Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
17:15:56 (2803532): wrapper (7.7.26015): starting
17:15:56 (2803532): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 17:15:56] Arguments: --nthreads 4
[2026-03-07 17:15:56] Threads: 4
[2026-03-07 17:15:56] Checking for CVMFS
[2026-03-07 17:15:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 17:15:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 17:15:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 17:15:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 17:15:58] 2.13.3.0 9162 7683 50888 157015 1 50 3907279 4096001 2748 130560 2 6562083 99.991 265806 80 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 17:15:58] CVMFS is ok
[2026-03-07 17:15:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 17:15:58] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 17:15:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 17:15:58] Further information can be found at the LHC@home message board.
[2026-03-07 17:15:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 17:15:58] Checking for apptainer binary...
[2026-03-07 17:15:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 17:15:58] Running /usr/bin/apptainer --version
[2026-03-07 17:15:58] apptainer version 1.4.5
[2026-03-07 17:15:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 17:15:58] SETI64-Ubuntu
[2026-03-07 17:15:58] apptainer works
[2026-03-07 17:15:58] Set ATHENA_PROC_NUMBER=4
[2026-03-07 17:15:58] Set ATHENA_CORE_NUMBER=4
[2026-03-07 17:15:58] Starting ATLAS job with PandaID=7039181238
[2026-03-07 17:15:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/87 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 19:45:53]  *** The last 200 lines of the pilot log: ***
[2026-03-07 19:45:53] 2026-03-08 00:45:19,581 | INFO     | mean y: 2293696.156462585
[2026-03-07 19:45:53] 2026-03-08 00:45:19,581 | INFO     | intersect: -5658360571.214966
[2026-03-07 19:45:53] 2026-03-08 00:45:19,582 | INFO     | chi2: 1.8929860562450842
[2026-03-07 19:45:53] 2026-03-08 00:45:19,582 | INFO     | sum of square deviations: 887813855.5
[2026-03-07 19:45:53] 2026-03-08 00:45:19,583 | INFO     | sum of deviations: 11103485960.000002
[2026-03-07 19:45:53] 2026-03-08 00:45:19,583 | INFO     | mean x: 1772926104.5
[2026-03-07 19:45:53] 2026-03-08 00:45:19,583 | INFO     | mean y: 2305832.4647887326
[2026-03-07 19:45:53] 2026-03-08 00:45:19,583 | INFO     | intersect: -22170878318.109943
[2026-03-07 19:45:53] 2026-03-08 00:45:19,583 | INFO     | chi2: 1.2356420385925753
[2026-03-07 19:45:53] 2026-03-08 00:45:19,583 | INFO     | current chi2=1.2356420385925753 (change=34.72524351058415 %)
[2026-03-07 19:45:53] 2026-03-08 00:45:19,584 | INFO     | sum of square deviations: 797291228.0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,584 | INFO     | sum of deviations: 10628846851.0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,584 | INFO     | mean x: 1772925952.0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,585 | INFO     | mean y: 2305032.8248175182
[2026-03-07 19:45:53] 2026-03-08 00:45:19,585 | INFO     | intersect: -23632921042.89889
[2026-03-07 19:45:53] 2026-03-08 00:45:19,585 | INFO     | chi2: 1.2370231131776555
[2026-03-07 19:45:53] 2026-03-08 00:45:19,585 | INFO     | current chi2=1.2370231131776555 (change=-0.11176979593970957 %)
[2026-03-07 19:45:53] 2026-03-08 00:45:19,585 | INFO     | right removable region: 136
[2026-03-07 19:45:53] 2026-03-08 00:45:19,585 | INFO     | sum of square deviations: 887813855.5
[2026-03-07 19:45:53] 2026-03-08 00:45:19,586 | INFO     | sum of deviations: -9523622346.5
[2026-03-07 19:45:53] 2026-03-08 00:45:19,586 | INFO     | mean x: 1772926409.5
[2026-03-07 19:45:53] 2026-03-08 00:45:19,586 | INFO     | mean y: 2312993.767605634
[2026-03-07 19:45:53] 2026-03-08 00:45:19,586 | INFO     | intersect: 19020580694.3827
[2026-03-07 19:45:53] 2026-03-08 00:45:19,587 | INFO     | chi2: 0.691487724964754
[2026-03-07 19:45:53] 2026-03-08 00:45:19,587 | INFO     | current chi2=0.691487724964754 (change=63.471060830929474 %)
[2026-03-07 19:45:53] 2026-03-08 00:45:19,587 | INFO     | sum of square deviations: 797291228.0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,588 | INFO     | sum of deviations: -10238701403.999998
[2026-03-07 19:45:53] 2026-03-08 00:45:19,588 | INFO     | mean x: 1772926562.0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,588 | INFO     | mean y: 2314152.7372262776
