDA job id: 7039173611
[2026-03-07 19:43:58] 2026-03-08 00:43:24,958 | INFO     | task id: 48955010
[2026-03-07 19:43:58] 2026-03-08 00:43:24,958 | INFO     | errors: (none)
[2026-03-07 19:43:58] 2026-03-08 00:43:24,958 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 19:43:58] 2026-03-08 00:43:24,958 | INFO     | pilot state: finished 
[2026-03-07 19:43:58] 2026-03-08 00:43:24,958 | INFO     | transexitcode: 0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | exeerrorcode: 0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | exeerrordiag: 
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | exitcode: 0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | exitmsg: OK
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | cpuconsumptiontime: 33105 s
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | nevents: 400
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | neventsw: 0
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | pid: 2827555
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | pgrp: 2827555
[2026-03-07 19:43:58] 2026-03-08 00:43:24,959 | INFO     | corecount: 4
[2026-03-07 19:43:58] 2026-03-08 00:43:24,960 | INFO     | event service: False
[2026-03-07 19:43:58] 2026-03-08 00:43:24,960 | INFO     | sizes: {0: 2295507, 1: 2295769, 11: 2295797, 8500: 2323697, 8501: 2332725, 8502: 2332781, 8504: 2333103}
[2026-03-07 19:43:58] 2026-03-08 00:43:24,960 | INFO     | --------------------------------------------------
[2026-03-07 19:43:58] 2026-03-08 00:43:24,960 | INFO     | 
[2026-03-07 19:43:58] 2026-03-08 00:43:24,960 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/84
[2026-03-07 19:43:58] 2026-03-08 00:43:24,991 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,993 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,993 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,993 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,994 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,994 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,994 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,994 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,994 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,994 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 19:43:58] 2026-03-08 00:43:24,995 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,995 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 19:43:58] 2026-03-08 00:43:24,995 | INFO     | job 7039173611 has completed (purged errors)
[2026-03-07 19:43:58] 2026-03-08 00:43:24,995 | INFO     | overall cleanup function is called
[2026-03-07 19:43:58] 2026-03-08 00:43:25,133 | WARNING  | process 2827555 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 19:43:58] 2026-03-08 00:43:25,460 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/84/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:43:58] 2026-03-08 00:43:25,461 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/84/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:43:58] 2026-03-08 00:43:25,461 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-07 19:43:58] 2026-03-08 00:43:25,461 | WARNING  | maxPSS not found in memory monitor output
[2026-03-07 19:43:58] 2026-03-08 00:43:25,462 | INFO     | skipping file size check of payload stdout file (/home/whitlerd/Desktop/BOINC/slots/84/PanDA_Pilot-7039173611/payload.stdout) since it has not been created yet
[2026-03-07 19:43:58] 2026-03-08 00:43:25,462 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/84
[2026-03-07 19:43:58] 2026-03-08 00:43:25,478 | INFO     | sufficient remaining disk space (378791788544 B)
[2026-03-07 19:43:58] 2026-03-08 00:43:25,479 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-07 19:43:58] 2026-03-08 00:43:25,479 | INFO     | output file size check: skipping output file /home/whitlerd/Desktop/BOINC/slots/84/PanDA_Pilot-7039173611/HITS.48955010._012357.pool.root.1 since it does not exist
[2026-03-07 19:43:58] 2026-03-08 00:43:25,983 | INFO     | number of running child processes to parent process 2827555: 1
[2026-03-07 19:43:58] 2026-03-08 00:43:25,983 | INFO     | maximum number of monitored processes: 6
[2026-03-07 19:43:58] 2026-03-08 00:43:25,983 | INFO     | aborting job monitoring since job object (job id=7039173611) has expired
[2026-03-07 19:43:58] 2026-03-08 00:43:26,006 | INFO     | --- collectZombieJob: --- 10, [2827555]
[2026-03-07 19:43:58] 2026-03-08 00:43:26,006 | INFO     | zombie collector waiting for pid 2827555
[2026-03-07 19:43:58] 2026-03-08 00:43:26,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 19:43:58] 2026-03-08 00:43:26,006 | INFO     | collected zombie processes
[2026-03-07 19:43:58] 2026-03-08 00:43:26,006 | INFO     | will attempt to kill all subprocesses of pid=2827555
[2026-03-07 19:43:58] 2026-03-08 00:43:26,511 | INFO     | process IDs to be killed: [2827555] (in reverse order)
[2026-03-07 19:43:58] 2026-03-08 00:43:26,661 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 19:43:58] 2026-03-08 00:43:26,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 19:43:58] 2026-03-08 00:43:26,677 | INFO     | did not find any defunct processes belonging to 2827555
[2026-03-07 19:43:58] 2026-03-08 00:43:26,692 | INFO     | did not find any defunct processes belonging to 2827555
[2026-03-07 19:43:58] 2026-03-08 00:43:26,692 | INFO     | ready for new job