[2026-03-07 19:45:53] 2026-03-08 00:45:19,588 | INFO     | intersect: 22769986794.857765
[2026-03-07 19:45:53] 2026-03-08 00:45:19,588 | INFO     | chi2: 0.6829448300629078
[2026-03-07 19:45:53] 2026-03-08 00:45:19,588 | INFO     | current chi2=0.6829448300629078 (change=1.2354369562064986 %)
[2026-03-07 19:45:53] 2026-03-08 00:45:19,589 | INFO     | left removable region: 20
[2026-03-07 19:45:53] 2026-03-08 00:45:19,589 | INFO     | sum of square deviations: 483971865.0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,589 | INFO     | sum of deviations: -1683098702.0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,589 | INFO     | mean x: 1772926531.5
[2026-03-07 19:45:53] 2026-03-08 00:45:19,590 | INFO     | mean y: 2326430.5862068967
[2026-03-07 19:45:53] 2026-03-08 00:45:19,590 | INFO     | intersect: 6167995469.85776
[2026-03-07 19:45:53] 2026-03-08 00:45:19,590 | INFO     | chi2: 0.0028663059855581785
[2026-03-07 19:45:53] 2026-03-08 00:45:19,590 | INFO     | current memory leak: -3.48 B/s (using 116 data points, chi2=0.00)
[2026-03-07 19:45:53] 2026-03-08 00:45:19,590 | INFO     | could have reported an average CPU frequency of 2498 MHz (8 samples)
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | ..............................
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | . Timing measurements:
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | . get job = 0 s
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | . initial setup = 8 s
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | . payload setup = 7 s
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | . stage-in = 0 s
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | . payload execution = 8913 s
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | . stage-out = 0 s
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | . log creation = 0 s
[2026-03-07 19:45:53] 2026-03-08 00:45:19,591 | INFO     | ..............................
[2026-03-07 19:45:53] 2026-03-08 00:45:19,682 | INFO     | 
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | job summary report
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | --------------------------------------------------
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | PanDA job id: 7039181238
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | task id: 48955006
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | errors: (none)
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | pilot state: finished 
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | transexitcode: 0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | exeerrorcode: 0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | exeerrordiag: 
[2026-03-07 19:45:53] 2026-03-08 00:45:19,683 | INFO     | exitcode: 0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | exitmsg: OK
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | cpuconsumptiontime: 34341 s
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | nevents: 400
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | neventsw: 0
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | pid: 2813062
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | pgrp: 2813062
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | corecount: 4
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | event service: False
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | sizes: {0: 2295558, 1: 2295848, 11: 2295848, 8924: 2323888, 8926: 2332972, 8928: 2333110}
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | --------------------------------------------------
[2026-03-07 19:45:53] 2026-03-08 00:45:19,684 | INFO     | 
[2026-03-07 19:45:53] 2026-03-08 00:45:19,685 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/87
[2026-03-07 19:45:53] 2026-03-08 00:45:19,709 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,709 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,709 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,709 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,709 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,710 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 19:45:53] 2026-03-08 00:45:19,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,711 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 19:45:53] 2026-03-08 00:45:19,711 | INFO     | job 7039181238 has completed (purged errors)
[2026-03-07 19:45:53] 2026-03-08 00:45:19,711 | INFO     | overall cleanup function is called