[2026-03-07 19:43:58] 2026-03-08 00:43:26,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 19:43:58] 2026-03-08 00:43:26,694 | INFO     | **************************************
[2026-03-07 19:43:58] 2026-03-08 00:43:26,695 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 19:43:58] 2026-03-08 00:43:26,695 | INFO     | **************************************
[2026-03-07 19:43:58] 2026-03-08 00:43:26,695 | INFO     | 
[2026-03-07 19:43:58] 2026-03-08 00:43:26,704 | INFO     | architecture information:
[2026-03-07 19:43:58] 2026-03-08 00:43:26,704 | INFO     | executing command: cat /etc/os-release
[2026-03-07 19:43:58] 2026-03-08 00:43:26,728 | INFO     | cat /etc/os-release:
[2026-03-07 19:43:58] NAME="CentOS Linux"
[2026-03-07 19:43:58] VERSION="7 (Core)"
[2026-03-07 19:43:58] ID="centos"
[2026-03-07 19:43:58] ID_LIKE="rhel fedora"
[2026-03-07 19:43:58] VERSION_ID="7"
[2026-03-07 19:43:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 19:43:58] ANSI_COLOR="0;31"
[2026-03-07 19:43:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 19:43:58] HOME_URL="https://www.centos.org/"
[2026-03-07 19:43:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 19:43:58] 
[2026-03-07 19:43:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 19:43:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 19:43:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 19:43:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 19:43:58] 
[2026-03-07 19:43:58] 2026-03-08 00:43:26,729 | INFO     | **************************************
[2026-03-07 19:43:58] 2026-03-08 00:43:27,232 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/84
[2026-03-07 19:43:58] 2026-03-08 00:43:27,253 | INFO     | sufficient remaining disk space (378792837120 B)
[2026-03-07 19:43:58] 2026-03-08 00:43:27,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 19:43:58] 2026-03-08 00:43:27,254 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 19:43:58] 2026-03-08 00:43:27,254 | INFO     | update_server=False
[2026-03-07 19:43:58] 2026-03-08 00:43:27,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 19:43:58] 2026-03-08 00:43:27,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:43:58] 2026-03-08 00:43:27,256 | INFO     | aborting loop
[2026-03-07 19:43:58] 2026-03-08 00:43:27,400 | INFO     | all payload control threads have been joined
[2026-03-07 19:43:58] 2026-03-08 00:43:27,766 | INFO     | job.realtimelogging is not enabled
[2026-03-07 19:43:58] 2026-03-08 00:43:27,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 19:43:58] 2026-03-08 00:43:28,259 | INFO     | [job] retrieve thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:28,261 | INFO     | [job] job monitor thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:28,298 | INFO     | all data control threads have been joined
[2026-03-07 19:43:58] 2026-03-08 00:43:28,336 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:28,340 | INFO     | [job] validate thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:28,402 | INFO     | all job control threads have been joined
[2026-03-07 19:43:58] 2026-03-08 00:43:28,406 | INFO     | [payload] control thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:28,505 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:28,771 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:28,816 | INFO     | [payload] validate_post thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:28,833 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:28,991 | INFO     | [payload] failed_post thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:29,178 | INFO     | [data] copytool_in thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:29,303 | INFO     | [data] control thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:29,408 | INFO     | [job] control thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:29,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 19:43:58] 2026-03-08 00:43:29,833 | INFO     | [data] copytool_out thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:29,968 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:43:58] 2026-03-08 00:43:30,973 | INFO     | [job] queue monitor thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:33,838 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 19:43:58] 2026-03-08 00:43:42,906 | INFO     | [monitor] cgroup control has ended
[2026-03-07 19:43:58] 2026-03-08 00:43:42,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125066632697664)>', '<ExcThread(monitor, started 125066008319744)>']
[2026-03-07 19:43:58] 2026-03-08 00:43:47,948 | INFO     | all workflow threads have been joined
[2026-03-07 19:43:58] 2026-03-08 00:43:47,948 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 19:43:58] 2026-03-08 00:43:47,948 | INFO     | traces error code: 0
[2026-03-07 19:43:58] 2026-03-08 00:43:47,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 19:43:58] 2026-03-08 00:43:58,336 | INFO     | PID=2822580 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 19:43:58] 2026-03-08 00:43:58,336 | INFO     | .. there are 4 such processes running
[2026-03-07 19:43:58] 2026-03-08 00:43:58,336 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 19:43:58] 2026-03-08 00:43:58,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 19:43:58] 2026-03-08 00:43:58,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 19:43:58] 2026-03-08 00:43:58,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 19:43:58] 2026-03-08 00:43:58,336 | INFO     | [monitor] control thread has ended