[2026-03-07 19:45:53] 2026-03-08 00:45:20,717 | INFO     | --- collectZombieJob: --- 10, [2813062]
[2026-03-07 19:45:53] 2026-03-08 00:45:20,718 | INFO     | zombie collector waiting for pid 2813062
[2026-03-07 19:45:53] 2026-03-08 00:45:20,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 19:45:53] 2026-03-08 00:45:20,718 | INFO     | collected zombie processes
[2026-03-07 19:45:53] 2026-03-08 00:45:20,718 | INFO     | will attempt to kill all subprocesses of pid=2813062
[2026-03-07 19:45:53] 2026-03-08 00:45:21,216 | INFO     | process IDs to be killed: [2813062] (in reverse order)
[2026-03-07 19:45:53] 2026-03-08 00:45:21,362 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 19:45:53] 2026-03-08 00:45:21,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 19:45:53] 2026-03-08 00:45:21,378 | INFO     | did not find any defunct processes belonging to 2813062
[2026-03-07 19:45:53] 2026-03-08 00:45:21,393 | INFO     | did not find any defunct processes belonging to 2813062
[2026-03-07 19:45:53] 2026-03-08 00:45:21,393 | INFO     | ready for new job
[2026-03-07 19:45:53] 2026-03-08 00:45:21,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 19:45:53] 2026-03-08 00:45:21,395 | INFO     | **************************************
[2026-03-07 19:45:53] 2026-03-08 00:45:21,395 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 19:45:53] 2026-03-08 00:45:21,396 | INFO     | **************************************
[2026-03-07 19:45:53] 2026-03-08 00:45:21,396 | INFO     | 
[2026-03-07 19:45:53] 2026-03-08 00:45:21,404 | INFO     | architecture information:
[2026-03-07 19:45:53] 2026-03-08 00:45:21,405 | INFO     | executing command: cat /etc/os-release
[2026-03-07 19:45:53] 2026-03-08 00:45:21,425 | INFO     | cat /etc/os-release:
[2026-03-07 19:45:53] NAME="CentOS Linux"
[2026-03-07 19:45:53] VERSION="7 (Core)"
[2026-03-07 19:45:53] ID="centos"
[2026-03-07 19:45:53] ID_LIKE="rhel fedora"
[2026-03-07 19:45:53] VERSION_ID="7"
[2026-03-07 19:45:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 19:45:53] ANSI_COLOR="0;31"
[2026-03-07 19:45:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 19:45:53] HOME_URL="https://www.centos.org/"
[2026-03-07 19:45:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 19:45:53] 
[2026-03-07 19:45:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 19:45:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 19:45:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 19:45:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 19:45:53] 
[2026-03-07 19:45:53] 2026-03-08 00:45:21,426 | INFO     | **************************************
[2026-03-07 19:45:53] 2026-03-08 00:45:21,929 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/87
[2026-03-07 19:45:53] 2026-03-08 00:45:21,952 | INFO     | sufficient remaining disk space (379813101568 B)
[2026-03-07 19:45:53] 2026-03-08 00:45:21,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 19:45:53] 2026-03-08 00:45:21,953 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 19:45:53] 2026-03-08 00:45:21,953 | INFO     | update_server=False
[2026-03-07 19:45:53] 2026-03-08 00:45:21,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 19:45:53] 2026-03-08 00:45:21,982 | WARNING  | process 2813062 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 19:45:53] 2026-03-08 00:45:22,006 | INFO     | all job control threads have been joined
[2026-03-07 19:45:53] 2026-03-08 00:45:22,349 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/87/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:45:53] 2026-03-08 00:45:22,350 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/87/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:45:53] 2026-03-08 00:45:22,351 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-07 19:45:53] 2026-03-08 00:45:22,351 | WARNING  | maxPSS not found in memory monitor output
[2026-03-07 19:45:53] 2026-03-08 00:45:22,351 | INFO     | skipping file size check of payload stdout file (/home/whitlerd/Desktop/BOINC/slots/87/PanDA_Pilot-7039181238/payload.stdout) since it has not been created yet
[2026-03-07 19:45:53] 2026-03-08 00:45:22,352 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/87
[2026-03-07 19:45:53] 2026-03-08 00:45:22,358 | INFO     | all payload control threads have been joined
[2026-03-07 19:45:53] 2026-03-08 00:45:22,371 | INFO     | sufficient remaining disk space (379812052992 B)
[2026-03-07 19:45:53] 2026-03-08 00:45:22,372 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-07 19:45:53] 2026-03-08 00:45:22,372 | INFO     | output file size check: skipping output file /home/whitlerd/Desktop/BOINC/slots/87/PanDA_Pilot-7039181238/HITS.48955006._018800.pool.root.1 since it does not exist
[2026-03-07 19:45:53] 2026-03-08 00:45:22,461 | INFO     | all data control threads have been joined
[2026-03-07 19:45:53] 2026-03-08 00:45:22,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 19:45:53] 2026-03-08 00:45:22,877 | INFO     | number of running child processes to parent process 2813062: 1
[2026-03-07 19:45:53] 2026-03-08 00:45:22,877 | INFO     | maximum number of monitored processes: 6
[2026-03-07 19:45:53] 2026-03-08 00:45:22,877 | INFO     | aborting job monitoring since job object (job id=7039181238) has expired
[2026-03-07 19:45:53] 2026-03-08 00:45:22,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:45:53] 2026-03-08 00:45:22,877 | INFO     | will abort loop
[2026-03-07 19:45:53] 2026-03-08 00:45:22,958 | INFO     | [job] retrieve thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:23,011 | INFO     | [job] control thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:23,041 | INFO     | [data] copytool_in thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:23,128 | INFO     | [payload] validate_post thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:23,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 19:45:53] 2026-03-08 00:45:23,364 | INFO     | [payload] control thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:23,466 | INFO     | [data] control thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:23,766 | INFO     | [job] validate thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:23,876 | INFO     | [payload] failed_post thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:23,883 | INFO     | [job] job monitor thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:24,023 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:24,075 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:24,079 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:24,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:45:53] 2026-03-08 00:45:24,774 | INFO     | [data] copytool_out thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:25,699 | INFO     | [job] queue monitor thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:27,368 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:32,858 | INFO     | job.realtimelogging is not enabled
[2026-03-07 19:45:53] 2026-03-08 00:45:33,379 | INFO     | [monitor] cgroup control has ended
[2026-03-07 19:45:53] 2026-03-08 00:45:33,863 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 19:45:53] 2026-03-08 00:45:35,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137870142334784)>', '<ExcThread(monitor, started 137869515548416)>']
[2026-03-07 19:45:53] 2026-03-08 00:45:40,199 | INFO     | all workflow threads have been joined
[2026-03-07 19:45:53] 2026-03-08 00:45:40,199 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 19:45:53] 2026-03-08 00:45:40,199 | INFO     | traces error code: 0
[2026-03-07 19:45:53] 2026-03-08 00:45:40,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 19:45:53] 2026-03-08 00:45:53,218 | INFO     | PID=2808088 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 19:45:53] 2026-03-08 00:45:53,218 | INFO     | .. there are 3 such processes running
[2026-03-07 19:45:53] 2026-03-08 00:45:53,219 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 19:45:53] 2026-03-08 00:45:53,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 19:45:53] 2026-03-08 00:45:53,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 19:45:53] 2026-03-08 00:45:53,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 19:45:53] 2026-03-08 00:45:53,219 | INFO     | [monitor] control thread has ended
[2026-03-07 19:45:53] 2026-03-08 00:45:53,367 [wrapper] ==== pilot stdout END ====
[2026-03-07 19:45:53] 2026-03-08 00:45:53,370 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 19:45:53] 2026-03-08 00:45:53,373 [wrapper] pilotpid: 2808088
[2026-03-07 19:45:53] 2026-03-08 00:45:53,378 [wrapper] Pilot exit status: 0
[2026-03-07 19:45:53] 2026-03-08 00:45:53,389 [wrapper] pandaids: 7039181238
[2026-03-07 19:45:53] 2026-03-08 00:45:53,464 [wrapper] cleanup supervisor_pilot 2868691 2808089
[2026-03-07 19:45:53] 2026-03-08 00:45:53,470 [wrapper] Test setup, not cleaning
[2026-03-07 19:45:53] 2026-03-08 00:45:53,473 [wrapper] apfmon messages muted
[2026-03-07 19:45:53] 2026-03-08 00:45:53,475 [wrapper] ==== wrapper stdout END ====