[2026-03-07 19:43:58] 2026-03-08 00:43:58,475 [wrapper] ==== pilot stdout END ====
[2026-03-07 19:43:58] 2026-03-08 00:43:58,477 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 19:43:58] 2026-03-08 00:43:58,480 [wrapper] pilotpid: 2822580
[2026-03-07 19:43:58] 2026-03-08 00:43:58,482 [wrapper] Pilot exit status: 0
[2026-03-07 19:43:58] 2026-03-08 00:43:58,492 [wrapper] pandaids: 7039173611
[2026-03-07 19:43:58] 2026-03-08 00:43:58,567 [wrapper] cleanup supervisor_pilot 2868942 2822581
[2026-03-07 19:43:58] 2026-03-08 00:43:58,571 [wrapper] Test setup, not cleaning
[2026-03-07 19:43:58] 2026-03-08 00:43:58,574 [wrapper] apfmon messages muted
[2026-03-07 19:43:58] 2026-03-08 00:43:58,578 [wrapper] ==== wrapper stdout END ====
[2026-03-07 19:43:58] 2026-03-08 00:43:58,581 [wrapper] ==== wrapper stderr END ====
[2026-03-07 19:43:58]  *** Error codes and diagnostics ***
[2026-03-07 19:43:58]     "exeErrorCode": 0,
[2026-03-07 19:43:58]     "exeErrorDiag": "",
[2026-03-07 19:43:58]     "pilotErrorCode": 0,
[2026-03-07 19:43:58]     "pilotErrorDiag": "",
[2026-03-07 19:43:58]  *** Listing of results directory ***
[2026-03-07 19:43:58] total 613948
[2026-03-07 19:43:58] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 12:04 pilot3.tar.gz
[2026-03-07 19:43:58] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 12:05 runpilot2-wrapper.sh
[2026-03-07 19:43:58] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 12:05 queuedata.json
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 19:43:58] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 17:21 run_atlas
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 17:21 job.xml
[2026-03-07 19:43:58] -rw-r--r-- 2 whitlerd whitlerd 440752081 Mar  7 17:21 EVNT.46701403._001247.pool.root.1
[2026-03-07 19:43:58] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 17:21 start_atlas.sh
[2026-03-07 19:43:58] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 17:21 shared
[2026-03-07 19:43:58] -rw-r--r-- 2 whitlerd whitlerd    597960 Mar  7 17:21 input.tar.gz
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar  7 17:21 init_data.xml
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 17:21 boinc_setup_complete
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 17:21 boinc_lockfile
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd      2563 Mar  7 17:21 pandaJob.out
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd    999169 Mar  7 17:21 agis_schedconf.cvmfs.json
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 17:21 agis_ddmendpoints.agis.ALL.json
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd       424 Mar  7 17:21 workernode_map.json
[2026-03-07 19:43:58] drwx------ 5 whitlerd whitlerd      4096 Mar  7 17:21 pilot3
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd 180854428 Mar  7 19:42 HITS.48955010._012357.pool.root.1
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar  7 19:42 boinc_task_state.xml
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd      1034 Mar  7 19:43 memory_monitor_summary.json
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd    363912 Mar  7 19:43 log.48955010._012357.job.log.tgz.1
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd        95 Mar  7 19:43 pilot_heartbeat.json
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd      6293 Mar  7 19:43 heartbeat.json
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  7 19:43 wrapper_checkpoint.txt
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 19:43 boinc_mmap_file
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd       822 Mar  7 19:43 pilotlog.txt
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd   1206037 Mar  7 19:43 log.48955010._012357.job.log.1
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd       357 Mar  7 19:43 output.list
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 19:43 runtime_log
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd   1587200 Mar  7 19:43 result.tar.gz
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd       648 Mar  7 19:43 tn9NDmtGAJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWAULDmZ947mn.diag
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  7 19:43 runtime_log.err
[2026-03-07 19:43:58] -rw-rw-r-- 1 whitlerd whitlerd     21584 Mar  7 19:43 stderr.txt
[2026-03-07 19:43:58] HITS file was successfully produced:
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd 180854428 Mar  7 19:42 shared/HITS.pool.root.1
[2026-03-07 19:43:58]  *** Contents of shared directory: ***
[2026-03-07 19:43:58] total 609200
[2026-03-07 19:43:58] -rw-r--r-- 2 whitlerd whitlerd 440752081 Mar  7 17:21 ATLAS.root_0
[2026-03-07 19:43:58] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 17:21 start_atlas.sh
[2026-03-07 19:43:58] -rw-r--r-- 2 whitlerd whitlerd    597960 Mar  7 17:21 input.tar.gz
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd 180854428 Mar  7 19:42 HITS.pool.root.1
[2026-03-07 19:43:58] -rw------- 1 whitlerd whitlerd   1587200 Mar  7 19:43 result.tar.gz
19:44:00 (2818347): run_atlas exited; CPU time 33534.973508
19:44:00 (2818347): called boinc_finish(0)

</stderr_txt>
]]>

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