[2026-03-07 19:45:53] 2026-03-08 00:45:53,478 [wrapper] ==== wrapper stderr END ====
[2026-03-07 19:45:53]  *** Error codes and diagnostics ***
[2026-03-07 19:45:53]     "exeErrorCode": 0,
[2026-03-07 19:45:53]     "exeErrorDiag": "",
[2026-03-07 19:45:53]     "pilotErrorCode": 0,
[2026-03-07 19:45:53]     "pilotErrorDiag": "",
[2026-03-07 19:45:53]  *** Listing of results directory ***
[2026-03-07 19:45:53] total 632412
[2026-03-07 19:45:53] -rw-r--r-- 1 whitlerd whitlerd    602657 Feb  3 06:11 pilot3.tar.gz
[2026-03-07 19:45:53] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 12:37 runpilot2-wrapper.sh
[2026-03-07 19:45:53] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 12:37 queuedata.json
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 17:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 19:45:53] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 17:15 run_atlas
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 17:15 job.xml
[2026-03-07 19:45:53] -rw-r--r-- 2 whitlerd whitlerd 448707322 Mar  7 17:15 EVNT.46701403._000376.pool.root.1
[2026-03-07 19:45:53] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 17:15 start_atlas.sh
[2026-03-07 19:45:53] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 17:15 shared
[2026-03-07 19:45:53] -rw-r--r-- 2 whitlerd whitlerd    616308 Mar  7 17:15 input.tar.gz
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar  7 17:15 init_data.xml
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 17:15 boinc_setup_complete
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 17:15 boinc_lockfile
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd      2564 Mar  7 17:15 pandaJob.out
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd    999169 Mar  7 17:16 agis_schedconf.cvmfs.json
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 17:16 agis_ddmendpoints.agis.ALL.json
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd       421 Mar  7 17:16 workernode_map.json
[2026-03-07 19:45:53] drwx------ 7 whitlerd whitlerd      4096 Mar  7 17:16 pilot3
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd 191637333 Mar  7 19:44 HITS.48955006._018800.pool.root.1
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  7 19:44 boinc_task_state.xml
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd      1022 Mar  7 19:45 memory_monitor_summary.json
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd    364554 Mar  7 19:45 log.48955006._018800.job.log.tgz.1
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd      6285 Mar  7 19:45 heartbeat.json
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 19:45 boinc_mmap_file
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  7 19:45 wrapper_checkpoint.txt
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd        95 Mar  7 19:45 pilot_heartbeat.json
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd       823 Mar  7 19:45 pilotlog.txt
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd   1266166 Mar  7 19:45 log.48955006._018800.job.log.1
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd       357 Mar  7 19:45 output.list
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 19:45 runtime_log
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd   1648640 Mar  7 19:45 result.tar.gz
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  7 19:45 runtime_log.err
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd       648 Mar  7 19:45 AVHODmOlAJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzdWLDmx4JDFo.diag
[2026-03-07 19:45:53] -rw-rw-r-- 1 whitlerd whitlerd     21590 Mar  7 19:45 stderr.txt
[2026-03-07 19:45:53] HITS file was successfully produced:
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd 191637333 Mar  7 19:44 shared/HITS.pool.root.1
[2026-03-07 19:45:53]  *** Contents of shared directory: ***
[2026-03-07 19:45:53] total 627580
[2026-03-07 19:45:53] -rw-r--r-- 2 whitlerd whitlerd 448707322 Mar  7 17:15 ATLAS.root_0
[2026-03-07 19:45:53] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 17:15 start_atlas.sh
[2026-03-07 19:45:53] -rw-r--r-- 2 whitlerd whitlerd    616308 Mar  7 17:15 input.tar.gz
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd 191637333 Mar  7 19:44 HITS.pool.root.1
[2026-03-07 19:45:53] -rw------- 1 whitlerd whitlerd   1648640 Mar  7 19:45 result.tar.gz
19:45:54 (2803532): run_atlas exited; CPU time 34796.451295
19:45:54 (2803532): called boinc_finish(0)

</stderr_txt>
]]>

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